RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 UBA5Q9GZZ9 404 aa25.95■■□□□ 1.74
VPS37C-202ENST00000535818 RNF146Q9NTX7 359 aa25.95■■□□□ 1.74
VPS37C-202ENST00000535818 DHX16O60231 1041 aaKnown RBP25.94■■□□□ 1.74
VPS37C-202ENST00000535818 PGK2P07205 417 aa25.94■■□□□ 1.74
VPS37C-202ENST00000535818 KRT32Q14532 448 aa25.94■■□□□ 1.74
VPS37C-202ENST00000535818 ANKRD35Q8N283 1001 aa25.94■■□□□ 1.74
VPS37C-202ENST00000535818 MTA3Q9BTC8 594 aa25.94■■□□□ 1.74
VPS37C-202ENST00000535818 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.94■■□□□ 1.741e-7■■■■■ 43.3
VPS37C-202ENST00000535818 ACAD9Q9H845 621 aa25.94■■□□□ 1.74
VPS37C-202ENST00000535818 HMX1Q9NP08 348 aaPredicted RBP25.94■■□□□ 1.74
VPS37C-202ENST00000535818 FLRT1Q9NZU1 646 aa25.94■■□□□ 1.74
VPS37C-202ENST00000535818 RPTORQ8N122 1335 aa25.93■■□□□ 1.74
VPS37C-202ENST00000535818 ICAM1P05362 532 aa25.93■■□□□ 1.74
VPS37C-202ENST00000535818 GJB1P08034 283 aa25.93■■□□□ 1.74
VPS37C-202ENST00000535818 EN2P19622 333 aaPredicted RBP25.93■■□□□ 1.74
VPS37C-202ENST00000535818 RGS19P49795 217 aa25.93■■□□□ 1.74
VPS37C-202ENST00000535818 CATIPQ7Z7H3 387 aa25.93■■□□□ 1.74
VPS37C-202ENST00000535818 IGDCC4Q8TDY8 1250 aa25.93■■□□□ 1.74
VPS37C-202ENST00000535818 TMEM87BQ96K49 555 aa25.93■■□□□ 1.74
VPS37C-202ENST00000535818 NEK1Q96PY6 1258 aa25.93■■□□□ 1.74
VPS37C-202ENST00000535818 CPVLQ9H3G5 476 aa25.93■■□□□ 1.74
VPS37C-202ENST00000535818 SENP2Q9HC62 589 aa25.93■■□□□ 1.74
VPS37C-202ENST00000535818 CACNB2Q08289 660 aaPredicted RBP25.92■■□□□ 1.74
VPS37C-202ENST00000535818 NFXL1Q6ZNB6 911 aa25.92■■□□□ 1.74
VPS37C-202ENST00000535818 RASEFQ8IZ41 740 aa25.92■■□□□ 1.74
VPS37C-202ENST00000535818 TRERF1Q96PN7 1200 aa25.92■■□□□ 1.74
VPS37C-202ENST00000535818 ZNFX1Q9P2E3 1918 aaKnown RBP25.92■■□□□ 1.74
VPS37C-202ENST00000535818 TSGA10IPQ3SY00 556 aa25.91■■□□□ 1.74
VPS37C-202ENST00000535818 OLFML2BQ68BL8 750 aa25.91■■□□□ 1.74
VPS37C-202ENST00000535818 MAML3Q96JK9 1138 aa25.91■■□□□ 1.74
VPS37C-202ENST00000535818 LY9Q9HBG7 655 aa25.91■■□□□ 1.74
VPS37C-202ENST00000535818 PNMA2Q9UL42 364 aa25.91■■□□□ 1.74
VPS37C-202ENST00000535818 CCDC69A6NI79 296 aa25.9■■□□□ 1.74
VPS37C-202ENST00000535818 SH2B2O14492 632 aaPredicted RBP25.9■■□□□ 1.74
VPS37C-202ENST00000535818 CYP2C19P33261 490 aa25.9■■□□□ 1.74
VPS37C-202ENST00000535818 HSPA4P34932 840 aa25.9■■□□□ 1.74
VPS37C-202ENST00000535818 MAP3K21Q5TCX8 1036 aa25.9■■□□□ 1.74
VPS37C-202ENST00000535818 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.9■■□□□ 1.74
VPS37C-202ENST00000535818 TMTC2Q8N394 836 aa25.9■■□□□ 1.74
VPS37C-202ENST00000535818 STAG2Q8N3U4 1231 aa25.9■■□□□ 1.74
VPS37C-202ENST00000535818 U2AF1L4Q8WU68 220 aaKnown RBP25.9■■□□□ 1.74
VPS37C-202ENST00000535818 NUP133Q8WUM0 1156 aa25.9■■□□□ 1.74
VPS37C-202ENST00000535818 DEFB118Q96PH6 123 aa25.9■■□□□ 1.74
VPS37C-202ENST00000535818 LRRC2Q9BYS8 371 aa25.9■■□□□ 1.74
VPS37C-202ENST00000535818 PAK6Q9NQU5 681 aaPredicted RBP25.9■■□□□ 1.74
VPS37C-202ENST00000535818 GPHNQ9NQX3 736 aaPredicted RBP25.9■■□□□ 1.74
VPS37C-202ENST00000535818 DIS3Q9Y2L1 958 aaKnown RBP25.9■■□□□ 1.74
VPS37C-202ENST00000535818 CENPFP49454 3210 aa25.9■■□□□ 1.74
VPS37C-202ENST00000535818 PLXNA1Q9UIW2 1896 aa25.89■■□□□ 1.74
VPS37C-202ENST00000535818 TAL1P17542 331 aaPredicted RBP25.89■■□□□ 1.74
VPS37C-202ENST00000535818 GJA8P48165 433 aa25.89■■□□□ 1.74
VPS37C-202ENST00000535818 MLLT1Q03111 559 aaPredicted RBP25.89■■□□□ 1.74
VPS37C-202ENST00000535818 GRM4Q14833 912 aa25.89■■□□□ 1.74
VPS37C-202ENST00000535818 CDC37Q16543 378 aaPredicted RBP25.89■■□□□ 1.74
VPS37C-202ENST00000535818 ZNF792Q3KQV3 632 aa25.89■■□□□ 1.74
VPS37C-202ENST00000535818 ADGRF4Q8IZF3 695 aa25.89■■□□□ 1.74
VPS37C-202ENST00000535818 VAT1LQ9HCJ6 419 aa25.89■■□□□ 1.74
VPS37C-202ENST00000535818 MAD2L2Q9UI95 211 aa25.89■■□□□ 1.74
VPS37C-202ENST00000535818 KIAA0100Q14667 2235 aaKnown RBP25.89■■□□□ 1.74
VPS37C-202ENST00000535818 WDR19Q8NEZ3 1342 aa25.88■■□□□ 1.73
VPS37C-202ENST00000535818 KLRF2D3W0D1 207 aa25.88■■□□□ 1.73
VPS37C-202ENST00000535818 EIF5BO60841 1220 aaKnown RBP25.88■■□□□ 1.73
VPS37C-202ENST00000535818 COL9A3Q14050 684 aaPredicted RBP25.88■■□□□ 1.73
VPS37C-202ENST00000535818 ADCK5Q3MIX3 580 aa25.88■■□□□ 1.73
VPS37C-202ENST00000535818 ZNF654Q8IZM8 581 aa25.88■■□□□ 1.73
VPS37C-202ENST00000535818 PALM3A6NDB9 673 aaPredicted RBP25.87■■□□□ 1.73
VPS37C-202ENST00000535818 EPB41L2O43491 1005 aaKnown RBP25.87■■□□□ 1.73
VPS37C-202ENST00000535818 DDAH1O94760 285 aa25.87■■□□□ 1.73
VPS37C-202ENST00000535818 SGPL1O95470 568 aa25.87■■□□□ 1.73
VPS37C-202ENST00000535818 HMGB1P09429 215 aaKnown RBP25.87■■□□□ 1.73
VPS37C-202ENST00000535818 CCND3P30281 292 aaPredicted RBP25.87■■□□□ 1.73
VPS37C-202ENST00000535818 LIFRP42702 1097 aa25.87■■□□□ 1.73
VPS37C-202ENST00000535818 TROAPQ12815 778 aa25.87■■□□□ 1.73
VPS37C-202ENST00000535818 MUM1L1Q5H9M0 696 aa25.87■■□□□ 1.73
VPS37C-202ENST00000535818 DHX32Q7L7V1 743 aaKnown RBP25.87■■□□□ 1.73
VPS37C-202ENST00000535818 A1CFQ9NQ94 594 aaKnown RBP25.87■■□□□ 1.73
VPS37C-202ENST00000535818 SNX14Q9Y5W7 946 aa25.87■■□□□ 1.73
VPS37C-202ENST00000535818 PFASO15067 1338 aa25.87■■□□□ 1.73
VPS37C-202ENST00000535818 DNAJC25-GNG10A0A024R161 153 aa25.86■■□□□ 1.73
VPS37C-202ENST00000535818 POTEB2H3BUK9 544 aa25.86■■□□□ 1.73
VPS37C-202ENST00000535818 TFRCP02786 760 aaKnown RBP25.86■■□□□ 1.73
VPS37C-202ENST00000535818 CNGA1P29973 690 aa25.86■■□□□ 1.73
VPS37C-202ENST00000535818 USH1GQ495M9 461 aa25.86■■□□□ 1.73
VPS37C-202ENST00000535818 NSMFQ6X4W1 530 aa25.86■■□□□ 1.73
VPS37C-202ENST00000535818 CTCFLQ8NI51 663 aaPredicted RBP25.86■■□□□ 1.73
VPS37C-202ENST00000535818 KCNB2Q92953 911 aa25.86■■□□□ 1.73
VPS37C-202ENST00000535818 SHISA4Q96DD7 197 aa25.86■■□□□ 1.73
VPS37C-202ENST00000535818 MYL10Q9BUA6 226 aa25.86■■□□□ 1.73
VPS37C-202ENST00000535818 TCEANC2Q96MN5 208 aa25.85■■□□□ 1.73
VPS37C-202ENST00000535818 JAKMIP1Q96N16 626 aaKnown RBP25.85■■□□□ 1.73
VPS37C-202ENST00000535818 TINF2Q9BSI4 451 aa25.85■■□□□ 1.73
VPS37C-202ENST00000535818 JMJD4Q9H9V9 463 aa25.85■■□□□ 1.73
VPS37C-202ENST00000535818 CYBAP13498 195 aa25.84■■□□□ 1.73
VPS37C-202ENST00000535818 KIF5BP33176 963 aa25.84■■□□□ 1.73
VPS37C-202ENST00000535818 QRICH1Q2TAL8 776 aa25.84■■□□□ 1.73
VPS37C-202ENST00000535818 SYNE3Q6ZMZ3 975 aa25.84■■□□□ 1.73
VPS37C-202ENST00000535818 SLC12A7Q9Y666 1083 aa25.84■■□□□ 1.73
VPS37C-202ENST00000535818 NFIBO00712 420 aa25.83■■□□□ 1.73
VPS37C-202ENST00000535818 IGHA2P01877 340 aa25.83■■□□□ 1.73
VPS37C-202ENST00000535818 CALM1P0DP23 149 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms