RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 UBAC1Q9BSL1 405 aa22.7■■□□□ 1.22
TMEM249-202ENST00000562477 CPVLQ9H3G5 476 aa22.7■■□□□ 1.22
TMEM249-202ENST00000562477 KAT14Q9H8E8 782 aa22.7■■□□□ 1.22
TMEM249-202ENST00000562477 SEC23AQ15436 765 aa22.69■■□□□ 1.22
TMEM249-202ENST00000562477 ANO2Q9NQ90 1003 aa22.69■■□□□ 1.22
TMEM249-202ENST00000562477 RNF146Q9NTX7 359 aa22.69■■□□□ 1.22
TMEM249-202ENST00000562477 SLC5A4Q9NY91 659 aa22.69■■□□□ 1.22
TMEM249-202ENST00000562477 CDC45O75419 566 aa22.68■■□□□ 1.22
TMEM249-202ENST00000562477 ALAS1P13196 640 aa22.68■■□□□ 1.22
TMEM249-202ENST00000562477 CYBAP13498 195 aa22.68■■□□□ 1.22
TMEM249-202ENST00000562477 TRDNQ13061 729 aa22.68■■□□□ 1.22
TMEM249-202ENST00000562477 COL9A3Q14050 684 aaPredicted RBP22.68■■□□□ 1.22
TMEM249-202ENST00000562477 LHX8Q68G74 356 aa22.68■■□□□ 1.22
TMEM249-202ENST00000562477 CHST3Q7LGC8 479 aa22.68■■□□□ 1.22
TMEM249-202ENST00000562477 CHST13Q8NET6 341 aa22.68■■□□□ 1.22
TMEM249-202ENST00000562477 UBA5Q9GZZ9 404 aa22.68■■□□□ 1.22
TMEM249-202ENST00000562477 RANBP17Q9H2T7 1088 aaKnown RBP22.68■■□□□ 1.22
TMEM249-202ENST00000562477 SENP2Q9HC62 589 aa22.68■■□□□ 1.22
TMEM249-202ENST00000562477 SMCHD1A6NHR9 2005 aa22.68■■□□□ 1.22
TMEM249-202ENST00000562477 DNAJC25-GNG10A0A024R161 153 aa22.67■■□□□ 1.22
TMEM249-202ENST00000562477 SLC27A2O14975 620 aa22.67■■□□□ 1.22
TMEM249-202ENST00000562477 CNGA1P29973 690 aa22.67■■□□□ 1.22
TMEM249-202ENST00000562477 MUM1L1Q5H9M0 696 aa22.67■■□□□ 1.22
TMEM249-202ENST00000562477 IFIT1BQ5T764 474 aaKnown RBP22.67■■□□□ 1.22
TMEM249-202ENST00000562477 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.67■■□□□ 1.22
TMEM249-202ENST00000562477 DDX11Q96FC9 970 aa22.67■■□□□ 1.22
TMEM249-202ENST00000562477 PPP4R2Q9NY27 417 aa22.67■■□□□ 1.22
TMEM249-202ENST00000562477 CCPG1Q9ULG6 757 aa22.67■■□□□ 1.22
TMEM249-202ENST00000562477 MNX1P50219 401 aaPredicted RBP22.66■■□□□ 1.22
TMEM249-202ENST00000562477 ANTXR2P58335 489 aa22.66■■□□□ 1.22
TMEM249-202ENST00000562477 RALYLQ86SE5 291 aaKnown RBP22.66■■□□□ 1.22
TMEM249-202ENST00000562477 ANKRD35Q8N283 1001 aa22.66■■□□□ 1.22
TMEM249-202ENST00000562477 NCOA7Q8NI08 942 aa22.66■■□□□ 1.22
TMEM249-202ENST00000562477 FGD4Q96M96 766 aa22.66■■□□□ 1.22
TMEM249-202ENST00000562477 TRERF1Q96PN7 1200 aa22.66■■□□□ 1.22
TMEM249-202ENST00000562477 ACAD9Q9H845 621 aa22.66■■□□□ 1.22
TMEM249-202ENST00000562477 FBXO40Q9UH90 709 aa22.66■■□□□ 1.22
TMEM249-202ENST00000562477 OGDHLQ9ULD0 1010 aa22.66■■□□□ 1.22
TMEM249-202ENST00000562477 CEP290O15078 2479 aa22.66■■□□□ 1.22
TMEM249-202ENST00000562477 IFIT3O14879 490 aaKnown RBP22.65■■□□□ 1.22
TMEM249-202ENST00000562477 ICAM1P05362 532 aa22.65■■□□□ 1.22
TMEM249-202ENST00000562477 ANO1Q5XXA6 986 aa22.65■■□□□ 1.22
TMEM249-202ENST00000562477 CREB3L3Q68CJ9 461 aa22.65■■□□□ 1.22
TMEM249-202ENST00000562477 MB21D2Q8IYB1 491 aaPredicted RBP22.65■■□□□ 1.22
TMEM249-202ENST00000562477 PAWRQ96IZ0 340 aaKnown RBP22.65■■□□□ 1.22
TMEM249-202ENST00000562477 A1CFQ9NQ94 594 aaKnown RBP22.65■■□□□ 1.22
TMEM249-202ENST00000562477 DIS3Q9Y2L1 958 aaKnown RBP22.65■■□□□ 1.22
TMEM249-202ENST00000562477 CNTN2Q02246 1040 aa22.64■■□□□ 1.21
TMEM249-202ENST00000562477 TKFCQ3LXA3 575 aa22.64■■□□□ 1.21
TMEM249-202ENST00000562477 GPATCH4Q5T3I0 446 aaKnown RBP22.64■■□□□ 1.21
TMEM249-202ENST00000562477 TINF2Q9BSI4 451 aa22.64■■□□□ 1.21
TMEM249-202ENST00000562477 GPHNQ9NQX3 736 aaPredicted RBP22.64■■□□□ 1.21
TMEM249-202ENST00000562477 DDX20Q9UHI6 824 aaKnown RBP22.64■■□□□ 1.21
TMEM249-202ENST00000562477 PLXNA1Q9UIW2 1896 aa22.63■■□□□ 1.21
TMEM249-202ENST00000562477 NECTIN1Q15223 517 aa22.63■■□□□ 1.21
TMEM249-202ENST00000562477 PARP1P09874 1014 aaKnown RBP22.62■■□□□ 1.21
TMEM249-202ENST00000562477 ASPRV1Q53RT3 343 aa22.62■■□□□ 1.21
TMEM249-202ENST00000562477 STAG2Q8N3U4 1231 aa22.62■■□□□ 1.21
TMEM249-202ENST00000562477 NFIBO00712 420 aa22.61■■□□□ 1.21
TMEM249-202ENST00000562477 SNAI1O95863 264 aaPredicted RBP22.61■■□□□ 1.21
TMEM249-202ENST00000562477 WTAPQ15007 396 aa22.61■■□□□ 1.21
TMEM249-202ENST00000562477 TMEM67Q5HYA8 995 aa22.61■■□□□ 1.21
TMEM249-202ENST00000562477 CASC1Q6TDU7 716 aa22.61■■□□□ 1.21
TMEM249-202ENST00000562477 NSMFQ6X4W1 530 aa22.61■■□□□ 1.21
TMEM249-202ENST00000562477 ANKLE1Q8NAG6 615 aa22.61■■□□□ 1.21
TMEM249-202ENST00000562477 IGDCC4Q8TDY8 1250 aa22.61■■□□□ 1.21
TMEM249-202ENST00000562477 DDX49Q9Y6V7 483 aaKnown RBP22.61■■□□□ 1.21
TMEM249-202ENST00000562477 POTEB2H3BUK9 544 aa22.6■■□□□ 1.21
TMEM249-202ENST00000562477 SEPT4O43236 478 aa22.6■■□□□ 1.21
TMEM249-202ENST00000562477 ERICH6BQ5W0A0 696 aa22.6■■□□□ 1.21
TMEM249-202ENST00000562477 ADGRF4Q8IZF3 695 aa22.6■■□□□ 1.21
TMEM249-202ENST00000562477 FAM133AQ8N9E0 248 aa22.6■■□□□ 1.21
TMEM249-202ENST00000562477 PURBQ96QR8 312 aaKnown RBP22.6■■□□□ 1.21
TMEM249-202ENST00000562477 ASTN1O14525 1302 aa22.59■■□□□ 1.21
TMEM249-202ENST00000562477 ERICH2A1L162 156 aa22.59■■□□□ 1.21
TMEM249-202ENST00000562477 SOWAHBA6NEL2 793 aa22.59■■□□□ 1.21
TMEM249-202ENST00000562477 PRC1O43663 620 aa22.59■■□□□ 1.21
TMEM249-202ENST00000562477 ZNF865P0CJ78 1059 aaPredicted RBP22.59■■□□□ 1.21
TMEM249-202ENST00000562477 CAPN2P17655 700 aa22.59■■□□□ 1.21
TMEM249-202ENST00000562477 CDC37Q16543 378 aaPredicted RBP22.59■■□□□ 1.21
TMEM249-202ENST00000562477 SLC35G1Q2M3R5 365 aa22.59■■□□□ 1.21
TMEM249-202ENST00000562477 PRPF38BQ5VTL8 546 aaKnown RBP22.59■■□□□ 1.21
TMEM249-202ENST00000562477 NECAB2Q7Z6G3 386 aa22.59■■□□□ 1.21
TMEM249-202ENST00000562477 CLEC4DQ8WXI8 215 aa22.59■■□□□ 1.21
TMEM249-202ENST00000562477 LENG1Q96BZ8 264 aaPredicted RBP22.59■■□□□ 1.21
TMEM249-202ENST00000562477 VAT1LQ9HCJ6 419 aa22.59■■□□□ 1.21
TMEM249-202ENST00000562477 CYP39A1Q9NYL5 469 aa22.59■■□□□ 1.21
TMEM249-202ENST00000562477 MAD2L2Q9UI95 211 aa22.59■■□□□ 1.21
TMEM249-202ENST00000562477 MCM3APO60318 1980 aa22.58■■□□□ 1.21
TMEM249-202ENST00000562477 SART3Q15020 963 aaKnown RBP22.58■■□□□ 1.21
TMEM249-202ENST00000562477 USH1GQ495M9 461 aa22.58■■□□□ 1.21
TMEM249-202ENST00000562477 MAMDC4Q6UXC1 1216 aa22.58■■□□□ 1.21
TMEM249-202ENST00000562477 ZNF467Q7Z7K2 595 aaPredicted RBP22.58■■□□□ 1.21
TMEM249-202ENST00000562477 DPF3Q92784 378 aa22.58■■□□□ 1.21
TMEM249-202ENST00000562477 JMJD4Q9H9V9 463 aa22.58■■□□□ 1.21
TMEM249-202ENST00000562477 LY9Q9HBG7 655 aa22.58■■□□□ 1.21
TMEM249-202ENST00000562477 NRBP1Q9UHY1 535 aa22.58■■□□□ 1.21
TMEM249-202ENST00000562477 PFASO15067 1338 aa22.57■■□□□ 1.2
TMEM249-202ENST00000562477 WDR19Q8NEZ3 1342 aa22.57■■□□□ 1.2
TMEM249-202ENST00000562477 SYNGAP1Q96PV0 1343 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms