RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 TRERF1Q96PN7 1200 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 TMX4Q9H1E5 349 aaPredicted RBP10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 TMEM260Q9NX78 707 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 A0A1B0GTH6 734 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 DDAH1O94760 285 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 TAL1P17542 331 aaPredicted RBP10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 ADRA2BP18089 450 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 ERCC3P19447 782 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 HNRNPH2P55795 449 aaKnown RBP10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 FAM193AP78312 1265 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 RBL2Q08999 1139 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 SMC1AQ14683 1233 aaKnown RBP10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 PFKFB3Q16875 520 aaPredicted RBP10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 SBK1Q52WX2 424 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 TTBK2Q6IQ55 1244 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 BLIDQ8IZY5 108 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 IGSF22Q8N9C0 903 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 TRIML1Q8N9V2 468 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 TMEM60Q9H2L4 133 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 CALCOCO1Q9P1Z2 691 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 PPP1R1BQ9UD71 204 aaPredicted RBP10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 FGRP09769 529 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 KANK3Q6NY19 840 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 RAD9BQ6WBX8 426 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 KCTD1Q719H9 257 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 PPFIBP1Q86W92 1011 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 RABGGTAQ92696 567 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 GOLGA1Q92805 767 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 PUF60Q9UHX1 559 aaKnown RBP10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 ECM29Q5VYK3 1845 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 CACNA1SQ13698 1873 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 GPR75-ASB3A0A0A6YYF3 556 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 PES1O00541 588 aaKnown RBP10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 CD44P16070 742 aaKnown RBP10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 ERCC5P28715 1186 aaPredicted RBP10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 C2CD5Q86YS7 1000 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 GPIHBP1Q8IV16 184 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 ZNF579Q8NAF0 562 aaKnown RBP10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 CEP131Q9UPN4 1083 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 ATP8B1O43520 1251 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 GYS2P54840 703 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 SLC27A3Q5K4L6 730 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 NLGN1Q8N2Q7 840 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 SPATA20Q8TB22 786 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 ADGRG1Q9Y653 693 aa10.25□□□□□ -0.77
TM9SF4-207ENST00000495749 PARP1P09874 1014 aaKnown RBP10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 IL1R1P14778 569 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 RXRBP28702 533 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 TXLNAP40222 546 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 CHMP4BP1P59074 171 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 MAPK8IP2Q13387 824 aaPredicted RBP10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 CCDC96Q2M329 555 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 APTXQ7Z2E3 356 aaKnown RBP10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 DGKHQ86XP1 1220 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 PANX2Q96RD6 677 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 FUT8Q9BYC5 575 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 ATP6V0A2Q9Y487 856 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 SYNRGQ9UMZ2 1314 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 SMCO2A6NFE2 343 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 TFRCP02786 760 aaKnown RBP10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 CASP14P31944 242 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 CUL4BQ13620 913 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 AOC3Q16853 763 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 LONRF2Q1L5Z9 754 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 SPATA1Q5VX52 437 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 PAGE5Q96GU1 130 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 UBXN6Q9BZV1 441 aa10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 TNRC6CQ9HCJ0 1690 aaKnown RBP10.24□□□□□ -0.77
TM9SF4-207ENST00000495749 KIF5CO60282 957 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 CCNT1O60563 726 aaKnown RBP10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 GDF11O95390 407 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 PPP4CP60510 307 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 EZH2Q15910 746 aaKnown RBP10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 ZNF569Q5MCW4 686 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 SP8Q8IXZ3 490 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 C21orf2O43822 256 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 CCT6AP40227 531 aaKnown RBP10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 KIF4BQ2VIQ3 1234 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 CDC42EP5Q6NZY7 148 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 BBXQ8WY36 941 aaPredicted RBP10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 ADD3Q9UEY8 706 aaKnown RBP10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 TECP42680 631 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 IRX5P78411 483 aaPredicted RBP10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 MCM6Q14566 821 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 UBE2SQ16763 222 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 RRAGBQ5VZM2 374 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 SRGAP1Q7Z6B7 1085 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 TNFRSF25Q93038 417 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 HPS3Q969F9 1004 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 CRAMP1Q96RY5 1269 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 NUP88Q99567 741 aaPredicted RBP10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 PCDHA6Q9UN73 950 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 GDAQ9Y2T3 454 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 PCDHA8Q9Y5H6 950 aa10.23□□□□□ -0.77
TM9SF4-207ENST00000495749 CCDC151A5D8V7 595 aa10.22□□□□□ -0.77
TM9SF4-207ENST00000495749 MFAP3LO75121 409 aa10.22□□□□□ -0.77
TM9SF4-207ENST00000495749 ABL1P00519 1130 aa10.22□□□□□ -0.77
TM9SF4-207ENST00000495749 HOXA10P31260 410 aaPredicted RBP10.22□□□□□ -0.77
TM9SF4-207ENST00000495749 TXKP42681 527 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms