RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 ALAS1P13196 640 aa21.5■■□□□ 1.03
SREK1-207ENST00000520058 SEC23AQ15436 765 aa21.5■■□□□ 1.03
SREK1-207ENST00000520058 OLFML2BQ68BL8 750 aa21.5■■□□□ 1.03
SREK1-207ENST00000520058 TTBK2Q6IQ55 1244 aa21.5■■□□□ 1.03
SREK1-207ENST00000520058 STOX1Q6ZVD7 989 aa21.5■■□□□ 1.03
SREK1-207ENST00000520058 MB21D2Q8IYB1 491 aaPredicted RBP21.5■■□□□ 1.03
SREK1-207ENST00000520058 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.5■■□□□ 1.031e-5■■■□□ 18
SREK1-207ENST00000520058 RANBP17Q9H2T7 1088 aaKnown RBP21.5■■□□□ 1.03
SREK1-207ENST00000520058 HOMER2Q9NSB8 354 aa21.5■■□□□ 1.03
SREK1-207ENST00000520058 CCPG1Q9ULG6 757 aa21.5■■□□□ 1.03
SREK1-207ENST00000520058 CENPFP49454 3210 aa21.49■■□□□ 1.03
SREK1-207ENST00000520058 GJA8P48165 433 aa21.49■■□□□ 1.03
SREK1-207ENST00000520058 CCL14Q16627 93 aa21.49■■□□□ 1.03
SREK1-207ENST00000520058 RASGRP2Q7LDG7 609 aa21.49■■□□□ 1.03
SREK1-207ENST00000520058 NPLOC4Q8TAT6 608 aa21.49■■□□□ 1.03
SREK1-207ENST00000520058 TRERF1Q96PN7 1200 aa21.49■■□□□ 1.03
SREK1-207ENST00000520058 RNF146Q9NTX7 359 aa21.49■■□□□ 1.03
SREK1-207ENST00000520058 RIPK3Q9Y572 518 aa21.49■■□□□ 1.03
SREK1-207ENST00000520058 SMCHD1A6NHR9 2005 aa21.49■■□□□ 1.03
SREK1-207ENST00000520058 EPB41L2O43491 1005 aaKnown RBP21.48■■□□□ 1.03
SREK1-207ENST00000520058 PRC1O43663 620 aa21.48■■□□□ 1.03
SREK1-207ENST00000520058 SGPL1O95470 568 aa21.48■■□□□ 1.03
SREK1-207ENST00000520058 TFRCP02786 760 aaKnown RBP21.48■■□□□ 1.03
SREK1-207ENST00000520058 HMGB1P09429 215 aaKnown RBP21.48■■□□□ 1.03
SREK1-207ENST00000520058 GOLGA8HP0CJ92 632 aa21.48■■□□□ 1.03
SREK1-207ENST00000520058 NFXL1Q6ZNB6 911 aa21.48■■□□□ 1.03
SREK1-207ENST00000520058 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.48■■□□□ 1.03
SREK1-207ENST00000520058 CHST3Q7LGC8 479 aa21.48■■□□□ 1.03
SREK1-207ENST00000520058 AGBL1Q96MI9 1066 aa21.48■■□□□ 1.03
SREK1-207ENST00000520058 DEFB118Q96PH6 123 aa21.48■■□□□ 1.03
SREK1-207ENST00000520058 NEK1Q96PY6 1258 aa21.48■■□□□ 1.03
SREK1-207ENST00000520058 PAK6Q9NQU5 681 aaPredicted RBP21.48■■□□□ 1.03
SREK1-207ENST00000520058 PFASO15067 1338 aa21.48■■□□□ 1.03
SREK1-207ENST00000520058 CCDC69A6NI79 296 aa21.47■■□□□ 1.03
SREK1-207ENST00000520058 COBLO75128 1261 aa21.47■■□□□ 1.03
SREK1-207ENST00000520058 EN2P19622 333 aaPredicted RBP21.47■■□□□ 1.03
SREK1-207ENST00000520058 CACNB2Q08289 660 aaPredicted RBP21.47■■□□□ 1.03
SREK1-207ENST00000520058 MSL3Q8N5Y2 521 aaKnown RBP21.47■■□□□ 1.03
SREK1-207ENST00000520058 U2AF1L4Q8WU68 220 aaKnown RBP21.47■■□□□ 1.03
SREK1-207ENST00000520058 MAML3Q96JK9 1138 aa21.47■■□□□ 1.03
SREK1-207ENST00000520058 TAF6LQ9Y6J9 622 aa21.47■■□□□ 1.03
SREK1-207ENST00000520058 ZNF536O15090 1300 aa21.47■■□□□ 1.03
SREK1-207ENST00000520058 MSCO60682 206 aa21.46■■□□□ 1.03
SREK1-207ENST00000520058 PGK2P07205 417 aa21.46■■□□□ 1.03
SREK1-207ENST00000520058 CNGA1P29973 690 aa21.46■■□□□ 1.03
SREK1-207ENST00000520058 TRAF1Q13077 416 aa21.46■■□□□ 1.03
SREK1-207ENST00000520058 TSGA10IPQ3SY00 556 aa21.46■■□□□ 1.03
SREK1-207ENST00000520058 MAP3K21Q5TCX8 1036 aa21.46■■□□□ 1.03
SREK1-207ENST00000520058 SYNE3Q6ZMZ3 975 aa21.46■■□□□ 1.03
SREK1-207ENST00000520058 MCM3APO60318 1980 aa21.45■■□□□ 1.02
SREK1-207ENST00000520058 CALM1P0DP23 149 aa21.45■■□□□ 1.02
SREK1-207ENST00000520058 CALM2P0DP24 149 aa21.45■■□□□ 1.02
SREK1-207ENST00000520058 CALM3P0DP25 149 aa21.45■■□□□ 1.02
SREK1-207ENST00000520058 KIF5BP33176 963 aa21.45■■□□□ 1.02
SREK1-207ENST00000520058 SNAP25P60880 206 aa21.45■■□□□ 1.02
SREK1-207ENST00000520058 TRIM32Q13049 653 aa21.45■■□□□ 1.02
SREK1-207ENST00000520058 CTCFLQ8NI51 663 aaPredicted RBP21.45■■□□□ 1.02
SREK1-207ENST00000520058 IGDCC4Q8TDY8 1250 aa21.45■■□□□ 1.02
SREK1-207ENST00000520058 UBA5Q9GZZ9 404 aa21.45■■□□□ 1.02
SREK1-207ENST00000520058 FLRT1Q9NZU1 646 aa21.45■■□□□ 1.02
SREK1-207ENST00000520058 NRBP1Q9UHY1 535 aa21.45■■□□□ 1.02
SREK1-207ENST00000520058 CNPY2Q9Y2B0 182 aa21.45■■□□□ 1.02
SREK1-207ENST00000520058 WDR19Q8NEZ3 1342 aa21.45■■□□□ 1.02
SREK1-207ENST00000520058 FRMPD3Q5JV73 1810 aa21.45■■□□□ 1.02
SREK1-207ENST00000520058 KLRF2D3W0D1 207 aa21.44■■□□□ 1.02
SREK1-207ENST00000520058 CYP2C19P33261 490 aa21.44■■□□□ 1.02
SREK1-207ENST00000520058 LIFRP42702 1097 aa21.44■■□□□ 1.02
SREK1-207ENST00000520058 ANTXR2P58335 489 aa21.44■■□□□ 1.02
SREK1-207ENST00000520058 FGD1P98174 961 aa21.44■■□□□ 1.02
SREK1-207ENST00000520058 ZNF792Q3KQV3 632 aa21.44■■□□□ 1.02
SREK1-207ENST00000520058 ZNF467Q7Z7K2 595 aaPredicted RBP21.44■■□□□ 1.02
SREK1-207ENST00000520058 ADGRF4Q8IZF3 695 aa21.44■■□□□ 1.02
SREK1-207ENST00000520058 NUP133Q8WUM0 1156 aa21.44■■□□□ 1.02
SREK1-207ENST00000520058 MAP3K14Q99558 947 aa21.44■■□□□ 1.02
SREK1-207ENST00000520058 TINF2Q9BSI4 451 aa21.44■■□□□ 1.02
SREK1-207ENST00000520058 BAZ2BQ9UIF8 2168 aaKnown RBP21.43■■□□□ 1.02
SREK1-207ENST00000520058 POTEB2H3BUK9 544 aa21.43■■□□□ 1.02
SREK1-207ENST00000520058 DDAH1O94760 285 aa21.43■■□□□ 1.02
SREK1-207ENST00000520058 HSPA4P34932 840 aa21.43■■□□□ 1.02
SREK1-207ENST00000520058 GRM4Q14833 912 aa21.43■■□□□ 1.02
SREK1-207ENST00000520058 CDC37Q16543 378 aaPredicted RBP21.43■■□□□ 1.02
SREK1-207ENST00000520058 DHX32Q7L7V1 743 aaKnown RBP21.43■■□□□ 1.02
SREK1-207ENST00000520058 ANKLE1Q8NAG6 615 aa21.43■■□□□ 1.02
SREK1-207ENST00000520058 LY9Q9HBG7 655 aa21.43■■□□□ 1.02
SREK1-207ENST00000520058 VAT1LQ9HCJ6 419 aa21.43■■□□□ 1.02
SREK1-207ENST00000520058 PALM3A6NDB9 673 aaPredicted RBP21.42■■□□□ 1.02
SREK1-207ENST00000520058 ABCB11O95342 1321 aa21.42■■□□□ 1.02
SREK1-207ENST00000520058 PSMA5P28066 241 aa21.42■■□□□ 1.02
SREK1-207ENST00000520058 GNAQP50148 359 aa21.42■■□□□ 1.02
SREK1-207ENST00000520058 NSMFQ6X4W1 530 aa21.42■■□□□ 1.02
SREK1-207ENST00000520058 ZNF654Q8IZM8 581 aa21.42■■□□□ 1.02
SREK1-207ENST00000520058 MPHOSPH6Q99547 160 aaKnown RBP21.42■■□□□ 1.02
SREK1-207ENST00000520058 MAF1Q9H063 256 aa21.42■■□□□ 1.02
SREK1-207ENST00000520058 SLC12A7Q9Y666 1083 aa21.42■■□□□ 1.02
SREK1-207ENST00000520058 SYNGAP1Q96PV0 1343 aa21.41■■□□□ 1.02
SREK1-207ENST00000520058 DNAJC25-GNG10A0A024R161 153 aa21.41■■□□□ 1.02
SREK1-207ENST00000520058 ASB14A6NK59 587 aa21.41■■□□□ 1.02
SREK1-207ENST00000520058 SH2B2O14492 632 aaPredicted RBP21.41■■□□□ 1.02
SREK1-207ENST00000520058 TROAPQ12815 778 aa21.41■■□□□ 1.02
SREK1-207ENST00000520058 LZTS2Q9BRK4 669 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms