RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 FBXO40Q9UH90 709 aa18.62■□□□□ 0.57
DDX41-214ENST00000512334 ZNF536O15090 1300 aa18.62■□□□□ 0.57
DDX41-214ENST00000512334 ZNFX1Q9P2E3 1918 aaKnown RBP18.62■□□□□ 0.57
DDX41-214ENST00000512334 BRCA2P51587 3418 aa18.62■□□□□ 0.57
DDX41-214ENST00000512334 TFRCP02786 760 aaKnown RBP18.61■□□□□ 0.57
DDX41-214ENST00000512334 PARP1P09874 1014 aaKnown RBP18.61■□□□□ 0.57
DDX41-214ENST00000512334 ALAS1P13196 640 aa18.61■□□□□ 0.57
DDX41-214ENST00000512334 CYP2C19P33261 490 aa18.61■□□□□ 0.57
DDX41-214ENST00000512334 WTAPQ15007 396 aa18.61■□□□□ 0.57
DDX41-214ENST00000512334 TMEM67Q5HYA8 995 aa18.61■□□□□ 0.57
DDX41-214ENST00000512334 MAP3K21Q5TCX8 1036 aa18.61■□□□□ 0.57
DDX41-214ENST00000512334 MB21D2Q8IYB1 491 aaPredicted RBP18.61■□□□□ 0.57
DDX41-214ENST00000512334 ANKRD35Q8N283 1001 aa18.61■□□□□ 0.57
DDX41-214ENST00000512334 UBA5Q9GZZ9 404 aa18.61■□□□□ 0.57
DDX41-214ENST00000512334 RANBP17Q9H2T7 1088 aaKnown RBP18.61■□□□□ 0.57
DDX41-214ENST00000512334 PAK6Q9NQU5 681 aaPredicted RBP18.61■□□□□ 0.57
DDX41-214ENST00000512334 RNF146Q9NTX7 359 aa18.61■□□□□ 0.57
DDX41-214ENST00000512334 CCPG1Q9ULG6 757 aa18.61■□□□□ 0.57
DDX41-214ENST00000512334 SGPL1O95470 568 aa18.6■□□□□ 0.57
DDX41-214ENST00000512334 TKFCQ3LXA3 575 aa18.6■□□□□ 0.57
DDX41-214ENST00000512334 ASPRV1Q53RT3 343 aa18.6■□□□□ 0.57
DDX41-214ENST00000512334 OLFML2BQ68BL8 750 aa18.6■□□□□ 0.57
DDX41-214ENST00000512334 SHISA4Q96DD7 197 aa18.6■□□□□ 0.57
DDX41-214ENST00000512334 MAML3Q96JK9 1138 aa18.6■□□□□ 0.57
DDX41-214ENST00000512334 TRERF1Q96PN7 1200 aa18.6■□□□□ 0.57
DDX41-214ENST00000512334 CPVLQ9H3G5 476 aa18.6■□□□□ 0.57
DDX41-214ENST00000512334 ACAD9Q9H845 621 aa18.6■□□□□ 0.57
DDX41-214ENST00000512334 DHX16O60231 1041 aaKnown RBP18.59■□□□□ 0.57
DDX41-214ENST00000512334 ICAM1P05362 532 aa18.59■□□□□ 0.57
DDX41-214ENST00000512334 CNGA1P29973 690 aa18.59■□□□□ 0.57
DDX41-214ENST00000512334 CCND3P30281 292 aaPredicted RBP18.59■□□□□ 0.57
DDX41-214ENST00000512334 ANTXR2P58335 489 aa18.59■□□□□ 0.57
DDX41-214ENST00000512334 PLXNA1Q9UIW2 1896 aa18.58■□□□□ 0.57
DDX41-214ENST00000512334 PRC1O43663 620 aa18.58■□□□□ 0.56
DDX41-214ENST00000512334 TAL1P17542 331 aaPredicted RBP18.58■□□□□ 0.56
DDX41-214ENST00000512334 MCM5P33992 734 aa18.58■□□□□ 0.56
DDX41-214ENST00000512334 ZNF792Q3KQV3 632 aa18.58■□□□□ 0.56
DDX41-214ENST00000512334 SENP2Q9HC62 589 aa18.58■□□□□ 0.56
DDX41-214ENST00000512334 DIS3Q9Y2L1 958 aaKnown RBP18.58■□□□□ 0.56
DDX41-214ENST00000512334 MUM1L1Q5H9M0 696 aa18.57■□□□□ 0.56
DDX41-214ENST00000512334 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.57■□□□□ 0.56
DDX41-214ENST00000512334 CATIPQ7Z7H3 387 aa18.57■□□□□ 0.56
DDX41-214ENST00000512334 IGDCC4Q8TDY8 1250 aa18.57■□□□□ 0.56
DDX41-214ENST00000512334 REC8O95072 547 aa18.56■□□□□ 0.56
DDX41-214ENST00000512334 NFXL1Q6ZNB6 911 aa18.56■□□□□ 0.56
DDX41-214ENST00000512334 ADGRF4Q8IZF3 695 aa18.56■□□□□ 0.56
DDX41-214ENST00000512334 STAG2Q8N3U4 1231 aa18.56■□□□□ 0.56
DDX41-214ENST00000512334 NUP133Q8WUM0 1156 aa18.56■□□□□ 0.56
DDX41-214ENST00000512334 VAT1LQ9HCJ6 419 aa18.56■□□□□ 0.56
DDX41-214ENST00000512334 PNMA2Q9UL42 364 aa18.56■□□□□ 0.56
DDX41-214ENST00000512334 DNAJC25-GNG10A0A024R161 153 aa18.55■□□□□ 0.56
DDX41-214ENST00000512334 POTEB2H3BUK9 544 aa18.55■□□□□ 0.56
DDX41-214ENST00000512334 FARP2O94887 1054 aaPredicted RBP18.55■□□□□ 0.56
DDX41-214ENST00000512334 CYBAP13498 195 aa18.55■□□□□ 0.56
DDX41-214ENST00000512334 CDC37Q16543 378 aaPredicted RBP18.55■□□□□ 0.56
DDX41-214ENST00000512334 USH1GQ495M9 461 aa18.55■□□□□ 0.56
DDX41-214ENST00000512334 NSMFQ6X4W1 530 aa18.55■□□□□ 0.56
DDX41-214ENST00000512334 TRPV1Q8NER1 839 aa18.55■□□□□ 0.56
DDX41-214ENST00000512334 TMEM87BQ96K49 555 aa18.55■□□□□ 0.56
DDX41-214ENST00000512334 NEK1Q96PY6 1258 aa18.55■□□□□ 0.56
DDX41-214ENST00000512334 TINF2Q9BSI4 451 aa18.55■□□□□ 0.56
DDX41-214ENST00000512334 LRRC2Q9BYS8 371 aa18.55■□□□□ 0.56
DDX41-214ENST00000512334 CRISPLD2Q9H0B8 497 aa18.55■□□□□ 0.56
DDX41-214ENST00000512334 LY9Q9HBG7 655 aa18.55■□□□□ 0.56
DDX41-214ENST00000512334 A1CFQ9NQ94 594 aaKnown RBP18.55■□□□□ 0.56
DDX41-214ENST00000512334 GPHNQ9NQX3 736 aaPredicted RBP18.55■□□□□ 0.56
DDX41-214ENST00000512334 MAD2L2Q9UI95 211 aa18.55■□□□□ 0.56
DDX41-214ENST00000512334 PFASO15067 1338 aa18.54■□□□□ 0.56
DDX41-214ENST00000512334 CCDC69A6NI79 296 aa18.54■□□□□ 0.56
DDX41-214ENST00000512334 KLRF2D3W0D1 207 aa18.54■□□□□ 0.56
DDX41-214ENST00000512334 SH2B2O14492 632 aaPredicted RBP18.54■□□□□ 0.56
DDX41-214ENST00000512334 IGHA2P01877 340 aa18.54■□□□□ 0.56
DDX41-214ENST00000512334 COL9A3Q14050 684 aaPredicted RBP18.54■□□□□ 0.56
DDX41-214ENST00000512334 KRT32Q14532 448 aa18.54■□□□□ 0.56
DDX41-214ENST00000512334 GRM4Q14833 912 aa18.54■□□□□ 0.56
DDX41-214ENST00000512334 PRAMEF19Q5SWL8 479 aa18.54■□□□□ 0.56
DDX41-214ENST00000512334 RASEFQ8IZ41 740 aa18.54■□□□□ 0.56
DDX41-214ENST00000512334 MTA3Q9BTC8 594 aa18.54■□□□□ 0.56
DDX41-214ENST00000512334 DDX20Q9UHI6 824 aaKnown RBP18.54■□□□□ 0.56
DDX41-214ENST00000512334 SMCHD1A6NHR9 2005 aa18.54■□□□□ 0.56
DDX41-214ENST00000512334 WDR19Q8NEZ3 1342 aa18.53■□□□□ 0.56
DDX41-214ENST00000512334 PALM3A6NDB9 673 aaPredicted RBP18.53■□□□□ 0.56
DDX41-214ENST00000512334 CAPN2P17655 700 aa18.53■□□□□ 0.56
DDX41-214ENST00000512334 CNTN2Q02246 1040 aa18.53■□□□□ 0.56
DDX41-214ENST00000512334 ADCK5Q3MIX3 580 aa18.53■□□□□ 0.56
DDX41-214ENST00000512334 ZNF654Q8IZM8 581 aa18.53■□□□□ 0.56
DDX41-214ENST00000512334 TMTC2Q8N394 836 aa18.53■□□□□ 0.56
DDX41-214ENST00000512334 MYL10Q9BUA6 226 aa18.53■□□□□ 0.56
DDX41-214ENST00000512334 CNPY2Q9Y2B0 182 aa18.53■□□□□ 0.56
DDX41-214ENST00000512334 PTPDC1A2A3K4 754 aa18.52■□□□□ 0.56
DDX41-214ENST00000512334 NFIBO00712 420 aa18.52■□□□□ 0.56
DDX41-214ENST00000512334 MSCO60682 206 aa18.52■□□□□ 0.56
DDX41-214ENST00000512334 TROAPQ12815 778 aa18.52■□□□□ 0.56
DDX41-214ENST00000512334 QRICH1Q2TAL8 776 aa18.52■□□□□ 0.56
DDX41-214ENST00000512334 TSGA10IPQ3SY00 556 aa18.52■□□□□ 0.56
DDX41-214ENST00000512334 ANO1Q5XXA6 986 aa18.52■□□□□ 0.56
DDX41-214ENST00000512334 LHX8Q68G74 356 aa18.52■□□□□ 0.56
DDX41-214ENST00000512334 ZNF467Q7Z7K2 595 aaPredicted RBP18.52■□□□□ 0.56
DDX41-214ENST00000512334 MSL3Q8N5Y2 521 aaKnown RBP18.52■□□□□ 0.56
DDX41-214ENST00000512334 JMJD4Q9H9V9 463 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms