RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 SLC5A4Q9NY91 659 aa27.19■■□□□ 1.94
NEK9-203ENST00000553945 ALAS1P13196 640 aa27.18■■□□□ 1.94
NEK9-203ENST00000553945 CHST13Q8NET6 341 aa27.18■■□□□ 1.94
NEK9-203ENST00000553945 NEK1Q96PY6 1258 aa27.18■■□□□ 1.94
NEK9-203ENST00000553945 GPHNQ9NQX3 736 aaPredicted RBP27.18■■□□□ 1.94
NEK9-203ENST00000553945 FLRT1Q9NZU1 646 aa27.18■■□□□ 1.94
NEK9-203ENST00000553945 FBXO40Q9UH90 709 aa27.18■■□□□ 1.94
NEK9-203ENST00000553945 CCPG1Q9ULG6 757 aa27.18■■□□□ 1.94
NEK9-203ENST00000553945 PGK2P07205 417 aa27.17■■□□□ 1.94
NEK9-203ENST00000553945 KRT32Q14532 448 aa27.17■■□□□ 1.94
NEK9-203ENST00000553945 TSGA10IPQ3SY00 556 aa27.17■■□□□ 1.94
NEK9-203ENST00000553945 TMEM87BQ96K49 555 aa27.17■■□□□ 1.94
NEK9-203ENST00000553945 MTA3Q9BTC8 594 aa27.17■■□□□ 1.94
NEK9-203ENST00000553945 LY9Q9HBG7 655 aa27.17■■□□□ 1.94
NEK9-203ENST00000553945 RNF146Q9NTX7 359 aa27.17■■□□□ 1.94
NEK9-203ENST00000553945 ICAM1P05362 532 aa27.16■■□□□ 1.94
NEK9-203ENST00000553945 PRKAR2AP13861 404 aaKnown RBP27.16■■□□□ 1.94
NEK9-203ENST00000553945 HSPA4P34932 840 aa27.16■■□□□ 1.94
NEK9-203ENST00000553945 TKFCQ3LXA3 575 aa27.16■■□□□ 1.94
NEK9-203ENST00000553945 CATIPQ7Z7H3 387 aa27.16■■□□□ 1.94
NEK9-203ENST00000553945 DDX11Q96FC9 970 aa27.16■■□□□ 1.94
NEK9-203ENST00000553945 SH2B2O14492 632 aaPredicted RBP27.15■■□□□ 1.94
NEK9-203ENST00000553945 DHX16O60231 1041 aaKnown RBP27.15■■□□□ 1.94
NEK9-203ENST00000553945 TAL1P17542 331 aaPredicted RBP27.15■■□□□ 1.94
NEK9-203ENST00000553945 EN2P19622 333 aaPredicted RBP27.15■■□□□ 1.94
NEK9-203ENST00000553945 CACNB2Q08289 660 aaPredicted RBP27.15■■□□□ 1.94
NEK9-203ENST00000553945 ADCK5Q3MIX3 580 aa27.15■■□□□ 1.94
NEK9-203ENST00000553945 MFSD14CQ5VZR4 134 aa27.15■■□□□ 1.94
NEK9-203ENST00000553945 NFXL1Q6ZNB6 911 aa27.15■■□□□ 1.94
NEK9-203ENST00000553945 ANKRD35Q8N283 1001 aa27.15■■□□□ 1.94
NEK9-203ENST00000553945 STAG2Q8N3U4 1231 aa27.15■■□□□ 1.94
NEK9-203ENST00000553945 TRERF1Q96PN7 1200 aa27.15■■□□□ 1.94
NEK9-203ENST00000553945 LRRC2Q9BYS8 371 aa27.15■■□□□ 1.94
NEK9-203ENST00000553945 ACAD9Q9H845 621 aa27.15■■□□□ 1.94
NEK9-203ENST00000553945 HMX1Q9NP08 348 aaPredicted RBP27.15■■□□□ 1.94
NEK9-203ENST00000553945 PLXNA1Q9UIW2 1896 aa27.15■■□□□ 1.94
NEK9-203ENST00000553945 GJB1P08034 283 aa27.14■■□□□ 1.94
NEK9-203ENST00000553945 RGS19P49795 217 aa27.14■■□□□ 1.94
NEK9-203ENST00000553945 GRM4Q14833 912 aa27.14■■□□□ 1.94
NEK9-203ENST00000553945 MAP3K21Q5TCX8 1036 aa27.14■■□□□ 1.94
NEK9-203ENST00000553945 ADGRF4Q8IZF3 695 aa27.14■■□□□ 1.94
NEK9-203ENST00000553945 KCNB2Q92953 911 aa27.14■■□□□ 1.94
NEK9-203ENST00000553945 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.14■■□□□ 1.94
NEK9-203ENST00000553945 RPTORQ8N122 1335 aa27.14■■□□□ 1.93
NEK9-203ENST00000553945 KLRF2D3W0D1 207 aa27.13■■□□□ 1.93
NEK9-203ENST00000553945 CYP2C19P33261 490 aa27.13■■□□□ 1.93
NEK9-203ENST00000553945 TROAPQ12815 778 aa27.13■■□□□ 1.93
NEK9-203ENST00000553945 ZNF792Q3KQV3 632 aa27.13■■□□□ 1.93
NEK9-203ENST00000553945 OLFML2BQ68BL8 750 aa27.13■■□□□ 1.93
NEK9-203ENST00000553945 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.13■■□□□ 1.93
NEK9-203ENST00000553945 ZNF654Q8IZM8 581 aa27.13■■□□□ 1.93
NEK9-203ENST00000553945 TMTC2Q8N394 836 aa27.13■■□□□ 1.93
NEK9-203ENST00000553945 MAML3Q96JK9 1138 aa27.13■■□□□ 1.93
NEK9-203ENST00000553945 VAT1LQ9HCJ6 419 aa27.13■■□□□ 1.93
NEK9-203ENST00000553945 MAD2L2Q9UI95 211 aa27.13■■□□□ 1.93
NEK9-203ENST00000553945 SNX14Q9Y5W7 946 aa27.13■■□□□ 1.93
NEK9-203ENST00000553945 PALM3A6NDB9 673 aaPredicted RBP27.12■■□□□ 1.93
NEK9-203ENST00000553945 CCDC69A6NI79 296 aa27.12■■□□□ 1.93
NEK9-203ENST00000553945 MUM1L1Q5H9M0 696 aa27.12■■□□□ 1.93
NEK9-203ENST00000553945 DHX32Q7L7V1 743 aaKnown RBP27.12■■□□□ 1.93
NEK9-203ENST00000553945 NUP133Q8WUM0 1156 aa27.12■■□□□ 1.93
NEK9-203ENST00000553945 DEFB118Q96PH6 123 aa27.12■■□□□ 1.93
NEK9-203ENST00000553945 PAK6Q9NQU5 681 aaPredicted RBP27.12■■□□□ 1.93
NEK9-203ENST00000553945 EPB41L2O43491 1005 aaKnown RBP27.11■■□□□ 1.93
NEK9-203ENST00000553945 LIFRP42702 1097 aa27.11■■□□□ 1.93
NEK9-203ENST00000553945 CDC37Q16543 378 aaPredicted RBP27.11■■□□□ 1.93
NEK9-203ENST00000553945 TCEANC2Q96MN5 208 aa27.11■■□□□ 1.93
NEK9-203ENST00000553945 JAKMIP1Q96N16 626 aaKnown RBP27.11■■□□□ 1.93
NEK9-203ENST00000553945 MYL10Q9BUA6 226 aa27.11■■□□□ 1.93
NEK9-203ENST00000553945 PNMA2Q9UL42 364 aa27.11■■□□□ 1.93
NEK9-203ENST00000553945 DIS3Q9Y2L1 958 aaKnown RBP27.11■■□□□ 1.93
NEK9-203ENST00000553945 DNAJC25-GNG10A0A024R161 153 aa27.1■■□□□ 1.93
NEK9-203ENST00000553945 HMGB1P09429 215 aaKnown RBP27.1■■□□□ 1.93
NEK9-203ENST00000553945 GJA8P48165 433 aa27.1■■□□□ 1.93
NEK9-203ENST00000553945 USP26Q9BXU7 913 aa27.1■■□□□ 1.93
NEK9-203ENST00000553945 JMJD4Q9H9V9 463 aa27.1■■□□□ 1.93
NEK9-203ENST00000553945 A1CFQ9NQ94 594 aaKnown RBP27.1■■□□□ 1.93
NEK9-203ENST00000553945 WDR19Q8NEZ3 1342 aa27.1■■□□□ 1.93
NEK9-203ENST00000553945 SMCHD1A6NHR9 2005 aa27.09■■□□□ 1.93
NEK9-203ENST00000553945 DDAH1O94760 285 aa27.09■■□□□ 1.93
NEK9-203ENST00000553945 CCND3P30281 292 aaPredicted RBP27.09■■□□□ 1.93
NEK9-203ENST00000553945 EXOSC10Q01780 885 aaKnown RBP27.09■■□□□ 1.93
NEK9-203ENST00000553945 USH1GQ495M9 461 aa27.09■■□□□ 1.93
NEK9-203ENST00000553945 U2AF1L4Q8WU68 220 aaKnown RBP27.09■■□□□ 1.93
NEK9-203ENST00000553945 KIAA0100Q14667 2235 aaKnown RBP27.08■■□□□ 1.93
NEK9-203ENST00000553945 SGPL1O95470 568 aa27.08■■□□□ 1.93
NEK9-203ENST00000553945 IGHA2P01877 340 aa27.08■■□□□ 1.93
NEK9-203ENST00000553945 CPA1P15085 419 aa27.08■■□□□ 1.93
NEK9-203ENST00000553945 NSMFQ6X4W1 530 aa27.08■■□□□ 1.93
NEK9-203ENST00000553945 CTCFLQ8NI51 663 aaPredicted RBP27.08■■□□□ 1.93
NEK9-203ENST00000553945 PFASO15067 1338 aa27.08■■□□□ 1.93
NEK9-203ENST00000553945 POTEB2H3BUK9 544 aa27.07■■□□□ 1.92
NEK9-203ENST00000553945 TFRCP02786 760 aaKnown RBP27.07■■□□□ 1.92
NEK9-203ENST00000553945 CNGA1P29973 690 aa27.07■■□□□ 1.92
NEK9-203ENST00000553945 MLLT1Q03111 559 aaPredicted RBP27.07■■□□□ 1.92
NEK9-203ENST00000553945 QRICH1Q2TAL8 776 aa27.07■■□□□ 1.92
NEK9-203ENST00000553945 SHISA4Q96DD7 197 aa27.07■■□□□ 1.92
NEK9-203ENST00000553945 MAP3K14Q99558 947 aa27.07■■□□□ 1.92
NEK9-203ENST00000553945 TINF2Q9BSI4 451 aa27.07■■□□□ 1.92
NEK9-203ENST00000553945 SLC12A7Q9Y666 1083 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms