RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 CHST13Q8NET6 341 aa21.49■■□□□ 1.03
COPS6-210ENST00000496358 DDX11Q96FC9 970 aa21.49■■□□□ 1.03
COPS6-210ENST00000496358 AGBL1Q96MI9 1066 aa21.49■■□□□ 1.03
COPS6-210ENST00000496358 HOMER2Q9NSB8 354 aa21.49■■□□□ 1.03
COPS6-210ENST00000496358 FBXO40Q9UH90 709 aa21.49■■□□□ 1.03
COPS6-210ENST00000496358 ZNF536O15090 1300 aa21.49■■□□□ 1.03
COPS6-210ENST00000496358 TFRCP02786 760 aaKnown RBP21.48■■□□□ 1.03
COPS6-210ENST00000496358 GOLGA8HP0CJ92 632 aa21.48■■□□□ 1.03
COPS6-210ENST00000496358 SART3Q15020 963 aaKnown RBP21.48■■□□□ 1.03
COPS6-210ENST00000496358 NECTIN1Q15223 517 aa21.48■■□□□ 1.03
COPS6-210ENST00000496358 SEC23AQ15436 765 aa21.48■■□□□ 1.03
COPS6-210ENST00000496358 OLFML2BQ68BL8 750 aa21.48■■□□□ 1.03
COPS6-210ENST00000496358 CHST3Q7LGC8 479 aa21.48■■□□□ 1.03
COPS6-210ENST00000496358 SHISA4Q96DD7 197 aa21.48■■□□□ 1.03
COPS6-210ENST00000496358 SMCHD1A6NHR9 2005 aa21.48■■□□□ 1.03
COPS6-210ENST00000496358 BRCA2P51587 3418 aa21.48■■□□□ 1.03
COPS6-210ENST00000496358 ALAS1P13196 640 aa21.47■■□□□ 1.03
COPS6-210ENST00000496358 CYP2C19P33261 490 aa21.47■■□□□ 1.03
COPS6-210ENST00000496358 TKFCQ3LXA3 575 aa21.47■■□□□ 1.03
COPS6-210ENST00000496358 RNF20Q5VTR2 975 aa21.47■■□□□ 1.03
COPS6-210ENST00000496358 ANKRD35Q8N283 1001 aa21.47■■□□□ 1.03
COPS6-210ENST00000496358 MAML3Q96JK9 1138 aa21.47■■□□□ 1.03
COPS6-210ENST00000496358 RANBP17Q9H2T7 1088 aaKnown RBP21.47■■□□□ 1.03
COPS6-210ENST00000496358 CAPN2P17655 700 aa21.46■■□□□ 1.03
COPS6-210ENST00000496358 CCND3P30281 292 aaPredicted RBP21.46■■□□□ 1.03
COPS6-210ENST00000496358 WTAPQ15007 396 aa21.46■■□□□ 1.03
COPS6-210ENST00000496358 MB21D2Q8IYB1 491 aaPredicted RBP21.46■■□□□ 1.03
COPS6-210ENST00000496358 TRERF1Q96PN7 1200 aa21.46■■□□□ 1.03
COPS6-210ENST00000496358 UBA5Q9GZZ9 404 aa21.46■■□□□ 1.03
COPS6-210ENST00000496358 ACAD9Q9H845 621 aa21.46■■□□□ 1.03
COPS6-210ENST00000496358 RNF146Q9NTX7 359 aa21.46■■□□□ 1.03
COPS6-210ENST00000496358 CCPG1Q9ULG6 757 aa21.46■■□□□ 1.03
COPS6-210ENST00000496358 DIS3Q9Y2L1 958 aaKnown RBP21.46■■□□□ 1.03
COPS6-210ENST00000496358 MYH6P13533 1939 aa21.45■■□□□ 1.02
COPS6-210ENST00000496358 ICAM1P05362 532 aa21.45■■□□□ 1.02
COPS6-210ENST00000496358 PARP1P09874 1014 aaKnown RBP21.45■■□□□ 1.02
COPS6-210ENST00000496358 ZNF792Q3KQV3 632 aa21.45■■□□□ 1.02
COPS6-210ENST00000496358 ASPRV1Q53RT3 343 aa21.45■■□□□ 1.02
COPS6-210ENST00000496358 TMEM67Q5HYA8 995 aa21.45■■□□□ 1.02
COPS6-210ENST00000496358 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.45■■□□□ 1.02
COPS6-210ENST00000496358 IGHA2P01877 340 aa21.44■■□□□ 1.02
COPS6-210ENST00000496358 CNGA1P29973 690 aa21.44■■□□□ 1.02
COPS6-210ENST00000496358 ANTXR2P58335 489 aa21.44■■□□□ 1.02
COPS6-210ENST00000496358 CRISPLD2Q9H0B8 497 aa21.44■■□□□ 1.02
COPS6-210ENST00000496358 CPVLQ9H3G5 476 aa21.44■■□□□ 1.02
COPS6-210ENST00000496358 MCM5P33992 734 aa21.43■■□□□ 1.02
COPS6-210ENST00000496358 PNMA2Q9UL42 364 aa21.43■■□□□ 1.02
COPS6-210ENST00000496358 DNAJC25-GNG10A0A024R161 153 aa21.42■■□□□ 1.02
COPS6-210ENST00000496358 PRC1O43663 620 aa21.42■■□□□ 1.02
COPS6-210ENST00000496358 DHX16O60231 1041 aaKnown RBP21.42■■□□□ 1.02
COPS6-210ENST00000496358 IGDCC4Q8TDY8 1250 aa21.42■■□□□ 1.02
COPS6-210ENST00000496358 TINF2Q9BSI4 451 aa21.42■■□□□ 1.02
COPS6-210ENST00000496358 SENP2Q9HC62 589 aa21.42■■□□□ 1.02
COPS6-210ENST00000496358 FRMPD3Q5JV73 1810 aa21.41■■□□□ 1.02
COPS6-210ENST00000496358 FARP2O94887 1054 aaPredicted RBP21.41■■□□□ 1.02
COPS6-210ENST00000496358 CYBAP13498 195 aa21.41■■□□□ 1.02
COPS6-210ENST00000496358 TAL1P17542 331 aaPredicted RBP21.41■■□□□ 1.02
COPS6-210ENST00000496358 MUM1L1Q5H9M0 696 aa21.41■■□□□ 1.02
COPS6-210ENST00000496358 CATIPQ7Z7H3 387 aa21.41■■□□□ 1.02
COPS6-210ENST00000496358 ADGRF4Q8IZF3 695 aa21.41■■□□□ 1.02
COPS6-210ENST00000496358 TRPV1Q8NER1 839 aa21.41■■□□□ 1.02
COPS6-210ENST00000496358 MTA3Q9BTC8 594 aa21.41■■□□□ 1.02
COPS6-210ENST00000496358 VAT1LQ9HCJ6 419 aa21.41■■□□□ 1.02
COPS6-210ENST00000496358 A1CFQ9NQ94 594 aaKnown RBP21.41■■□□□ 1.02
COPS6-210ENST00000496358 PFASO15067 1338 aa21.4■■□□□ 1.02
COPS6-210ENST00000496358 MCM3APO60318 1980 aa21.4■■□□□ 1.02
COPS6-210ENST00000496358 POTEB2H3BUK9 544 aa21.4■■□□□ 1.02
COPS6-210ENST00000496358 PRAMEF19Q5SWL8 479 aa21.4■■□□□ 1.02
COPS6-210ENST00000496358 NSMFQ6X4W1 530 aa21.4■■□□□ 1.02
COPS6-210ENST00000496358 STAG2Q8N3U4 1231 aa21.4■■□□□ 1.02
COPS6-210ENST00000496358 TMEM87BQ96K49 555 aa21.4■■□□□ 1.02
COPS6-210ENST00000496358 MAD2L2Q9UI95 211 aa21.4■■□□□ 1.02
COPS6-210ENST00000496358 OGDHLQ9ULD0 1010 aa21.4■■□□□ 1.02
COPS6-210ENST00000496358 WDR19Q8NEZ3 1342 aa21.39■■□□□ 1.01
COPS6-210ENST00000496358 KLRF2D3W0D1 207 aa21.39■■□□□ 1.01
COPS6-210ENST00000496358 MSCO60682 206 aa21.39■■□□□ 1.01
COPS6-210ENST00000496358 REC8O95072 547 aa21.39■■□□□ 1.01
COPS6-210ENST00000496358 CNTN2Q02246 1040 aa21.39■■□□□ 1.01
COPS6-210ENST00000496358 GRM4Q14833 912 aa21.39■■□□□ 1.01
COPS6-210ENST00000496358 CDC37Q16543 378 aaPredicted RBP21.39■■□□□ 1.01
COPS6-210ENST00000496358 LHX8Q68G74 356 aa21.39■■□□□ 1.01
COPS6-210ENST00000496358 TMTC2Q8N394 836 aa21.39■■□□□ 1.01
COPS6-210ENST00000496358 MSL3Q8N5Y2 521 aaKnown RBP21.39■■□□□ 1.01
COPS6-210ENST00000496358 ANKLE1Q8NAG6 615 aa21.39■■□□□ 1.01
COPS6-210ENST00000496358 NEK1Q96PY6 1258 aa21.39■■□□□ 1.01
COPS6-210ENST00000496358 LY9Q9HBG7 655 aa21.39■■□□□ 1.01
COPS6-210ENST00000496358 DDX20Q9UHI6 824 aaKnown RBP21.39■■□□□ 1.01
COPS6-210ENST00000496358 PALM3A6NDB9 673 aaPredicted RBP21.38■■□□□ 1.01
COPS6-210ENST00000496358 KRT32Q14532 448 aa21.38■■□□□ 1.01
COPS6-210ENST00000496358 TSGA10IPQ3SY00 556 aa21.38■■□□□ 1.01
COPS6-210ENST00000496358 USH1GQ495M9 461 aa21.38■■□□□ 1.01
COPS6-210ENST00000496358 NFXL1Q6ZNB6 911 aa21.38■■□□□ 1.01
COPS6-210ENST00000496358 ZNF467Q7Z7K2 595 aaPredicted RBP21.38■■□□□ 1.01
COPS6-210ENST00000496358 RASEFQ8IZ41 740 aa21.38■■□□□ 1.01
COPS6-210ENST00000496358 JMJD4Q9H9V9 463 aa21.38■■□□□ 1.01
COPS6-210ENST00000496358 GPHNQ9NQX3 736 aaPredicted RBP21.38■■□□□ 1.01
COPS6-210ENST00000496358 CYP39A1Q9NYL5 469 aa21.38■■□□□ 1.01
COPS6-210ENST00000496358 NRBP1Q9UHY1 535 aa21.38■■□□□ 1.01
COPS6-210ENST00000496358 CNPY2Q9Y2B0 182 aa21.38■■□□□ 1.01
COPS6-210ENST00000496358 SYNGAP1Q96PV0 1343 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms