RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 STOX1Q6ZVD7 989 aa15.64■□□□□ 0.09
CAPN1-227ENST00000533909 CHST3Q7LGC8 479 aa15.64■□□□□ 0.09
CAPN1-227ENST00000533909 CATIPQ7Z7H3 387 aa15.64■□□□□ 0.09
CAPN1-227ENST00000533909 NPLOC4Q8TAT6 608 aa15.64■□□□□ 0.09
CAPN1-227ENST00000533909 U2AF1L4Q8WU68 220 aaKnown RBP15.64■□□□□ 0.09
CAPN1-227ENST00000533909 AGBL1Q96MI9 1066 aa15.64■□□□□ 0.09
CAPN1-227ENST00000533909 ACAD9Q9H845 621 aa15.64■□□□□ 0.09
CAPN1-227ENST00000533909 RNF146Q9NTX7 359 aa15.64■□□□□ 0.09
CAPN1-227ENST00000533909 PRC1O43663 620 aa15.63■□□□□ 0.09
CAPN1-227ENST00000533909 COBLO75128 1261 aa15.63■□□□□ 0.09
CAPN1-227ENST00000533909 ICAM1P05362 532 aa15.63■□□□□ 0.09
CAPN1-227ENST00000533909 CNGA1P29973 690 aa15.63■□□□□ 0.09
CAPN1-227ENST00000533909 CYP2C19P33261 490 aa15.63■□□□□ 0.09
CAPN1-227ENST00000533909 GJA8P48165 433 aa15.63■□□□□ 0.09
CAPN1-227ENST00000533909 CACNB2Q08289 660 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-227ENST00000533909 NECTIN1Q15223 517 aa15.63■□□□□ 0.09
CAPN1-227ENST00000533909 OLFML2BQ68BL8 750 aa15.63■□□□□ 0.09
CAPN1-227ENST00000533909 NFXL1Q6ZNB6 911 aa15.63■□□□□ 0.09
CAPN1-227ENST00000533909 TRERF1Q96PN7 1200 aa15.63■□□□□ 0.09
CAPN1-227ENST00000533909 RIPK3Q9Y572 518 aa15.63■□□□□ 0.09
CAPN1-227ENST00000533909 ZNF236Q9UL36 1845 aa15.62■□□□□ 0.09
CAPN1-227ENST00000533909 SGPL1O95470 568 aa15.62■□□□□ 0.09
CAPN1-227ENST00000533909 CAPN2P17655 700 aa15.62■□□□□ 0.09
CAPN1-227ENST00000533909 KRT32Q14532 448 aa15.62■□□□□ 0.09
CAPN1-227ENST00000533909 SEC23AQ15436 765 aa15.62■□□□□ 0.09
CAPN1-227ENST00000533909 MB21D2Q8IYB1 491 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-227ENST00000533909 MAML3Q96JK9 1138 aa15.62■□□□□ 0.09
CAPN1-227ENST00000533909 UBA5Q9GZZ9 404 aa15.62■□□□□ 0.09
CAPN1-227ENST00000533909 RANBP17Q9H2T7 1088 aaKnown RBP15.62■□□□□ 0.09
CAPN1-227ENST00000533909 PAK6Q9NQU5 681 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-227ENST00000533909 FLRT1Q9NZU1 646 aa15.62■□□□□ 0.09
CAPN1-227ENST00000533909 RBBP6Q7Z6E9 1792 aaKnown RBP15.62■□□□□ 0.09
CAPN1-227ENST00000533909 CCDC69A6NI79 296 aa15.61■□□□□ 0.09
CAPN1-227ENST00000533909 MAP3K21Q5TCX8 1036 aa15.61■□□□□ 0.09
CAPN1-227ENST00000533909 VAT1LQ9HCJ6 419 aa15.61■□□□□ 0.09
CAPN1-227ENST00000533909 DIS3Q9Y2L1 958 aaKnown RBP15.61■□□□□ 0.09
CAPN1-227ENST00000533909 PFASO15067 1338 aa15.61■□□□□ 0.09
CAPN1-227ENST00000533909 ZNF536O15090 1300 aa15.61■□□□□ 0.09
CAPN1-227ENST00000533909 POTEB2H3BUK9 544 aa15.6■□□□□ 0.09
CAPN1-227ENST00000533909 CCND3P30281 292 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-227ENST00000533909 FGD1P98174 961 aa15.6■□□□□ 0.09
CAPN1-227ENST00000533909 NSMFQ6X4W1 530 aa15.6■□□□□ 0.09
CAPN1-227ENST00000533909 TMTC2Q8N394 836 aa15.6■□□□□ 0.09
CAPN1-227ENST00000533909 NUP133Q8WUM0 1156 aa15.6■□□□□ 0.09
CAPN1-227ENST00000533909 TMEM87BQ96K49 555 aa15.6■□□□□ 0.09
CAPN1-227ENST00000533909 MTA3Q9BTC8 594 aa15.6■□□□□ 0.09
CAPN1-227ENST00000533909 CNPY2Q9Y2B0 182 aa15.6■□□□□ 0.09
CAPN1-227ENST00000533909 PDE4DIPQ5VU43 2346 aa15.59■□□□□ 0.09
CAPN1-227ENST00000533909 KLRF2D3W0D1 207 aa15.59■□□□□ 0.09
CAPN1-227ENST00000533909 MSCO60682 206 aa15.59■□□□□ 0.09
CAPN1-227ENST00000533909 FARP2O94887 1054 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-227ENST00000533909 ANTXR2P58335 489 aa15.59■□□□□ 0.09
CAPN1-227ENST00000533909 CDC37Q16543 378 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-227ENST00000533909 ZNF792Q3KQV3 632 aa15.59■□□□□ 0.09
CAPN1-227ENST00000533909 USH1GQ495M9 461 aa15.59■□□□□ 0.09
CAPN1-227ENST00000533909 ADGRF4Q8IZF3 695 aa15.59■□□□□ 0.09
CAPN1-227ENST00000533909 CTCFLQ8NI51 663 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-227ENST00000533909 NEK1Q96PY6 1258 aa15.59■□□□□ 0.09
CAPN1-227ENST00000533909 TINF2Q9BSI4 451 aa15.59■□□□□ 0.09
CAPN1-227ENST00000533909 CPVLQ9H3G5 476 aa15.59■□□□□ 0.09
CAPN1-227ENST00000533909 PTPDC1A2A3K4 754 aa15.58■□□□□ 0.08
CAPN1-227ENST00000533909 HMGB1P09429 215 aaKnown RBP15.58■□□□□ 0.08
CAPN1-227ENST00000533909 KIF5BP33176 963 aa15.58■□□□□ 0.08
CAPN1-227ENST00000533909 GRM4Q14833 912 aa15.58■□□□□ 0.08
CAPN1-227ENST00000533909 SYNE3Q6ZMZ3 975 aa15.58■□□□□ 0.08
CAPN1-227ENST00000533909 MSL3Q8N5Y2 521 aaKnown RBP15.58■□□□□ 0.08
CAPN1-227ENST00000533909 IGDCC4Q8TDY8 1250 aa15.58■□□□□ 0.08
CAPN1-227ENST00000533909 SHISA4Q96DD7 197 aa15.58■□□□□ 0.08
CAPN1-227ENST00000533909 LY9Q9HBG7 655 aa15.58■□□□□ 0.08
CAPN1-227ENST00000533909 A1CFQ9NQ94 594 aaKnown RBP15.58■□□□□ 0.08
CAPN1-227ENST00000533909 WDR19Q8NEZ3 1342 aa15.58■□□□□ 0.08
CAPN1-227ENST00000533909 SH2B2O14492 632 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-227ENST00000533909 DDAH1O94760 285 aa15.57■□□□□ 0.08
CAPN1-227ENST00000533909 CYBAP13498 195 aa15.57■□□□□ 0.08
CAPN1-227ENST00000533909 MUM1L1Q5H9M0 696 aa15.57■□□□□ 0.08
CAPN1-227ENST00000533909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.57■□□□□ 0.08
CAPN1-227ENST00000533909 FBXO11Q86XK2 927 aa15.57■□□□□ 0.08
CAPN1-227ENST00000533909 ZNF654Q8IZM8 581 aa15.57■□□□□ 0.08
CAPN1-227ENST00000533909 STAG2Q8N3U4 1231 aa15.57■□□□□ 0.08
CAPN1-227ENST00000533909 SENP2Q9HC62 589 aa15.57■□□□□ 0.08
CAPN1-227ENST00000533909 DDX20Q9UHI6 824 aaKnown RBP15.57■□□□□ 0.08
CAPN1-227ENST00000533909 NRBP1Q9UHY1 535 aa15.57■□□□□ 0.08
CAPN1-227ENST00000533909 MAD2L2Q9UI95 211 aa15.57■□□□□ 0.08
CAPN1-227ENST00000533909 SLC12A7Q9Y666 1083 aa15.57■□□□□ 0.08
CAPN1-227ENST00000533909 ZNFX1Q9P2E3 1918 aaKnown RBP15.56■□□□□ 0.08
CAPN1-227ENST00000533909 DNAJC25-GNG10A0A024R161 153 aa15.56■□□□□ 0.08
CAPN1-227ENST00000533909 PALM3A6NDB9 673 aaPredicted RBP15.56■□□□□ 0.08
CAPN1-227ENST00000533909 MYCNP04198 464 aaPredicted RBP15.56■□□□□ 0.08
CAPN1-227ENST00000533909 CALM1P0DP23 149 aa15.56■□□□□ 0.08
CAPN1-227ENST00000533909 CALM2P0DP24 149 aa15.56■□□□□ 0.08
CAPN1-227ENST00000533909 CALM3P0DP25 149 aa15.56■□□□□ 0.08
CAPN1-227ENST00000533909 TAL1P17542 331 aaPredicted RBP15.56■□□□□ 0.08
CAPN1-227ENST00000533909 TRAF1Q13077 416 aa15.56■□□□□ 0.08
CAPN1-227ENST00000533909 QRICH1Q2TAL8 776 aa15.56■□□□□ 0.08
CAPN1-227ENST00000533909 PRAMEF19Q5SWL8 479 aa15.56■□□□□ 0.08
CAPN1-227ENST00000533909 ZNF467Q7Z7K2 595 aaPredicted RBP15.56■□□□□ 0.08
CAPN1-227ENST00000533909 HOMER1Q86YM7 354 aa15.56■□□□□ 0.08
CAPN1-227ENST00000533909 RASEFQ8IZ41 740 aa15.56■□□□□ 0.08
CAPN1-227ENST00000533909 ANKLE1Q8NAG6 615 aa15.56■□□□□ 0.08
CAPN1-227ENST00000533909 MPHOSPH6Q99547 160 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms