RNA–Protein interactions for RNA: ENST00000498396.2

SLFN11-206, Transcript of schlafen family member 11, humanhuman

TSL 3

Gene SLFN11, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFN11-206ENST00000498396 SEC24BO95487 1268 aa16.07■□□□□ 0.16
SLFN11-206ENST00000498396 SLC25A27O95847 323 aa16.07■□□□□ 0.16
SLFN11-206ENST00000498396 RXRAP19793 462 aa16.07■□□□□ 0.16
SLFN11-206ENST00000498396 MCM5P33992 734 aa16.07■□□□□ 0.16
SLFN11-206ENST00000498396 TROAPQ12815 778 aa16.07■□□□□ 0.16
SLFN11-206ENST00000498396 TSGA10IPQ3SY00 556 aa16.07■□□□□ 0.16
SLFN11-206ENST00000498396 MUM1L1Q5H9M0 696 aa16.07■□□□□ 0.16
SLFN11-206ENST00000498396 RNF20Q5VTR2 975 aa16.07■□□□□ 0.16
SLFN11-206ENST00000498396 NBPF11Q86T75 865 aa16.07■□□□□ 0.16
SLFN11-206ENST00000498396 PXYLP1Q8TE99 480 aa16.07■□□□□ 0.16
SLFN11-206ENST00000498396 NEK1Q96PY6 1258 aa16.07■□□□□ 0.16
SLFN11-206ENST00000498396 MMP19Q99542 508 aa16.07■□□□□ 0.16
SLFN11-206ENST00000498396 USP26Q9BXU7 913 aa16.07■□□□□ 0.16
SLFN11-206ENST00000498396 CTDP1Q9Y5B0 961 aaPredicted RBP16.07■□□□□ 0.16
SLFN11-206ENST00000498396 ZNF236Q9UL36 1845 aa16.06■□□□□ 0.16
SLFN11-206ENST00000498396 REC8O95072 547 aa16.06■□□□□ 0.16
SLFN11-206ENST00000498396 IGHA2P01877 340 aa16.06■□□□□ 0.16
SLFN11-206ENST00000498396 HMGCRP04035 888 aa16.06■□□□□ 0.16
SLFN11-206ENST00000498396 HOXC6P09630 235 aa16.06■□□□□ 0.16
SLFN11-206ENST00000498396 PARP1P09874 1014 aaKnown RBP16.06■□□□□ 0.16
SLFN11-206ENST00000498396 CCL5P13501 91 aa16.06■□□□□ 0.16
SLFN11-206ENST00000498396 ZKSCAN1P17029 563 aaPredicted RBP16.06■□□□□ 0.16
SLFN11-206ENST00000498396 OAZ1P54368 228 aa16.06■□□□□ 0.16
SLFN11-206ENST00000498396 EXOSC10Q01780 885 aaKnown RBP16.06■□□□□ 0.16
SLFN11-206ENST00000498396 GRM4Q14833 912 aa16.06■□□□□ 0.16
SLFN11-206ENST00000498396 GPATCH4Q5T3I0 446 aaKnown RBP16.06■□□□□ 0.16
SLFN11-206ENST00000498396 ADGRF4Q8IZF3 695 aa16.06■□□□□ 0.16
SLFN11-206ENST00000498396 JAKMIP1Q96N16 626 aaKnown RBP16.06■□□□□ 0.16
SLFN11-206ENST00000498396 RNF146Q9NTX7 359 aa16.06■□□□□ 0.16
SLFN11-206ENST00000498396 ERICH2A1L162 156 aa16.05■□□□□ 0.16
SLFN11-206ENST00000498396 PALM3A6NDB9 673 aaPredicted RBP16.05■□□□□ 0.16
SLFN11-206ENST00000498396 ICAM1P05362 532 aa16.05■□□□□ 0.16
SLFN11-206ENST00000498396 FCER1AP12319 257 aa16.05■□□□□ 0.16
SLFN11-206ENST00000498396 XRCC5P13010 732 aaKnown RBP16.05■□□□□ 0.16
SLFN11-206ENST00000498396 ALAS1P13196 640 aa16.05■□□□□ 0.16
SLFN11-206ENST00000498396 PRKAR2AP13861 404 aaKnown RBP16.05■□□□□ 0.16
SLFN11-206ENST00000498396 CYP2C19P33261 490 aa16.05■□□□□ 0.16
SLFN11-206ENST00000498396 SART3Q15020 963 aaKnown RBP16.05■□□□□ 0.16
SLFN11-206ENST00000498396 ASPRV1Q53RT3 343 aa16.05■□□□□ 0.16
SLFN11-206ENST00000498396 ZNF654Q8IZM8 581 aa16.05■□□□□ 0.16
SLFN11-206ENST00000498396 FGD4Q96M96 766 aa16.05■□□□□ 0.16
SLFN11-206ENST00000498396 JMJD4Q9H9V9 463 aa16.05■□□□□ 0.16
SLFN11-206ENST00000498396 VAT1LQ9HCJ6 419 aa16.05■□□□□ 0.16
SLFN11-206ENST00000498396 CCPG1Q9ULG6 757 aa16.05■□□□□ 0.16
SLFN11-206ENST00000498396 DDX49Q9Y6V7 483 aaKnown RBP16.05■□□□□ 0.16
SLFN11-206ENST00000498396 TNRC18O15417 2968 aaPredicted RBP16.05■□□□□ 0.16
SLFN11-206ENST00000498396 SMCHD1A6NHR9 2005 aa16.04■□□□□ 0.16
SLFN11-206ENST00000498396 STRNO43815 780 aa16.04■□□□□ 0.16
SLFN11-206ENST00000498396 EN2P19622 333 aaPredicted RBP16.04■□□□□ 0.16
SLFN11-206ENST00000498396 CACNB2Q08289 660 aaPredicted RBP16.04■□□□□ 0.16
SLFN11-206ENST00000498396 CDC37Q16543 378 aaPredicted RBP16.04■□□□□ 0.16
SLFN11-206ENST00000498396 MAP3K21Q5TCX8 1036 aa16.04■□□□□ 0.16
SLFN11-206ENST00000498396 DPP9Q86TI2 863 aa16.04■□□□□ 0.16
SLFN11-206ENST00000498396 CCDC144CPQ8IYA2 1237 aa16.04■□□□□ 0.16
SLFN11-206ENST00000498396 ABRAQ8N0Z2 381 aa16.04■□□□□ 0.16
SLFN11-206ENST00000498396 TRPV1Q8NER1 839 aa16.04■□□□□ 0.16
SLFN11-206ENST00000498396 NUP133Q8WUM0 1156 aa16.04■□□□□ 0.16
SLFN11-206ENST00000498396 SHISA4Q96DD7 197 aa16.04■□□□□ 0.16
SLFN11-206ENST00000498396 TRERF1Q96PN7 1200 aa16.04■□□□□ 0.16
SLFN11-206ENST00000498396 PURBQ96QR8 312 aaKnown RBP16.04■□□□□ 0.16
SLFN11-206ENST00000498396 BRPF3Q9ULD4 1205 aa16.04■□□□□ 0.16
SLFN11-206ENST00000498396 KLRF2D3W0D1 207 aa16.03■□□□□ 0.16
SLFN11-206ENST00000498396 NFIBO00712 420 aa16.03■□□□□ 0.16
SLFN11-206ENST00000498396 CYTH3O43739 400 aa16.03■□□□□ 0.16
SLFN11-206ENST00000498396 PPP1R11O60927 126 aaPredicted RBP16.03■□□□□ 0.16
SLFN11-206ENST00000498396 FDX1P10109 184 aa16.03■□□□□ 0.16
SLFN11-206ENST00000498396 CCND3P30281 292 aaPredicted RBP16.03■□□□□ 0.16
SLFN11-206ENST00000498396 CNTN2Q02246 1040 aa16.03■□□□□ 0.16
SLFN11-206ENST00000498396 KCTD2Q14681 263 aa16.03■□□□□ 0.16
SLFN11-206ENST00000498396 QRICH1Q2TAL8 776 aa16.03■□□□□ 0.16
SLFN11-206ENST00000498396 ZNF792Q3KQV3 632 aa16.03■□□□□ 0.16
SLFN11-206ENST00000498396 NFXL1Q6ZNB6 911 aa16.03■□□□□ 0.16
SLFN11-206ENST00000498396 DHX32Q7L7V1 743 aaKnown RBP16.03■□□□□ 0.16
SLFN11-206ENST00000498396 CATIPQ7Z7H3 387 aa16.03■□□□□ 0.16
SLFN11-206ENST00000498396 CMTR1Q8N1G2 835 aaKnown RBP16.03■□□□□ 0.16
SLFN11-206ENST00000498396 MAML3Q96JK9 1138 aa16.03■□□□□ 0.16
SLFN11-206ENST00000498396 TMEM87BQ96K49 555 aa16.03■□□□□ 0.16
SLFN11-206ENST00000498396 RNF208Q9H0X6 261 aa16.03■□□□□ 0.16
SLFN11-206ENST00000498396 A1CFQ9NQ94 594 aaKnown RBP16.03■□□□□ 0.16
SLFN11-206ENST00000498396 ASTN1O14525 1302 aa16.02■□□□□ 0.16
SLFN11-206ENST00000498396 DNAJC25-GNG10A0A024R161 153 aa16.02■□□□□ 0.16
SLFN11-206ENST00000498396 PLEKHA8P1O95397 391 aa16.02■□□□□ 0.16
SLFN11-206ENST00000498396 COPB2P35606 906 aa16.02■□□□□ 0.16
SLFN11-206ENST00000498396 UBXN2AP68543 259 aa16.02■□□□□ 0.16
SLFN11-206ENST00000498396 KRT32Q14532 448 aa16.02■□□□□ 0.16
SLFN11-206ENST00000498396 USH1GQ495M9 461 aa16.02■□□□□ 0.16
SLFN11-206ENST00000498396 PRAMEF19Q5SWL8 479 aa16.02■□□□□ 0.16
SLFN11-206ENST00000498396 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.02■□□□□ 0.16
SLFN11-206ENST00000498396 CHST13Q8NET6 341 aa16.02■□□□□ 0.16
SLFN11-206ENST00000498396 CLEC4DQ8WXI8 215 aa16.02■□□□□ 0.16
SLFN11-206ENST00000498396 ACAD9Q9H845 621 aa16.02■□□□□ 0.16
SLFN11-206ENST00000498396 CCDC69A6NI79 296 aa16.01■□□□□ 0.15
SLFN11-206ENST00000498396 DHX16O60231 1041 aaKnown RBP16.01■□□□□ 0.15
SLFN11-206ENST00000498396 DDAH1O94760 285 aa16.01■□□□□ 0.15
SLFN11-206ENST00000498396 LIFRP42702 1097 aa16.01■□□□□ 0.15
SLFN11-206ENST00000498396 C8orf34Q49A92 452 aa16.01■□□□□ 0.15
SLFN11-206ENST00000498396 ANKRD35Q8N283 1001 aa16.01■□□□□ 0.15
SLFN11-206ENST00000498396 PIBF1Q8WXW3 757 aa16.01■□□□□ 0.15
SLFN11-206ENST00000498396 DEFB118Q96PH6 123 aa16.01■□□□□ 0.15
SLFN11-206ENST00000498396 PIGSQ96S52 555 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms