RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 ZNF157P51786 506 aaPredicted RBP10.72□□□□□ -0.69
COMMD9-205ENST00000528608 CCDC27Q2M243 656 aa10.72□□□□□ -0.69
COMMD9-205ENST00000528608 DTHD1Q6ZMT9 781 aa10.72□□□□□ -0.69
COMMD9-205ENST00000528608 TMC7Q7Z402 723 aa10.72□□□□□ -0.69
COMMD9-205ENST00000528608 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.71□□□□□ -0.69
COMMD9-205ENST00000528608 AOC2O75106 756 aa10.71□□□□□ -0.69
COMMD9-205ENST00000528608 WNT11O96014 354 aa10.71□□□□□ -0.69
COMMD9-205ENST00000528608 NFICP08651 508 aa10.71□□□□□ -0.69
COMMD9-205ENST00000528608 RFC4P35249 363 aa10.71□□□□□ -0.69
COMMD9-205ENST00000528608 COL15A1P39059 1388 aa10.71□□□□□ -0.69
COMMD9-205ENST00000528608 ZAR1Q86SH2 424 aa10.71□□□□□ -0.69
COMMD9-205ENST00000528608 GLIS3Q8NEA6 775 aa10.71□□□□□ -0.69
COMMD9-205ENST00000528608 USP42Q9H9J4 1324 aaKnown RBP10.71□□□□□ -0.69
COMMD9-205ENST00000528608 FAM105AQ9NUU6 356 aa10.71□□□□□ -0.69
COMMD9-205ENST00000528608 ADAMTS4O75173 837 aa10.7□□□□□ -0.7
COMMD9-205ENST00000528608 FOSL1P15407 271 aa10.7□□□□□ -0.7
COMMD9-205ENST00000528608 MAPK1P28482 360 aa10.7□□□□□ -0.7
COMMD9-205ENST00000528608 ADMP35318 185 aa10.7□□□□□ -0.7
COMMD9-205ENST00000528608 IL6STP40189 918 aaPredicted RBP10.7□□□□□ -0.7
COMMD9-205ENST00000528608 ASPAP45381 313 aa10.7□□□□□ -0.7
COMMD9-205ENST00000528608 FCGRTP55899 365 aa10.7□□□□□ -0.7
COMMD9-205ENST00000528608 SHISA5Q8N114 240 aa10.7□□□□□ -0.7
COMMD9-205ENST00000528608 WDR18Q9BV38 432 aa10.7□□□□□ -0.7
COMMD9-205ENST00000528608 IFT57Q9NWB7 429 aa10.7□□□□□ -0.7
COMMD9-205ENST00000528608 PPP4R2Q9NY27 417 aa10.7□□□□□ -0.7
COMMD9-205ENST00000528608 PPP1R1BQ9UD71 204 aaPredicted RBP10.7□□□□□ -0.7
COMMD9-205ENST00000528608 GPN3Q9UHW5 284 aaPredicted RBP10.7□□□□□ -0.7
COMMD9-205ENST00000528608 LAMB4A4D0S4 1761 aa10.7□□□□□ -0.7
COMMD9-205ENST00000528608 EIF2S2P20042 333 aaKnown RBP10.69□□□□□ -0.7
COMMD9-205ENST00000528608 POLD1P28340 1107 aa10.69□□□□□ -0.7
COMMD9-205ENST00000528608 GNAI1P63096 354 aa10.69□□□□□ -0.7
COMMD9-205ENST00000528608 FAAP100Q0VG06 881 aa10.69□□□□□ -0.7
COMMD9-205ENST00000528608 PI16Q6UXB8 463 aa10.69□□□□□ -0.7
COMMD9-205ENST00000528608 TSR2Q969E8 191 aaKnown RBP10.69□□□□□ -0.7
COMMD9-205ENST00000528608 SEMA6CQ9H3T2 930 aa10.69□□□□□ -0.7
COMMD9-205ENST00000528608 NARFQ9UHQ1 456 aa10.69□□□□□ -0.7
COMMD9-205ENST00000528608 ANXA1P04083 346 aa10.68□□□□□ -0.7
COMMD9-205ENST00000528608 MMP10P09238 476 aa10.68□□□□□ -0.7
COMMD9-205ENST00000528608 HNRNPUQ00839 825 aaKnown RBP eCLIP10.68□□□□□ -0.7
COMMD9-205ENST00000528608 PROSER3Q2NL68 480 aa10.68□□□□□ -0.7
COMMD9-205ENST00000528608 C8orf58Q8NAV2 365 aa10.68□□□□□ -0.7
COMMD9-205ENST00000528608 ZC3H12CQ9C0D7 883 aaKnown RBP10.68□□□□□ -0.7
COMMD9-205ENST00000528608 ACSS3Q9H6R3 686 aa10.68□□□□□ -0.7
COMMD9-205ENST00000528608 ANGEL1Q9UNK9 670 aaKnown RBP10.68□□□□□ -0.7
COMMD9-205ENST00000528608 ZNF521Q96K83 1311 aa10.67□□□□□ -0.7
COMMD9-205ENST00000528608 FAM170BA6NMN3 283 aa10.67□□□□□ -0.7
COMMD9-205ENST00000528608 ELL2O00472 640 aaPredicted RBP10.67□□□□□ -0.7
COMMD9-205ENST00000528608 CYP26A1O43174 497 aa10.67□□□□□ -0.7
COMMD9-205ENST00000528608 CAMTA2O94983 1202 aa10.67□□□□□ -0.7
COMMD9-205ENST00000528608 LIG1P18858 919 aa10.67□□□□□ -0.7
COMMD9-205ENST00000528608 TM4SF1P30408 202 aa10.67□□□□□ -0.7
COMMD9-205ENST00000528608 CALD1Q05682 793 aaKnown RBP10.67□□□□□ -0.7
COMMD9-205ENST00000528608 DDR1Q08345 913 aa10.67□□□□□ -0.7
COMMD9-205ENST00000528608 DUSP27Q5VZP5 1158 aa10.67□□□□□ -0.7
COMMD9-205ENST00000528608 LRP10Q7Z4F1 713 aa10.67□□□□□ -0.7
COMMD9-205ENST00000528608 NLGN1Q8N2Q7 840 aa10.67□□□□□ -0.7
COMMD9-205ENST00000528608 NGEFQ8N5V2 710 aa10.67□□□□□ -0.7
COMMD9-205ENST00000528608 TSPYL6Q8N831 410 aa10.67□□□□□ -0.7
COMMD9-205ENST00000528608 SYT17Q9BSW7 474 aa10.67□□□□□ -0.7
COMMD9-205ENST00000528608 BCO2Q9BYV7 579 aa10.67□□□□□ -0.7
COMMD9-205ENST00000528608 DAGLAQ9Y4D2 1042 aa10.67□□□□□ -0.7
COMMD9-205ENST00000528608 A0A087WZG4 1122 aa10.66□□□□□ -0.7
COMMD9-205ENST00000528608 PNMA6FA0A0J9YX94 578 aa10.66□□□□□ -0.7
COMMD9-205ENST00000528608 MYL6BP14649 208 aa10.66□□□□□ -0.7
COMMD9-205ENST00000528608 PPP2R3AQ06190 1150 aa10.66□□□□□ -0.7
COMMD9-205ENST00000528608 NFIXQ14938 502 aa10.66□□□□□ -0.7
COMMD9-205ENST00000528608 MSMPQ1L6U9 139 aa10.66□□□□□ -0.7
COMMD9-205ENST00000528608 TTLL7Q6ZT98 887 aa10.66□□□□□ -0.7
COMMD9-205ENST00000528608 WDR63Q8IWG1 891 aa10.66□□□□□ -0.7
COMMD9-205ENST00000528608 NLGN2Q8NFZ4 835 aa10.66□□□□□ -0.7
COMMD9-205ENST00000528608 GSX1Q9H4S2 264 aaPredicted RBP10.66□□□□□ -0.7
COMMD9-205ENST00000528608 CCDC86Q9H6F5 360 aaKnown RBP10.66□□□□□ -0.7
COMMD9-205ENST00000528608 IL16Q14005 1332 aa10.65□□□□□ -0.7
COMMD9-205ENST00000528608 SYNGAP1Q96PV0 1343 aa10.65□□□□□ -0.7
COMMD9-205ENST00000528608 POLRMTO00411 1230 aaKnown RBP10.65□□□□□ -0.7
COMMD9-205ENST00000528608 PLCB3Q01970 1234 aa10.65□□□□□ -0.7
COMMD9-205ENST00000528608 CYP27A1Q02318 531 aa10.65□□□□□ -0.7
COMMD9-205ENST00000528608 TBC1D9BQ66K14 1250 aa10.65□□□□□ -0.7
COMMD9-205ENST00000528608 GATA6Q92908 595 aa10.65□□□□□ -0.7
COMMD9-205ENST00000528608 PPP1R9AQ9ULJ8 1098 aa10.65□□□□□ -0.7
COMMD9-205ENST00000528608 FANCIQ9NVI1 1328 aa10.64□□□□□ -0.71
COMMD9-205ENST00000528608 SCN7AQ01118 1682 aa10.64□□□□□ -0.71
COMMD9-205ENST00000528608 GSTP1P09211 210 aaKnown RBP10.64□□□□□ -0.71
COMMD9-205ENST00000528608 XRCC5P13010 732 aaKnown RBP10.64□□□□□ -0.71
COMMD9-205ENST00000528608 HLFQ16534 295 aa10.64□□□□□ -0.71
COMMD9-205ENST00000528608 KRTAP9-2Q9BYQ4 174 aa10.64□□□□□ -0.71
COMMD9-205ENST00000528608 PIDD1Q9HB75 910 aa10.64□□□□□ -0.71
COMMD9-205ENST00000528608 TMEM39AQ9NV64 488 aa10.64□□□□□ -0.71
COMMD9-205ENST00000528608 CHPF2Q9P2E5 772 aa10.64□□□□□ -0.71
COMMD9-205ENST00000528608 BCORQ6W2J9 1755 aa10.64□□□□□ -0.71
COMMD9-205ENST00000528608 TMPRSS2O15393 492 aa10.63□□□□□ -0.71
COMMD9-205ENST00000528608 TREHO43280 583 aa10.63□□□□□ -0.71
COMMD9-205ENST00000528608 HOXB7P09629 217 aa10.63□□□□□ -0.71
COMMD9-205ENST00000528608 SLFN14P0C7P3 912 aa10.63□□□□□ -0.71
COMMD9-205ENST00000528608 DSC3Q14574 896 aa10.63□□□□□ -0.71
COMMD9-205ENST00000528608 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.63□□□□□ -0.71
COMMD9-205ENST00000528608 WDR89Q96FK6 387 aaPredicted RBP10.63□□□□□ -0.71
COMMD9-205ENST00000528608 KRT82Q9NSB4 513 aa10.63□□□□□ -0.71
COMMD9-205ENST00000528608 AKAP2Q9Y2D5 859 aa10.63□□□□□ -0.71
COMMD9-205ENST00000528608 AFDNP55196 1824 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms