RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 DDX11Q96FC9 970 aa21.57■■□□□ 1.04
PRPF40B-216ENST00000552301 AGBL1Q96MI9 1066 aa21.57■■□□□ 1.04
PRPF40B-216ENST00000552301 UNC93B1Q9H1C4 597 aa21.57■■□□□ 1.04
PRPF40B-216ENST00000552301 ACAD9Q9H845 621 aa21.57■■□□□ 1.04
PRPF40B-216ENST00000552301 ICAM1P05362 532 aa21.56■■□□□ 1.04
PRPF40B-216ENST00000552301 PRKAR2AP13861 404 aaKnown RBP21.56■■□□□ 1.04
PRPF40B-216ENST00000552301 ANKRD35Q8N283 1001 aa21.56■■□□□ 1.04
PRPF40B-216ENST00000552301 TMTC2Q8N394 836 aa21.56■■□□□ 1.04
PRPF40B-216ENST00000552301 NPLOC4Q8TAT6 608 aa21.56■■□□□ 1.04
PRPF40B-216ENST00000552301 UBA5Q9GZZ9 404 aa21.56■■□□□ 1.04
PRPF40B-216ENST00000552301 HTTP42858 3142 aa21.56■■□□□ 1.04
PRPF40B-216ENST00000552301 RBBP6Q7Z6E9 1792 aaKnown RBP21.56■■□□□ 1.04
PRPF40B-216ENST00000552301 ZNF536O15090 1300 aa21.55■■□□□ 1.04
PRPF40B-216ENST00000552301 POTEFA5A3E0 1075 aa21.55■■□□□ 1.04
PRPF40B-216ENST00000552301 CCDC69A6NI79 296 aa21.55■■□□□ 1.04
PRPF40B-216ENST00000552301 EPB41L2O43491 1005 aaKnown RBP21.55■■□□□ 1.04
PRPF40B-216ENST00000552301 COBLO75128 1261 aa21.55■■□□□ 1.04
PRPF40B-216ENST00000552301 PGK2P07205 417 aa21.55■■□□□ 1.04
PRPF40B-216ENST00000552301 HSPA4P34932 840 aa21.55■■□□□ 1.04
PRPF40B-216ENST00000552301 TSGA10IPQ3SY00 556 aa21.55■■□□□ 1.04
PRPF40B-216ENST00000552301 RASEFQ8IZ41 740 aa21.55■■□□□ 1.04
PRPF40B-216ENST00000552301 IGDCC4Q8TDY8 1250 aa21.55■■□□□ 1.04
PRPF40B-216ENST00000552301 NUP133Q8WUM0 1156 aa21.55■■□□□ 1.04
PRPF40B-216ENST00000552301 TRERF1Q96PN7 1200 aa21.55■■□□□ 1.04
PRPF40B-216ENST00000552301 LY9Q9HBG7 655 aa21.55■■□□□ 1.04
PRPF40B-216ENST00000552301 HMX1Q9NP08 348 aaPredicted RBP21.55■■□□□ 1.04
PRPF40B-216ENST00000552301 RPTORQ8N122 1335 aa21.55■■□□□ 1.04
PRPF40B-216ENST00000552301 SH2B2O14492 632 aaPredicted RBP21.54■■□□□ 1.04
PRPF40B-216ENST00000552301 HMGB1P09429 215 aaKnown RBP21.54■■□□□ 1.04
PRPF40B-216ENST00000552301 TRIM32Q13049 653 aa21.54■■□□□ 1.04
PRPF40B-216ENST00000552301 GRM4Q14833 912 aa21.54■■□□□ 1.04
PRPF40B-216ENST00000552301 OLFML2BQ68BL8 750 aa21.54■■□□□ 1.04
PRPF40B-216ENST00000552301 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.54■■□□□ 1.04
PRPF40B-216ENST00000552301 CPVLQ9H3G5 476 aa21.54■■□□□ 1.04
PRPF40B-216ENST00000552301 SENP2Q9HC62 589 aa21.54■■□□□ 1.04
PRPF40B-216ENST00000552301 ZNFX1Q9P2E3 1918 aaKnown RBP21.54■■□□□ 1.04
PRPF40B-216ENST00000552301 EIF5BO60841 1220 aaKnown RBP21.53■■□□□ 1.04
PRPF40B-216ENST00000552301 DDAH1O94760 285 aa21.53■■□□□ 1.04
PRPF40B-216ENST00000552301 GJB1P08034 283 aa21.53■■□□□ 1.04
PRPF40B-216ENST00000552301 CDC37Q16543 378 aaPredicted RBP21.53■■□□□ 1.04
PRPF40B-216ENST00000552301 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.53■■□□□ 1.04
PRPF40B-216ENST00000552301 DHX32Q7L7V1 743 aaKnown RBP21.53■■□□□ 1.04
PRPF40B-216ENST00000552301 ZNF654Q8IZM8 581 aa21.53■■□□□ 1.04
PRPF40B-216ENST00000552301 CTCFLQ8NI51 663 aaPredicted RBP21.53■■□□□ 1.04
PRPF40B-216ENST00000552301 LRRC2Q9BYS8 371 aa21.53■■□□□ 1.04
PRPF40B-216ENST00000552301 FLRT1Q9NZU1 646 aa21.53■■□□□ 1.04
PRPF40B-216ENST00000552301 DIS3Q9Y2L1 958 aaKnown RBP21.53■■□□□ 1.04
PRPF40B-216ENST00000552301 WDR19Q8NEZ3 1342 aa21.53■■□□□ 1.04
PRPF40B-216ENST00000552301 KLRF2D3W0D1 207 aa21.52■■□□□ 1.04
PRPF40B-216ENST00000552301 KIF5BP33176 963 aa21.52■■□□□ 1.04
PRPF40B-216ENST00000552301 LIFRP42702 1097 aa21.52■■□□□ 1.04
PRPF40B-216ENST00000552301 FGD1P98174 961 aa21.52■■□□□ 1.04
PRPF40B-216ENST00000552301 CACNB2Q08289 660 aaPredicted RBP21.52■■□□□ 1.04
PRPF40B-216ENST00000552301 ADCK5Q3MIX3 580 aa21.52■■□□□ 1.04
PRPF40B-216ENST00000552301 ADGRF4Q8IZF3 695 aa21.52■■□□□ 1.04
PRPF40B-216ENST00000552301 MAML3Q96JK9 1138 aa21.52■■□□□ 1.04
PRPF40B-216ENST00000552301 JAKMIP1Q96N16 626 aaKnown RBP21.52■■□□□ 1.04
PRPF40B-216ENST00000552301 DEFB118Q96PH6 123 aa21.52■■□□□ 1.04
PRPF40B-216ENST00000552301 VAT1LQ9HCJ6 419 aa21.52■■□□□ 1.04
PRPF40B-216ENST00000552301 GPHNQ9NQX3 736 aaPredicted RBP21.52■■□□□ 1.04
PRPF40B-216ENST00000552301 PFASO15067 1338 aa21.52■■□□□ 1.03
PRPF40B-216ENST00000552301 EN2P19622 333 aaPredicted RBP21.51■■□□□ 1.03
PRPF40B-216ENST00000552301 CYP2C19P33261 490 aa21.51■■□□□ 1.03
PRPF40B-216ENST00000552301 TROAPQ12815 778 aa21.51■■□□□ 1.03
PRPF40B-216ENST00000552301 MAP3K21Q5TCX8 1036 aa21.51■■□□□ 1.03
PRPF40B-216ENST00000552301 NSMFQ6X4W1 530 aa21.51■■□□□ 1.03
PRPF40B-216ENST00000552301 SYNE3Q6ZMZ3 975 aa21.51■■□□□ 1.03
PRPF40B-216ENST00000552301 STAG2Q8N3U4 1231 aa21.51■■□□□ 1.03
PRPF40B-216ENST00000552301 U2AF1L4Q8WU68 220 aaKnown RBP21.51■■□□□ 1.03
PRPF40B-216ENST00000552301 KCNB2Q92953 911 aa21.51■■□□□ 1.03
PRPF40B-216ENST00000552301 MAD2L2Q9UI95 211 aa21.51■■□□□ 1.03
PRPF40B-216ENST00000552301 SNX14Q9Y5W7 946 aa21.51■■□□□ 1.03
PRPF40B-216ENST00000552301 SLC12A7Q9Y666 1083 aa21.51■■□□□ 1.03
PRPF40B-216ENST00000552301 PLXNA1Q9UIW2 1896 aa21.51■■□□□ 1.03
PRPF40B-216ENST00000552301 PALM3A6NDB9 673 aaPredicted RBP21.5■■□□□ 1.03
PRPF40B-216ENST00000552301 POTEB2H3BUK9 544 aa21.5■■□□□ 1.03
PRPF40B-216ENST00000552301 CALM1P0DP23 149 aa21.5■■□□□ 1.03
PRPF40B-216ENST00000552301 CALM2P0DP24 149 aa21.5■■□□□ 1.03
PRPF40B-216ENST00000552301 CALM3P0DP25 149 aa21.5■■□□□ 1.03
PRPF40B-216ENST00000552301 TAL1P17542 331 aaPredicted RBP21.5■■□□□ 1.03
PRPF40B-216ENST00000552301 PSMA5P28066 241 aa21.5■■□□□ 1.03
PRPF40B-216ENST00000552301 GJA8P48165 433 aa21.5■■□□□ 1.03
PRPF40B-216ENST00000552301 ZNF792Q3KQV3 632 aa21.5■■□□□ 1.03
PRPF40B-216ENST00000552301 USH1GQ495M9 461 aa21.5■■□□□ 1.03
PRPF40B-216ENST00000552301 BLOC1S2Q6QNY1 142 aa21.5■■□□□ 1.03
PRPF40B-216ENST00000552301 TCEANC2Q96MN5 208 aa21.5■■□□□ 1.03
PRPF40B-216ENST00000552301 MYL10Q9BUA6 226 aa21.5■■□□□ 1.03
PRPF40B-216ENST00000552301 A1CFQ9NQ94 594 aaKnown RBP21.5■■□□□ 1.03
PRPF40B-216ENST00000552301 PAK6Q9NQU5 681 aaPredicted RBP21.5■■□□□ 1.03
PRPF40B-216ENST00000552301 CNGA1P29973 690 aa21.49■■□□□ 1.03
PRPF40B-216ENST00000552301 COL9A3Q14050 684 aaPredicted RBP21.49■■□□□ 1.03
PRPF40B-216ENST00000552301 MUM1L1Q5H9M0 696 aa21.49■■□□□ 1.03
PRPF40B-216ENST00000552301 MAP3K14Q99558 947 aa21.49■■□□□ 1.03
PRPF40B-216ENST00000552301 JMJD4Q9H9V9 463 aa21.49■■□□□ 1.03
PRPF40B-216ENST00000552301 DNAJC25-GNG10A0A024R161 153 aa21.48■■□□□ 1.03
PRPF40B-216ENST00000552301 SGPL1O95470 568 aa21.48■■□□□ 1.03
PRPF40B-216ENST00000552301 GNAQP50148 359 aa21.48■■□□□ 1.03
PRPF40B-216ENST00000552301 MLLT1Q03111 559 aaPredicted RBP21.48■■□□□ 1.03
PRPF40B-216ENST00000552301 QRICH1Q2TAL8 776 aa21.48■■□□□ 1.03
PRPF40B-216ENST00000552301 TINF2Q9BSI4 451 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms