RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 MAD2L2Q9UI95 211 aa13.15□□□□□ -0.3
RAB5B-208ENST00000550283 ZNF236Q9UL36 1845 aa13.15□□□□□ -0.3
RAB5B-208ENST00000550283 ASTN1O14525 1302 aa13.14□□□□□ -0.31
RAB5B-208ENST00000550283 ZBED4O75132 1171 aa13.14□□□□□ -0.31
RAB5B-208ENST00000550283 CCL5P13501 91 aa13.14□□□□□ -0.31
RAB5B-208ENST00000550283 RXRAP19793 462 aa13.14□□□□□ -0.31
RAB5B-208ENST00000550283 CYP2C19P33261 490 aa13.14□□□□□ -0.31
RAB5B-208ENST00000550283 EXOSC10Q01780 885 aaKnown RBP13.14□□□□□ -0.31
RAB5B-208ENST00000550283 TROAPQ12815 778 aa13.14□□□□□ -0.31
RAB5B-208ENST00000550283 TRDNQ13061 729 aa13.14□□□□□ -0.31
RAB5B-208ENST00000550283 TSGA10IPQ3SY00 556 aa13.14□□□□□ -0.31
RAB5B-208ENST00000550283 SLAIN1Q8ND83 568 aa13.14□□□□□ -0.31
RAB5B-208ENST00000550283 PXYLP1Q8TE99 480 aa13.14□□□□□ -0.31
RAB5B-208ENST00000550283 CHURC1Q8WUH1 139 aa13.14□□□□□ -0.31
RAB5B-208ENST00000550283 APBA2Q99767 749 aa13.14□□□□□ -0.31
RAB5B-208ENST00000550283 USP26Q9BXU7 913 aa13.14□□□□□ -0.31
RAB5B-208ENST00000550283 MROH8Q9H579 483 aa13.14□□□□□ -0.31
RAB5B-208ENST00000550283 PALM3A6NDB9 673 aaPredicted RBP13.13□□□□□ -0.31
RAB5B-208ENST00000550283 CYTH3O43739 400 aa13.13□□□□□ -0.31
RAB5B-208ENST00000550283 PPP1R11O60927 126 aaPredicted RBP13.13□□□□□ -0.31
RAB5B-208ENST00000550283 HOXC6P09630 235 aa13.13□□□□□ -0.31
RAB5B-208ENST00000550283 CCND3P30281 292 aaPredicted RBP13.13□□□□□ -0.31
RAB5B-208ENST00000550283 RGS2P41220 211 aa13.13□□□□□ -0.31
RAB5B-208ENST00000550283 CNTN2Q02246 1040 aa13.13□□□□□ -0.31
RAB5B-208ENST00000550283 CACNB2Q08289 660 aaPredicted RBP13.13□□□□□ -0.31
RAB5B-208ENST00000550283 WTAPQ15007 396 aa13.13□□□□□ -0.31
RAB5B-208ENST00000550283 ZNF792Q3KQV3 632 aa13.13□□□□□ -0.31
RAB5B-208ENST00000550283 PPP4R3BQ5MIZ7 849 aa13.13□□□□□ -0.31
RAB5B-208ENST00000550283 PRAMEF19Q5SWL8 479 aa13.13□□□□□ -0.31
RAB5B-208ENST00000550283 MAP3K21Q5TCX8 1036 aa13.13□□□□□ -0.31
RAB5B-208ENST00000550283 CASC1Q6TDU7 716 aa13.13□□□□□ -0.31
RAB5B-208ENST00000550283 CCAR1Q8IX12 1150 aaKnown RBP13.13□□□□□ -0.31
RAB5B-208ENST00000550283 ADGRF4Q8IZF3 695 aa13.13□□□□□ -0.31
RAB5B-208ENST00000550283 SOCS4Q8WXH5 440 aa13.13□□□□□ -0.31
RAB5B-208ENST00000550283 MMP19Q99542 508 aa13.13□□□□□ -0.31
RAB5B-208ENST00000550283 JMJD4Q9H9V9 463 aa13.13□□□□□ -0.31
RAB5B-208ENST00000550283 BIN2Q9UBW5 565 aaPredicted RBP13.13□□□□□ -0.31
RAB5B-208ENST00000550283 BRPF3Q9ULD4 1205 aa13.13□□□□□ -0.31
RAB5B-208ENST00000550283 LCTP09848 1927 aa13.12□□□□□ -0.31
RAB5B-208ENST00000550283 DNAJC25-GNG10A0A024R161 153 aa13.12□□□□□ -0.31
RAB5B-208ENST00000550283 NFIBO00712 420 aa13.12□□□□□ -0.31
RAB5B-208ENST00000550283 SLC25A27O95847 323 aa13.12□□□□□ -0.31
RAB5B-208ENST00000550283 HMGCRP04035 888 aa13.12□□□□□ -0.31
RAB5B-208ENST00000550283 XRCC5P13010 732 aaKnown RBP13.12□□□□□ -0.31
RAB5B-208ENST00000550283 ALAS1P13196 640 aa13.12□□□□□ -0.31
RAB5B-208ENST00000550283 GRM4Q14833 912 aa13.12□□□□□ -0.31
RAB5B-208ENST00000550283 CMTR1Q8N1G2 835 aaKnown RBP13.12□□□□□ -0.31
RAB5B-208ENST00000550283 CLEC4DQ8WXI8 215 aa13.12□□□□□ -0.31
RAB5B-208ENST00000550283 TBC1D5Q92609 795 aa13.12□□□□□ -0.31
RAB5B-208ENST00000550283 MAML3Q96JK9 1138 aa13.12□□□□□ -0.31
RAB5B-208ENST00000550283 NEK1Q96PY6 1258 aa13.12□□□□□ -0.31
RAB5B-208ENST00000550283 CWC22Q9HCG8 908 aaKnown RBP13.12□□□□□ -0.31
RAB5B-208ENST00000550283 VAT1LQ9HCJ6 419 aa13.12□□□□□ -0.31
RAB5B-208ENST00000550283 RNF146Q9NTX7 359 aa13.12□□□□□ -0.31
RAB5B-208ENST00000550283 PLEKHA8P1O95397 391 aa13.11□□□□□ -0.31
RAB5B-208ENST00000550283 ICAM1P05362 532 aa13.11□□□□□ -0.31
RAB5B-208ENST00000550283 FCER1AP12319 257 aa13.11□□□□□ -0.31
RAB5B-208ENST00000550283 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
RAB5B-208ENST00000550283 ZKSCAN1P17029 563 aaPredicted RBP13.11□□□□□ -0.31
RAB5B-208ENST00000550283 MCM5P33992 734 aa13.11□□□□□ -0.31
RAB5B-208ENST00000550283 NT5C2P49902 561 aa13.11□□□□□ -0.31
RAB5B-208ENST00000550283 CCDC178Q5BJE1 867 aa13.11□□□□□ -0.31
RAB5B-208ENST00000550283 CCDC144CPQ8IYA2 1237 aa13.11□□□□□ -0.31
RAB5B-208ENST00000550283 ZNF654Q8IZM8 581 aa13.11□□□□□ -0.31
RAB5B-208ENST00000550283 TRERF1Q96PN7 1200 aa13.11□□□□□ -0.31
RAB5B-208ENST00000550283 RNF208Q9H0X6 261 aa13.11□□□□□ -0.31
RAB5B-208ENST00000550283 A1CFQ9NQ94 594 aaKnown RBP13.11□□□□□ -0.31
RAB5B-208ENST00000550283 CCPG1Q9ULG6 757 aa13.11□□□□□ -0.31
RAB5B-208ENST00000550283 IVNS1ABPQ9Y6Y0 642 aa13.11□□□□□ -0.31
RAB5B-208ENST00000550283 RBBP6Q7Z6E9 1792 aaKnown RBP13.11□□□□□ -0.31
RAB5B-208ENST00000550283 ZNFX1Q9P2E3 1918 aaKnown RBP13.11□□□□□ -0.31
RAB5B-208ENST00000550283 KIAA0100Q14667 2235 aaKnown RBP13.11□□□□□ -0.31
RAB5B-208ENST00000550283 SOWAHBA6NEL2 793 aa13.1□□□□□ -0.31
RAB5B-208ENST00000550283 KLRF2D3W0D1 207 aa13.1□□□□□ -0.31
RAB5B-208ENST00000550283 OPLAHO14841 1288 aa13.1□□□□□ -0.31
RAB5B-208ENST00000550283 STRNO43815 780 aa13.1□□□□□ -0.31
RAB5B-208ENST00000550283 PARP1P09874 1014 aaKnown RBP13.1□□□□□ -0.31
RAB5B-208ENST00000550283 PTGS1P23219 599 aa13.1□□□□□ -0.31
RAB5B-208ENST00000550283 OAZ1P54368 228 aa13.1□□□□□ -0.31
RAB5B-208ENST00000550283 CDC37Q16543 378 aaPredicted RBP13.1□□□□□ -0.31
RAB5B-208ENST00000550283 QRICH1Q2TAL8 776 aa13.1□□□□□ -0.31
RAB5B-208ENST00000550283 C8orf34Q49A92 452 aa13.1□□□□□ -0.31
RAB5B-208ENST00000550283 ASPRV1Q53RT3 343 aa13.1□□□□□ -0.31
RAB5B-208ENST00000550283 GPATCH4Q5T3I0 446 aaKnown RBP13.1□□□□□ -0.31
RAB5B-208ENST00000550283 SLC30A10Q6XR72 485 aa13.1□□□□□ -0.31
RAB5B-208ENST00000550283 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.1□□□□□ -0.31
RAB5B-208ENST00000550283 DPP9Q86TI2 863 aa13.1□□□□□ -0.31
RAB5B-208ENST00000550283 ABRAQ8N0Z2 381 aa13.1□□□□□ -0.31
RAB5B-208ENST00000550283 MTMR8Q96EF0 704 aa13.1□□□□□ -0.31
RAB5B-208ENST00000550283 JAKMIP1Q96N16 626 aaKnown RBP13.1□□□□□ -0.31
RAB5B-208ENST00000550283 DEFB118Q96PH6 123 aa13.1□□□□□ -0.31
RAB5B-208ENST00000550283 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.1□□□□□ -0.31
RAB5B-208ENST00000550283 PAK6Q9NQU5 681 aaPredicted RBP13.1□□□□□ -0.31
RAB5B-208ENST00000550283 MNX1P50219 401 aaPredicted RBP13.09□□□□□ -0.31
RAB5B-208ENST00000550283 USH1GQ495M9 461 aa13.09□□□□□ -0.31
RAB5B-208ENST00000550283 ANO1Q5XXA6 986 aa13.09□□□□□ -0.31
RAB5B-208ENST00000550283 DHX32Q7L7V1 743 aaKnown RBP13.09□□□□□ -0.31
RAB5B-208ENST00000550283 NUP133Q8WUM0 1156 aa13.09□□□□□ -0.31
RAB5B-208ENST00000550283 PIBF1Q8WXW3 757 aa13.09□□□□□ -0.31
RAB5B-208ENST00000550283 LENG1Q96BZ8 264 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms