RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 AEBP2Q6ZN18 517 aaPredicted RBP37.05■■■■□ 3.52
COMMD9-205ENST00000528608 CHIC1Q5VXU3 224 aa35.64■■■■□ 3.3
COMMD9-205ENST00000528608 SENP3Q9H4L4 574 aaPredicted RBP31.6■■■□□ 2.65
COMMD9-205ENST00000528608 PHF23Q9BUL5 403 aaPredicted RBP31.24■■■□□ 2.59
COMMD9-205ENST00000528608 FOXD1Q16676 465 aa29.36■■■□□ 2.29
COMMD9-205ENST00000528608 PLPPR3Q6T4P5 718 aa28.7■■■□□ 2.18
COMMD9-205ENST00000528608 PPP6R1Q9UPN7 881 aa27.76■■■□□ 2.03
COMMD9-205ENST00000528608 ADRA2BP18089 450 aa27.74■■■□□ 2.03
COMMD9-205ENST00000528608 PIAS4Q8N2W9 510 aaPredicted RBP27.6■■■□□ 2.01
COMMD9-205ENST00000528608 MSH5O43196 834 aa27.36■■□□□ 1.97
COMMD9-205ENST00000528608 POTEDQ86YR6 584 aa25.93■■□□□ 1.74
COMMD9-205ENST00000528608 SCAF1Q9H7N4 1312 aaKnown RBP25.42■■□□□ 1.66
COMMD9-205ENST00000528608 MAPK8IP2Q13387 824 aaPredicted RBP25.33■■□□□ 1.65
COMMD9-205ENST00000528608 PPP4R3CPQ6ZMV5 832 aa25.21■■□□□ 1.63
COMMD9-205ENST00000528608 DMRT2Q9Y5R5 561 aa25.1■■□□□ 1.61
COMMD9-205ENST00000528608 CNKSR2Q8WXI2 1034 aa24.64■■□□□ 1.54
COMMD9-205ENST00000528608 NCBP3Q53F19 620 aaKnown RBP24.42■■□□□ 1.5
COMMD9-205ENST00000528608 HOXD11P31277 338 aaPredicted RBP24.33■■□□□ 1.49
COMMD9-205ENST00000528608 RNF216Q9NWF9 866 aaPredicted RBP24.3■■□□□ 1.48
COMMD9-205ENST00000528608 DCAF8L1A6NGE4 600 aa24.15■■□□□ 1.46
COMMD9-205ENST00000528608 NPM3O75607 178 aaKnown RBP24■■□□□ 1.43
COMMD9-205ENST00000528608 KCNA4P22459 653 aa23.94■■□□□ 1.42
COMMD9-205ENST00000528608 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.33
COMMD9-205ENST00000528608 RNF39Q9H2S5 420 aa23.35■■□□□ 1.33
COMMD9-205ENST00000528608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.26■■□□□ 1.31
COMMD9-205ENST00000528608 CACNB1Q02641 598 aaPredicted RBP23.24■■□□□ 1.31
COMMD9-205ENST00000528608 C1QBPQ07021 282 aaKnown RBP23.05■■□□□ 1.28
COMMD9-205ENST00000528608 SLC4A2P04920 1241 aa22.78■■□□□ 1.24
COMMD9-205ENST00000528608 U3KPZ7 1027 aaPredicted RBP22.77■■□□□ 1.24
COMMD9-205ENST00000528608 SLC4A1APQ9BWU0 796 aaKnown RBP22.72■■□□□ 1.23
COMMD9-205ENST00000528608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.33■■□□□ 1.17
COMMD9-205ENST00000528608 HNRNPUL2Q1KMD3 747 aaKnown RBP22.33■■□□□ 1.17
COMMD9-205ENST00000528608 SPINK5Q9NQ38 1064 aaPredicted RBP22.32■■□□□ 1.16
COMMD9-205ENST00000528608 CAPN15O75808 1086 aa22.31■■□□□ 1.16
COMMD9-205ENST00000528608 APLP2Q06481 763 aa22.26■■□□□ 1.15
COMMD9-205ENST00000528608 MYCNP04198 464 aaPredicted RBP22.24■■□□□ 1.15
COMMD9-205ENST00000528608 FOXD4L1Q9NU39 408 aa22.23■■□□□ 1.15
COMMD9-205ENST00000528608 SAMD1Q6SPF0 538 aaPredicted RBP22.21■■□□□ 1.15
COMMD9-205ENST00000528608 TRHP20396 242 aaPredicted RBP22.06■■□□□ 1.12
COMMD9-205ENST00000528608 ZNF219Q9P2Y4 722 aaPredicted RBP22.03■■□□□ 1.12
COMMD9-205ENST00000528608 DSG3P32926 999 aa22.01■■□□□ 1.11
COMMD9-205ENST00000528608 ZBTB22O15209 634 aa21.98■■□□□ 1.11
COMMD9-205ENST00000528608 ABCB7O75027 752 aa21.82■■□□□ 1.08
COMMD9-205ENST00000528608 ATF5Q9Y2D1 282 aaPredicted RBP21.62■■□□□ 1.05
COMMD9-205ENST00000528608 POLA2Q14181 598 aa21.52■■□□□ 1.04
COMMD9-205ENST00000528608 ATXN8OSP0DMR3 200 aa21.48■■□□□ 1.03
COMMD9-205ENST00000528608 EHMT2Q96KQ7 1210 aa21.42■■□□□ 1.02
COMMD9-205ENST00000528608 CSRNP3Q8WYN3 585 aa21.37■■□□□ 1.01
COMMD9-205ENST00000528608 ZBTB12Q9Y330 459 aaPredicted RBP21.16■□□□□ 0.98
COMMD9-205ENST00000528608 RBM42Q9BTD8 480 aaKnown RBP21.06■□□□□ 0.96
COMMD9-205ENST00000528608 FBLN2P98095 1184 aa20.85■□□□□ 0.93
COMMD9-205ENST00000528608 OSCARQ8IYS5 282 aa20.85■□□□□ 0.93
COMMD9-205ENST00000528608 MKRN4PQ13434 485 aaPredicted RBP20.65■□□□□ 0.9
COMMD9-205ENST00000528608 AKT1S1Q96B36 256 aa20.63■□□□□ 0.89
COMMD9-205ENST00000528608 SPDYE2BA6NHP3 402 aa20.52■□□□□ 0.88
COMMD9-205ENST00000528608 SPDYE6P0CI01 402 aa20.52■□□□□ 0.88
COMMD9-205ENST00000528608 SPDYE2Q495Y8 402 aa20.52■□□□□ 0.88
COMMD9-205ENST00000528608 POTEHQ6S545 545 aa20.43■□□□□ 0.86
COMMD9-205ENST00000528608 REM2Q8IYK8 340 aaPredicted RBP20.43■□□□□ 0.86
COMMD9-205ENST00000528608 CHRDL2Q6WN34 429 aa20.39■□□□□ 0.85
COMMD9-205ENST00000528608 ZNF692Q9BU19 519 aaPredicted RBP20.36■□□□□ 0.85
COMMD9-205ENST00000528608 SSUH2Q9Y2M2 353 aa20.26■□□□□ 0.83
COMMD9-205ENST00000528608 PITPNM1O00562 1244 aa20.21■□□□□ 0.83
COMMD9-205ENST00000528608 PABPN1Q86U42 306 aaKnown RBP eCLIP20.07■□□□□ 0.8
COMMD9-205ENST00000528608 SPDYE1Q8NFV5 336 aaPredicted RBP20.07■□□□□ 0.8
COMMD9-205ENST00000528608 CLEC11AQ9Y240 323 aa20.04■□□□□ 0.8
COMMD9-205ENST00000528608 PIP4P2Q8N4L2 257 aa19.99■□□□□ 0.79
COMMD9-205ENST00000528608 SPDYE4A6NLX3 237 aa19.96■□□□□ 0.79
COMMD9-205ENST00000528608 FXR2P51116 673 aaKnown RBP eCLIP19.92■□□□□ 0.78
COMMD9-205ENST00000528608 NISCHQ9Y2I1 1504 aa19.89■□□□□ 0.77
COMMD9-205ENST00000528608 PRR29P0C7W0 189 aa19.76■□□□□ 0.75
COMMD9-205ENST00000528608 PRKAR2AP13861 404 aaKnown RBP19.71■□□□□ 0.75
COMMD9-205ENST00000528608 STAG3Q9UJ98 1225 aa19.63■□□□□ 0.73
COMMD9-205ENST00000528608 CHADLQ6NUI6 762 aa19.58■□□□□ 0.72
COMMD9-205ENST00000528608 HAX1O00165 279 aa19.55■□□□□ 0.72
COMMD9-205ENST00000528608 PROM2Q8N271 834 aa19.47■□□□□ 0.71
COMMD9-205ENST00000528608 FKBP8Q14318 412 aa19.42■□□□□ 0.7
COMMD9-205ENST00000528608 SP7Q8TDD2 431 aaPredicted RBP19.36■□□□□ 0.69
COMMD9-205ENST00000528608 CREBZFQ9NS37 354 aa19.32■□□□□ 0.68
COMMD9-205ENST00000528608 FARP1Q9Y4F1 1045 aaPredicted RBP19.32■□□□□ 0.68
COMMD9-205ENST00000528608 C19orf67A6NJJ6 358 aa19.27■□□□□ 0.68
COMMD9-205ENST00000528608 EVX2Q03828 476 aa19.25■□□□□ 0.67
COMMD9-205ENST00000528608 CD44P16070 742 aaKnown RBP19.12■□□□□ 0.65
COMMD9-205ENST00000528608 NPM1P06748 294 aaKnown RBP eCLIP19.04■□□□□ 0.64
COMMD9-205ENST00000528608 PLEKHG5O94827 1062 aa19.01■□□□□ 0.63
COMMD9-205ENST00000528608 MNX1P50219 401 aaPredicted RBP19.01■□□□□ 0.63
COMMD9-205ENST00000528608 MIER1Q8N108 512 aa19■□□□□ 0.63
COMMD9-205ENST00000528608 PLCD3Q8N3E9 789 aa18.94■□□□□ 0.62
COMMD9-205ENST00000528608 ZRANB1Q9UGI0 708 aa18.92■□□□□ 0.62
COMMD9-205ENST00000528608 PAK3O75914 559 aaPredicted RBP18.91■□□□□ 0.62
COMMD9-205ENST00000528608 FBXO3Q9UK99 471 aa18.9■□□□□ 0.62
COMMD9-205ENST00000528608 GABBR2O75899 941 aa18.89■□□□□ 0.61
COMMD9-205ENST00000528608 ZNF579Q8NAF0 562 aaKnown RBP18.83■□□□□ 0.6
COMMD9-205ENST00000528608 CLCN6P51797 869 aa18.76■□□□□ 0.59
COMMD9-205ENST00000528608 ZBTB47Q9UFB7 747 aaPredicted RBP18.76■□□□□ 0.59
COMMD9-205ENST00000528608 TSPYL2Q9H2G4 693 aaPredicted RBP18.7■□□□□ 0.58
COMMD9-205ENST00000528608 PHF12Q96QT6 1004 aa18.69■□□□□ 0.58
COMMD9-205ENST00000528608 VASPP50552 380 aaPredicted RBP18.65■□□□□ 0.58
COMMD9-205ENST00000528608 RASEFQ8IZ41 740 aa18.62■□□□□ 0.57
COMMD9-205ENST00000528608 GALR2O43603 387 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms