RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 HOMER2Q9NSB8 354 aa14.47□□□□□ -0.09
SYNE2-214ENST00000554928 SLC25A27O95847 323 aa14.46□□□□□ -0.09
SYNE2-214ENST00000554928 RGS2P41220 211 aa14.46□□□□□ -0.09
SYNE2-214ENST00000554928 TSGA10IPQ3SY00 556 aa14.46□□□□□ -0.09
SYNE2-214ENST00000554928 MUM1L1Q5H9M0 696 aa14.46□□□□□ -0.09
SYNE2-214ENST00000554928 PXYLP1Q8TE99 480 aa14.46□□□□□ -0.09
SYNE2-214ENST00000554928 NEK1Q96PY6 1258 aa14.46□□□□□ -0.09
SYNE2-214ENST00000554928 APBA2Q99767 749 aa14.46□□□□□ -0.09
SYNE2-214ENST00000554928 USP26Q9BXU7 913 aa14.46□□□□□ -0.09
SYNE2-214ENST00000554928 BIN2Q9UBW5 565 aaPredicted RBP14.46□□□□□ -0.09
SYNE2-214ENST00000554928 MAD2L2Q9UI95 211 aa14.46□□□□□ -0.09
SYNE2-214ENST00000554928 IVNS1ABPQ9Y6Y0 642 aa14.46□□□□□ -0.09
SYNE2-214ENST00000554928 SEC24BO95487 1268 aa14.45□□□□□ -0.1
SYNE2-214ENST00000554928 IGHA2P01877 340 aa14.45□□□□□ -0.1
SYNE2-214ENST00000554928 CCL5P13501 91 aa14.45□□□□□ -0.1
SYNE2-214ENST00000554928 RXRAP19793 462 aa14.45□□□□□ -0.1
SYNE2-214ENST00000554928 MCM5P33992 734 aa14.45□□□□□ -0.1
SYNE2-214ENST00000554928 EXOSC10Q01780 885 aaKnown RBP14.45□□□□□ -0.1
SYNE2-214ENST00000554928 TROAPQ12815 778 aa14.45□□□□□ -0.1
SYNE2-214ENST00000554928 RNF20Q5VTR2 975 aa14.45□□□□□ -0.1
SYNE2-214ENST00000554928 NBPF11Q86T75 865 aa14.45□□□□□ -0.1
SYNE2-214ENST00000554928 MMP19Q99542 508 aa14.45□□□□□ -0.1
SYNE2-214ENST00000554928 CTDP1Q9Y5B0 961 aaPredicted RBP14.45□□□□□ -0.1
SYNE2-214ENST00000554928 PALM3A6NDB9 673 aaPredicted RBP14.44□□□□□ -0.1
SYNE2-214ENST00000554928 REC8O95072 547 aa14.44□□□□□ -0.1
SYNE2-214ENST00000554928 HMGCRP04035 888 aa14.44□□□□□ -0.1
SYNE2-214ENST00000554928 HOXC6P09630 235 aa14.44□□□□□ -0.1
SYNE2-214ENST00000554928 PARP1P09874 1014 aaKnown RBP14.44□□□□□ -0.1
SYNE2-214ENST00000554928 FCER1AP12319 257 aa14.44□□□□□ -0.1
SYNE2-214ENST00000554928 XRCC5P13010 732 aaKnown RBP14.44□□□□□ -0.1
SYNE2-214ENST00000554928 ALAS1P13196 640 aa14.44□□□□□ -0.1
SYNE2-214ENST00000554928 ZKSCAN1P17029 563 aaPredicted RBP14.44□□□□□ -0.1
SYNE2-214ENST00000554928 EN2P19622 333 aaPredicted RBP14.44□□□□□ -0.1
SYNE2-214ENST00000554928 OAZ1P54368 228 aa14.44□□□□□ -0.1
SYNE2-214ENST00000554928 GRM4Q14833 912 aa14.44□□□□□ -0.1
SYNE2-214ENST00000554928 ASPRV1Q53RT3 343 aa14.44□□□□□ -0.1
SYNE2-214ENST00000554928 GPATCH4Q5T3I0 446 aaKnown RBP14.44□□□□□ -0.1
SYNE2-214ENST00000554928 ADGRF4Q8IZF3 695 aa14.44□□□□□ -0.1
SYNE2-214ENST00000554928 ZNF654Q8IZM8 581 aa14.44□□□□□ -0.1
SYNE2-214ENST00000554928 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
SYNE2-214ENST00000554928 FGD4Q96M96 766 aa14.44□□□□□ -0.1
SYNE2-214ENST00000554928 JAKMIP1Q96N16 626 aaKnown RBP14.44□□□□□ -0.1
SYNE2-214ENST00000554928 JMJD4Q9H9V9 463 aa14.44□□□□□ -0.1
SYNE2-214ENST00000554928 VAT1LQ9HCJ6 419 aa14.44□□□□□ -0.1
SYNE2-214ENST00000554928 RNF146Q9NTX7 359 aa14.44□□□□□ -0.1
SYNE2-214ENST00000554928 CCPG1Q9ULG6 757 aa14.44□□□□□ -0.1
SYNE2-214ENST00000554928 DDX49Q9Y6V7 483 aaKnown RBP14.44□□□□□ -0.1
SYNE2-214ENST00000554928 ERICH2A1L162 156 aa14.43□□□□□ -0.1
SYNE2-214ENST00000554928 STRNO43815 780 aa14.43□□□□□ -0.1
SYNE2-214ENST00000554928 ICAM1P05362 532 aa14.43□□□□□ -0.1
SYNE2-214ENST00000554928 PRKAR2AP13861 404 aaKnown RBP14.43□□□□□ -0.1
SYNE2-214ENST00000554928 CYP2C19P33261 490 aa14.43□□□□□ -0.1
SYNE2-214ENST00000554928 CACNB2Q08289 660 aaPredicted RBP14.43□□□□□ -0.1
SYNE2-214ENST00000554928 ZNF792Q3KQV3 632 aa14.43□□□□□ -0.1
SYNE2-214ENST00000554928 DPP9Q86TI2 863 aa14.43□□□□□ -0.1
SYNE2-214ENST00000554928 ABRAQ8N0Z2 381 aa14.43□□□□□ -0.1
SYNE2-214ENST00000554928 TRPV1Q8NER1 839 aa14.43□□□□□ -0.1
SYNE2-214ENST00000554928 NUP133Q8WUM0 1156 aa14.43□□□□□ -0.1
SYNE2-214ENST00000554928 SHISA4Q96DD7 197 aa14.43□□□□□ -0.1
SYNE2-214ENST00000554928 TRERF1Q96PN7 1200 aa14.43□□□□□ -0.1
SYNE2-214ENST00000554928 PURBQ96QR8 312 aaKnown RBP14.43□□□□□ -0.1
SYNE2-214ENST00000554928 ZNF236Q9UL36 1845 aa14.43□□□□□ -0.1
SYNE2-214ENST00000554928 DNAJC25-GNG10A0A024R161 153 aa14.42□□□□□ -0.1
SYNE2-214ENST00000554928 KLRF2D3W0D1 207 aa14.42□□□□□ -0.1
SYNE2-214ENST00000554928 NFIBO00712 420 aa14.42□□□□□ -0.1
SYNE2-214ENST00000554928 CYTH3O43739 400 aa14.42□□□□□ -0.1
SYNE2-214ENST00000554928 PPP1R11O60927 126 aaPredicted RBP14.42□□□□□ -0.1
SYNE2-214ENST00000554928 FDX1P10109 184 aa14.42□□□□□ -0.1
SYNE2-214ENST00000554928 CCND3P30281 292 aaPredicted RBP14.42□□□□□ -0.1
SYNE2-214ENST00000554928 SART3Q15020 963 aaKnown RBP14.42□□□□□ -0.1
SYNE2-214ENST00000554928 CDC37Q16543 378 aaPredicted RBP14.42□□□□□ -0.1
SYNE2-214ENST00000554928 QRICH1Q2TAL8 776 aa14.42□□□□□ -0.1
SYNE2-214ENST00000554928 PRAMEF19Q5SWL8 479 aa14.42□□□□□ -0.1
SYNE2-214ENST00000554928 MAP3K21Q5TCX8 1036 aa14.42□□□□□ -0.1
SYNE2-214ENST00000554928 DHX32Q7L7V1 743 aaKnown RBP14.42□□□□□ -0.1
SYNE2-214ENST00000554928 CCDC144CPQ8IYA2 1237 aa14.42□□□□□ -0.1
SYNE2-214ENST00000554928 CLEC4DQ8WXI8 215 aa14.42□□□□□ -0.1
SYNE2-214ENST00000554928 MAML3Q96JK9 1138 aa14.42□□□□□ -0.1
SYNE2-214ENST00000554928 TMEM87BQ96K49 555 aa14.42□□□□□ -0.1
SYNE2-214ENST00000554928 RNF208Q9H0X6 261 aa14.42□□□□□ -0.1
SYNE2-214ENST00000554928 A1CFQ9NQ94 594 aaKnown RBP14.42□□□□□ -0.1
SYNE2-214ENST00000554928 BRPF3Q9ULD4 1205 aa14.42□□□□□ -0.1
SYNE2-214ENST00000554928 SMCHD1A6NHR9 2005 aa14.42□□□□□ -0.1
SYNE2-214ENST00000554928 ASTN1O14525 1302 aa14.41□□□□□ -0.1
SYNE2-214ENST00000554928 PLEKHA8P1O95397 391 aa14.41□□□□□ -0.1
SYNE2-214ENST00000554928 COPB2P35606 906 aa14.41□□□□□ -0.1
SYNE2-214ENST00000554928 LIFRP42702 1097 aa14.41□□□□□ -0.1
SYNE2-214ENST00000554928 UBXN2AP68543 259 aa14.41□□□□□ -0.1
SYNE2-214ENST00000554928 CNTN2Q02246 1040 aa14.41□□□□□ -0.1
SYNE2-214ENST00000554928 KRT32Q14532 448 aa14.41□□□□□ -0.1
SYNE2-214ENST00000554928 KCTD2Q14681 263 aa14.41□□□□□ -0.1
SYNE2-214ENST00000554928 USH1GQ495M9 461 aa14.41□□□□□ -0.1
SYNE2-214ENST00000554928 C8orf34Q49A92 452 aa14.41□□□□□ -0.1
SYNE2-214ENST00000554928 NFXL1Q6ZNB6 911 aa14.41□□□□□ -0.1
SYNE2-214ENST00000554928 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.41□□□□□ -0.1
SYNE2-214ENST00000554928 CATIPQ7Z7H3 387 aa14.41□□□□□ -0.1
SYNE2-214ENST00000554928 CMTR1Q8N1G2 835 aaKnown RBP14.41□□□□□ -0.1
SYNE2-214ENST00000554928 CHST13Q8NET6 341 aa14.41□□□□□ -0.1
SYNE2-214ENST00000554928 MTA3Q9BTC8 594 aa14.41□□□□□ -0.1
SYNE2-214ENST00000554928 ACAD9Q9H845 621 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms