RNA–Protein interactions for RNA: ENST00000527205.1

TTC39A-215, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 4

Gene TTC39A, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-215ENST00000527205 TMEM67Q5HYA8 995 aa22.75■■□□□ 1.23
TTC39A-215ENST00000527205 ABRAQ8N0Z2 381 aa22.75■■□□□ 1.23
TTC39A-215ENST00000527205 SHISA4Q96DD7 197 aa22.75■■□□□ 1.23
TTC39A-215ENST00000527205 LY9Q9HBG7 655 aa22.75■■□□□ 1.23
TTC39A-215ENST00000527205 HOMER2Q9NSB8 354 aa22.75■■□□□ 1.23
TTC39A-215ENST00000527205 SH2B2O14492 632 aaPredicted RBP22.74■■□□□ 1.23
TTC39A-215ENST00000527205 IGHA2P01877 340 aa22.74■■□□□ 1.23
TTC39A-215ENST00000527205 COPB2P35606 906 aa22.74■■□□□ 1.23
TTC39A-215ENST00000527205 RGS19P49795 217 aa22.74■■□□□ 1.23
TTC39A-215ENST00000527205 GPATCH4Q5T3I0 446 aaKnown RBP22.74■■□□□ 1.23
TTC39A-215ENST00000527205 MAP3K21Q5TCX8 1036 aa22.74■■□□□ 1.23
TTC39A-215ENST00000527205 DPP9Q86TI2 863 aa22.74■■□□□ 1.23
TTC39A-215ENST00000527205 KCNB2Q92953 911 aa22.74■■□□□ 1.23
TTC39A-215ENST00000527205 RNF208Q9H0X6 261 aa22.74■■□□□ 1.23
TTC39A-215ENST00000527205 PRKAR2AP13861 404 aaKnown RBP22.73■■□□□ 1.23
TTC39A-215ENST00000527205 HSPA4P34932 840 aa22.73■■□□□ 1.23
TTC39A-215ENST00000527205 CACNB2Q08289 660 aaPredicted RBP22.73■■□□□ 1.23
TTC39A-215ENST00000527205 SLC35G1Q2M3R5 365 aa22.73■■□□□ 1.23
TTC39A-215ENST00000527205 ASPRV1Q53RT3 343 aa22.73■■□□□ 1.23
TTC39A-215ENST00000527205 MUM1L1Q5H9M0 696 aa22.73■■□□□ 1.23
TTC39A-215ENST00000527205 RNF20Q5VTR2 975 aa22.73■■□□□ 1.23
TTC39A-215ENST00000527205 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.73■■□□□ 1.23
TTC39A-215ENST00000527205 TCEANC2Q96MN5 208 aa22.73■■□□□ 1.23
TTC39A-215ENST00000527205 TMEM106CQ9BVX2 250 aa22.73■■□□□ 1.23
TTC39A-215ENST00000527205 RNF146Q9NTX7 359 aa22.73■■□□□ 1.23
TTC39A-215ENST00000527205 MAD2L2Q9UI95 211 aa22.73■■□□□ 1.23
TTC39A-215ENST00000527205 ERICH2A1L162 156 aa22.72■■□□□ 1.23
TTC39A-215ENST00000527205 PARP1P09874 1014 aaKnown RBP22.72■■□□□ 1.23
TTC39A-215ENST00000527205 ALAS1P13196 640 aa22.72■■□□□ 1.23
TTC39A-215ENST00000527205 MCM5P33992 734 aa22.72■■□□□ 1.23
TTC39A-215ENST00000527205 ZNF792Q3KQV3 632 aa22.72■■□□□ 1.23
TTC39A-215ENST00000527205 TSGA10IPQ3SY00 556 aa22.72■■□□□ 1.23
TTC39A-215ENST00000527205 MYL10Q9BUA6 226 aa22.72■■□□□ 1.23
TTC39A-215ENST00000527205 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.72■■□□□ 1.23
TTC39A-215ENST00000527205 CCPG1Q9ULG6 757 aa22.72■■□□□ 1.23
TTC39A-215ENST00000527205 SNX14Q9Y5W7 946 aa22.72■■□□□ 1.23
TTC39A-215ENST00000527205 ICAM1P05362 532 aa22.71■■□□□ 1.23
TTC39A-215ENST00000527205 CCND3P30281 292 aaPredicted RBP22.71■■□□□ 1.23
TTC39A-215ENST00000527205 CYP2C19P33261 490 aa22.71■■□□□ 1.23
TTC39A-215ENST00000527205 TROAPQ12815 778 aa22.71■■□□□ 1.23
TTC39A-215ENST00000527205 KCTD2Q14681 263 aa22.71■■□□□ 1.23
TTC39A-215ENST00000527205 GRM4Q14833 912 aa22.71■■□□□ 1.23
TTC39A-215ENST00000527205 SART3Q15020 963 aaKnown RBP22.71■■□□□ 1.23
TTC39A-215ENST00000527205 TRMT44Q8IYL2 757 aaKnown RBP22.71■■□□□ 1.23
TTC39A-215ENST00000527205 ADGRF4Q8IZF3 695 aa22.71■■□□□ 1.23
TTC39A-215ENST00000527205 CHST13Q8NET6 341 aa22.71■■□□□ 1.23
TTC39A-215ENST00000527205 MAML3Q96JK9 1138 aa22.71■■□□□ 1.23
TTC39A-215ENST00000527205 FGD4Q96M96 766 aa22.71■■□□□ 1.23
TTC39A-215ENST00000527205 TRERF1Q96PN7 1200 aa22.71■■□□□ 1.23
TTC39A-215ENST00000527205 NEK1Q96PY6 1258 aa22.71■■□□□ 1.23
TTC39A-215ENST00000527205 PAK6Q9NQU5 681 aaPredicted RBP22.71■■□□□ 1.23
TTC39A-215ENST00000527205 DNAJC25-GNG10A0A024R161 153 aa22.7■■□□□ 1.22
TTC39A-215ENST00000527205 PALM3A6NDB9 673 aaPredicted RBP22.7■■□□□ 1.22
TTC39A-215ENST00000527205 REC8O95072 547 aa22.7■■□□□ 1.22
TTC39A-215ENST00000527205 CPA1P15085 419 aa22.7■■□□□ 1.22
TTC39A-215ENST00000527205 TRPV1Q8NER1 839 aa22.7■■□□□ 1.22
TTC39A-215ENST00000527205 ACAD9Q9H845 621 aa22.7■■□□□ 1.22
TTC39A-215ENST00000527205 ALPK3Q96L96 1907 aa22.69■■□□□ 1.22
TTC39A-215ENST00000527205 RPTORQ8N122 1335 aa22.69■■□□□ 1.22
TTC39A-215ENST00000527205 GJB1P08034 283 aa22.69■■□□□ 1.22
TTC39A-215ENST00000527205 EXOSC10Q01780 885 aaKnown RBP22.69■■□□□ 1.22
TTC39A-215ENST00000527205 CDC37Q16543 378 aaPredicted RBP22.69■■□□□ 1.22
TTC39A-215ENST00000527205 OLFML2BQ68BL8 750 aa22.69■■□□□ 1.22
TTC39A-215ENST00000527205 RAB11FIP4Q86YS3 637 aa22.69■■□□□ 1.22
TTC39A-215ENST00000527205 ZNF654Q8IZM8 581 aa22.69■■□□□ 1.22
TTC39A-215ENST00000527205 TMEM87BQ96K49 555 aa22.69■■□□□ 1.22
TTC39A-215ENST00000527205 MTA3Q9BTC8 594 aa22.69■■□□□ 1.22
TTC39A-215ENST00000527205 JMJD4Q9H9V9 463 aa22.69■■□□□ 1.22
TTC39A-215ENST00000527205 A1CFQ9NQ94 594 aaKnown RBP22.69■■□□□ 1.22
TTC39A-215ENST00000527205 GJA8P48165 433 aa22.68■■□□□ 1.22
TTC39A-215ENST00000527205 TKFCQ3LXA3 575 aa22.68■■□□□ 1.22
TTC39A-215ENST00000527205 U2AF1L4Q8WU68 220 aaKnown RBP22.68■■□□□ 1.22
TTC39A-215ENST00000527205 DEFB118Q96PH6 123 aa22.68■■□□□ 1.22
TTC39A-215ENST00000527205 USP26Q9BXU7 913 aa22.68■■□□□ 1.22
TTC39A-215ENST00000527205 VAT1LQ9HCJ6 419 aa22.68■■□□□ 1.22
TTC39A-215ENST00000527205 HMX1Q9NP08 348 aaPredicted RBP22.68■■□□□ 1.22
TTC39A-215ENST00000527205 FBXO40Q9UH90 709 aa22.68■■□□□ 1.22
TTC39A-215ENST00000527205 MKI67P46013 3256 aaKnown RBP22.67■■□□□ 1.22
TTC39A-215ENST00000527205 TNRC18O15417 2968 aaPredicted RBP22.67■■□□□ 1.22
TTC39A-215ENST00000527205 WDR19Q8NEZ3 1342 aa22.67■■□□□ 1.22
TTC39A-215ENST00000527205 KLRF2D3W0D1 207 aa22.67■■□□□ 1.22
TTC39A-215ENST00000527205 NFIBO00712 420 aa22.67■■□□□ 1.22
TTC39A-215ENST00000527205 RXRAP19793 462 aa22.67■■□□□ 1.22
TTC39A-215ENST00000527205 QRICH1Q2TAL8 776 aa22.67■■□□□ 1.22
TTC39A-215ENST00000527205 MFSD14CQ5VZR4 134 aa22.67■■□□□ 1.22
TTC39A-215ENST00000527205 ANKRD35Q8N283 1001 aa22.67■■□□□ 1.22
TTC39A-215ENST00000527205 NUP133Q8WUM0 1156 aa22.67■■□□□ 1.22
TTC39A-215ENST00000527205 DDX11Q96FC9 970 aa22.67■■□□□ 1.22
TTC39A-215ENST00000527205 CYBAP13498 195 aa22.66■■□□□ 1.22
TTC39A-215ENST00000527205 CNTN2Q02246 1040 aa22.66■■□□□ 1.22
TTC39A-215ENST00000527205 USH1GQ495M9 461 aa22.66■■□□□ 1.22
TTC39A-215ENST00000527205 PRAMEF19Q5SWL8 479 aa22.66■■□□□ 1.22
TTC39A-215ENST00000527205 CATIPQ7Z7H3 387 aa22.66■■□□□ 1.22
TTC39A-215ENST00000527205 CLEC4DQ8WXI8 215 aa22.66■■□□□ 1.22
TTC39A-215ENST00000527205 JAKMIP1Q96N16 626 aaKnown RBP22.66■■□□□ 1.22
TTC39A-215ENST00000527205 ASTN1O14525 1302 aa22.65■■□□□ 1.22
TTC39A-215ENST00000527205 CYTH3O43739 400 aa22.65■■□□□ 1.22
TTC39A-215ENST00000527205 DDAH1O94760 285 aa22.65■■□□□ 1.22
TTC39A-215ENST00000527205 SGPL1O95470 568 aa22.65■■□□□ 1.22
TTC39A-215ENST00000527205 LIFRP42702 1097 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms