RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 MTA3Q9BTC8 594 aa21.74■■□□□ 1.07
PKD1-229ENST00000564890 CPVLQ9H3G5 476 aa21.74■■□□□ 1.07
PKD1-229ENST00000564890 FBXO40Q9UH90 709 aa21.74■■□□□ 1.07
PKD1-229ENST00000564890 CCPG1Q9ULG6 757 aa21.74■■□□□ 1.07
PKD1-229ENST00000564890 ICAM1P05362 532 aa21.73■■□□□ 1.07
PKD1-229ENST00000564890 PGK2P07205 417 aa21.73■■□□□ 1.07
PKD1-229ENST00000564890 ALAS1P13196 640 aa21.73■■□□□ 1.07
PKD1-229ENST00000564890 PRKAR2AP13861 404 aaKnown RBP21.73■■□□□ 1.07
PKD1-229ENST00000564890 EN2P19622 333 aaPredicted RBP21.73■■□□□ 1.07
PKD1-229ENST00000564890 RGS19P49795 217 aa21.73■■□□□ 1.07
PKD1-229ENST00000564890 TKFCQ3LXA3 575 aa21.73■■□□□ 1.07
PKD1-229ENST00000564890 TSGA10IPQ3SY00 556 aa21.73■■□□□ 1.07
PKD1-229ENST00000564890 MFSD14CQ5VZR4 134 aa21.73■■□□□ 1.07
PKD1-229ENST00000564890 TMEM87BQ96K49 555 aa21.73■■□□□ 1.07
PKD1-229ENST00000564890 NEK1Q96PY6 1258 aa21.73■■□□□ 1.07
PKD1-229ENST00000564890 LY9Q9HBG7 655 aa21.73■■□□□ 1.07
PKD1-229ENST00000564890 GPHNQ9NQX3 736 aaPredicted RBP21.73■■□□□ 1.07
PKD1-229ENST00000564890 RNF146Q9NTX7 359 aa21.73■■□□□ 1.07
PKD1-229ENST00000564890 RBBP6Q7Z6E9 1792 aaKnown RBP21.73■■□□□ 1.07
PKD1-229ENST00000564890 GJB1P08034 283 aa21.72■■□□□ 1.07
PKD1-229ENST00000564890 TAL1P17542 331 aaPredicted RBP21.72■■□□□ 1.07
PKD1-229ENST00000564890 HSPA4P34932 840 aa21.72■■□□□ 1.07
PKD1-229ENST00000564890 CACNB2Q08289 660 aaPredicted RBP21.72■■□□□ 1.07
PKD1-229ENST00000564890 KRT32Q14532 448 aa21.72■■□□□ 1.07
PKD1-229ENST00000564890 MAP3K21Q5TCX8 1036 aa21.72■■□□□ 1.07
PKD1-229ENST00000564890 OLFML2BQ68BL8 750 aa21.72■■□□□ 1.07
PKD1-229ENST00000564890 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.72■■□□□ 1.07
PKD1-229ENST00000564890 CATIPQ7Z7H3 387 aa21.72■■□□□ 1.07
PKD1-229ENST00000564890 DDX11Q96FC9 970 aa21.72■■□□□ 1.07
PKD1-229ENST00000564890 TRERF1Q96PN7 1200 aa21.72■■□□□ 1.07
PKD1-229ENST00000564890 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.72■■□□□ 1.07
PKD1-229ENST00000564890 ACAD9Q9H845 621 aa21.72■■□□□ 1.07
PKD1-229ENST00000564890 HMX1Q9NP08 348 aaPredicted RBP21.72■■□□□ 1.07
PKD1-229ENST00000564890 RPTORQ8N122 1335 aa21.72■■□□□ 1.07
PKD1-229ENST00000564890 ZNFX1Q9P2E3 1918 aaKnown RBP21.72■■□□□ 1.07
PKD1-229ENST00000564890 SH2B2O14492 632 aaPredicted RBP21.71■■□□□ 1.07
PKD1-229ENST00000564890 ADCK5Q3MIX3 580 aa21.71■■□□□ 1.07
PKD1-229ENST00000564890 ADGRF4Q8IZF3 695 aa21.71■■□□□ 1.07
PKD1-229ENST00000564890 ANKRD35Q8N283 1001 aa21.71■■□□□ 1.07
PKD1-229ENST00000564890 STAG2Q8N3U4 1231 aa21.71■■□□□ 1.07
PKD1-229ENST00000564890 KCNB2Q92953 911 aa21.71■■□□□ 1.07
PKD1-229ENST00000564890 MAML3Q96JK9 1138 aa21.71■■□□□ 1.07
PKD1-229ENST00000564890 LRRC2Q9BYS8 371 aa21.71■■□□□ 1.07
PKD1-229ENST00000564890 PAK6Q9NQU5 681 aaPredicted RBP21.71■■□□□ 1.07
PKD1-229ENST00000564890 MAD2L2Q9UI95 211 aa21.71■■□□□ 1.07
PKD1-229ENST00000564890 DHX16O60231 1041 aaKnown RBP21.7■■□□□ 1.06
PKD1-229ENST00000564890 CYP2C19P33261 490 aa21.7■■□□□ 1.06
PKD1-229ENST00000564890 GRM4Q14833 912 aa21.7■■□□□ 1.06
PKD1-229ENST00000564890 ZNF792Q3KQV3 632 aa21.7■■□□□ 1.06
PKD1-229ENST00000564890 NFXL1Q6ZNB6 911 aa21.7■■□□□ 1.06
PKD1-229ENST00000564890 DEFB118Q96PH6 123 aa21.7■■□□□ 1.06
PKD1-229ENST00000564890 PALM3A6NDB9 673 aaPredicted RBP21.69■■□□□ 1.06
PKD1-229ENST00000564890 KLRF2D3W0D1 207 aa21.69■■□□□ 1.06
PKD1-229ENST00000564890 IGHA2P01877 340 aa21.69■■□□□ 1.06
PKD1-229ENST00000564890 GJA8P48165 433 aa21.69■■□□□ 1.06
PKD1-229ENST00000564890 TROAPQ12815 778 aa21.69■■□□□ 1.06
PKD1-229ENST00000564890 CDC37Q16543 378 aaPredicted RBP21.69■■□□□ 1.06
PKD1-229ENST00000564890 MUM1L1Q5H9M0 696 aa21.69■■□□□ 1.06
PKD1-229ENST00000564890 ZNF654Q8IZM8 581 aa21.69■■□□□ 1.06
PKD1-229ENST00000564890 TMTC2Q8N394 836 aa21.69■■□□□ 1.06
PKD1-229ENST00000564890 NUP133Q8WUM0 1156 aa21.69■■□□□ 1.06
PKD1-229ENST00000564890 VAT1LQ9HCJ6 419 aa21.69■■□□□ 1.06
PKD1-229ENST00000564890 PNMA2Q9UL42 364 aa21.69■■□□□ 1.06
PKD1-229ENST00000564890 DIS3Q9Y2L1 958 aaKnown RBP21.69■■□□□ 1.06
PKD1-229ENST00000564890 SNX14Q9Y5W7 946 aa21.69■■□□□ 1.06
PKD1-229ENST00000564890 DNAJC25-GNG10A0A024R161 153 aa21.68■■□□□ 1.06
PKD1-229ENST00000564890 CCDC69A6NI79 296 aa21.68■■□□□ 1.06
PKD1-229ENST00000564890 EPB41L2O43491 1005 aaKnown RBP21.68■■□□□ 1.06
PKD1-229ENST00000564890 DDAH1O94760 285 aa21.68■■□□□ 1.06
PKD1-229ENST00000564890 CCND3P30281 292 aaPredicted RBP21.68■■□□□ 1.06
PKD1-229ENST00000564890 LIFRP42702 1097 aa21.68■■□□□ 1.06
PKD1-229ENST00000564890 DHX32Q7L7V1 743 aaKnown RBP21.68■■□□□ 1.06
PKD1-229ENST00000564890 U2AF1L4Q8WU68 220 aaKnown RBP21.68■■□□□ 1.06
PKD1-229ENST00000564890 MYL10Q9BUA6 226 aa21.68■■□□□ 1.06
PKD1-229ENST00000564890 A1CFQ9NQ94 594 aaKnown RBP21.68■■□□□ 1.06
PKD1-229ENST00000564890 WDR19Q8NEZ3 1342 aa21.68■■□□□ 1.06
PKD1-229ENST00000564890 SGPL1O95470 568 aa21.67■■□□□ 1.06
PKD1-229ENST00000564890 EXOSC10Q01780 885 aaKnown RBP21.67■■□□□ 1.06
PKD1-229ENST00000564890 SHISA4Q96DD7 197 aa21.67■■□□□ 1.06
PKD1-229ENST00000564890 TCEANC2Q96MN5 208 aa21.67■■□□□ 1.06
PKD1-229ENST00000564890 JAKMIP1Q96N16 626 aaKnown RBP21.67■■□□□ 1.06
PKD1-229ENST00000564890 USP26Q9BXU7 913 aa21.67■■□□□ 1.06
PKD1-229ENST00000564890 JMJD4Q9H9V9 463 aa21.67■■□□□ 1.06
PKD1-229ENST00000564890 SMCHD1A6NHR9 2005 aa21.67■■□□□ 1.06
PKD1-229ENST00000564890 PLXNA1Q9UIW2 1896 aa21.66■■□□□ 1.06
PKD1-229ENST00000564890 PFASO15067 1338 aa21.66■■□□□ 1.06
PKD1-229ENST00000564890 HMGB1P09429 215 aaKnown RBP21.66■■□□□ 1.06
PKD1-229ENST00000564890 MLLT1Q03111 559 aaPredicted RBP21.66■■□□□ 1.06
PKD1-229ENST00000564890 USH1GQ495M9 461 aa21.66■■□□□ 1.06
PKD1-229ENST00000564890 NSMFQ6X4W1 530 aa21.66■■□□□ 1.06
PKD1-229ENST00000564890 POTEB2H3BUK9 544 aa21.65■■□□□ 1.06
PKD1-229ENST00000564890 NFIBO00712 420 aa21.65■■□□□ 1.06
PKD1-229ENST00000564890 TFRCP02786 760 aaKnown RBP21.65■■□□□ 1.06
PKD1-229ENST00000564890 CYBAP13498 195 aa21.65■■□□□ 1.06
PKD1-229ENST00000564890 QRICH1Q2TAL8 776 aa21.65■■□□□ 1.06
PKD1-229ENST00000564890 TRPV1Q8NER1 839 aa21.65■■□□□ 1.06
PKD1-229ENST00000564890 CTCFLQ8NI51 663 aaPredicted RBP21.65■■□□□ 1.06
PKD1-229ENST00000564890 MAP3K14Q99558 947 aa21.65■■□□□ 1.06
PKD1-229ENST00000564890 TINF2Q9BSI4 451 aa21.65■■□□□ 1.06
PKD1-229ENST00000564890 SLC12A7Q9Y666 1083 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms