RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 CCND3P30281 292 aaPredicted RBP16.84■□□□□ 0.29
SCAP-213ENST00000494938 KCTD2Q14681 263 aa16.84■□□□□ 0.29
SCAP-213ENST00000494938 GPATCH4Q5T3I0 446 aaKnown RBP16.84■□□□□ 0.29
SCAP-213ENST00000494938 IFIT1BQ5T764 474 aaKnown RBP16.84■□□□□ 0.29
SCAP-213ENST00000494938 MFSD14CQ5VZR4 134 aa16.84■□□□□ 0.29
SCAP-213ENST00000494938 CCDC174Q6PII3 467 aa16.84■□□□□ 0.29
SCAP-213ENST00000494938 CASC1Q6TDU7 716 aa16.84■□□□□ 0.29
SCAP-213ENST00000494938 UBE2Q1Q7Z7E8 422 aa16.84■□□□□ 0.29
SCAP-213ENST00000494938 TRPV1Q8NER1 839 aa16.84■□□□□ 0.29
SCAP-213ENST00000494938 MAML3Q96JK9 1138 aa16.84■□□□□ 0.29
SCAP-213ENST00000494938 UBA5Q9GZZ9 404 aa16.84■□□□□ 0.29
SCAP-213ENST00000494938 SLC5A4Q9NY91 659 aa16.84■□□□□ 0.29
SCAP-213ENST00000494938 DIS3Q9Y2L1 958 aaKnown RBP16.84■□□□□ 0.29
SCAP-213ENST00000494938 IFIT3O14879 490 aaKnown RBP16.83■□□□□ 0.28
SCAP-213ENST00000494938 TFRCP02786 760 aaKnown RBP16.83■□□□□ 0.28
SCAP-213ENST00000494938 LHX8Q68G74 356 aa16.83■□□□□ 0.28
SCAP-213ENST00000494938 RALYLQ86SE5 291 aaKnown RBP16.83■□□□□ 0.28
SCAP-213ENST00000494938 TRERF1Q96PN7 1200 aa16.83■□□□□ 0.28
SCAP-213ENST00000494938 CPVLQ9H3G5 476 aa16.83■□□□□ 0.28
SCAP-213ENST00000494938 FBXO40Q9UH90 709 aa16.83■□□□□ 0.28
SCAP-213ENST00000494938 KIAA0100Q14667 2235 aaKnown RBP16.82■□□□□ 0.28
SCAP-213ENST00000494938 ICAM1P05362 532 aa16.82■□□□□ 0.28
SCAP-213ENST00000494938 TAL1P17542 331 aaPredicted RBP16.82■□□□□ 0.28
SCAP-213ENST00000494938 TKFCQ3LXA3 575 aa16.82■□□□□ 0.28
SCAP-213ENST00000494938 MUM1L1Q5H9M0 696 aa16.82■□□□□ 0.28
SCAP-213ENST00000494938 PRAMEF19Q5SWL8 479 aa16.82■□□□□ 0.28
SCAP-213ENST00000494938 RASEFQ8IZ41 740 aa16.82■□□□□ 0.28
SCAP-213ENST00000494938 GPHNQ9NQX3 736 aaPredicted RBP16.82■□□□□ 0.28
SCAP-213ENST00000494938 HOMER2Q9NSB8 354 aa16.82■□□□□ 0.28
SCAP-213ENST00000494938 ALAS1P13196 640 aa16.81■□□□□ 0.28
SCAP-213ENST00000494938 CAPN2P17655 700 aa16.81■□□□□ 0.28
SCAP-213ENST00000494938 TSGA10IPQ3SY00 556 aa16.81■□□□□ 0.28
SCAP-213ENST00000494938 ASPRV1Q53RT3 343 aa16.81■□□□□ 0.28
SCAP-213ENST00000494938 TMEM67Q5HYA8 995 aa16.81■□□□□ 0.28
SCAP-213ENST00000494938 ANKRD35Q8N283 1001 aa16.81■□□□□ 0.28
SCAP-213ENST00000494938 STAG2Q8N3U4 1231 aa16.81■□□□□ 0.28
SCAP-213ENST00000494938 DDX11Q96FC9 970 aa16.81■□□□□ 0.28
SCAP-213ENST00000494938 FGD4Q96M96 766 aa16.81■□□□□ 0.28
SCAP-213ENST00000494938 RNF146Q9NTX7 359 aa16.81■□□□□ 0.28
SCAP-213ENST00000494938 CCPG1Q9ULG6 757 aa16.81■□□□□ 0.28
SCAP-213ENST00000494938 MYH4Q9Y623 1939 aa16.8■□□□□ 0.28
SCAP-213ENST00000494938 PALM3A6NDB9 673 aaPredicted RBP16.8■□□□□ 0.28
SCAP-213ENST00000494938 PRC1O43663 620 aa16.8■□□□□ 0.28
SCAP-213ENST00000494938 PARP1P09874 1014 aaKnown RBP16.8■□□□□ 0.28
SCAP-213ENST00000494938 CYBAP13498 195 aa16.8■□□□□ 0.28
SCAP-213ENST00000494938 MNX1P50219 401 aaPredicted RBP16.8■□□□□ 0.28
SCAP-213ENST00000494938 TROAPQ12815 778 aa16.8■□□□□ 0.28
SCAP-213ENST00000494938 WTAPQ15007 396 aa16.8■□□□□ 0.28
SCAP-213ENST00000494938 ADGRF4Q8IZF3 695 aa16.8■□□□□ 0.28
SCAP-213ENST00000494938 KCNB2Q92953 911 aa16.8■□□□□ 0.28
SCAP-213ENST00000494938 TINF2Q9BSI4 451 aa16.8■□□□□ 0.28
SCAP-213ENST00000494938 ACAD9Q9H845 621 aa16.8■□□□□ 0.28
SCAP-213ENST00000494938 LY9Q9HBG7 655 aa16.8■□□□□ 0.28
SCAP-213ENST00000494938 A1CFQ9NQ94 594 aaKnown RBP16.8■□□□□ 0.28
SCAP-213ENST00000494938 MAD2L2Q9UI95 211 aa16.8■□□□□ 0.28
SCAP-213ENST00000494938 OGDHLQ9ULD0 1010 aa16.8■□□□□ 0.28
SCAP-213ENST00000494938 MCM5P33992 734 aa16.79■□□□□ 0.28
SCAP-213ENST00000494938 CNTN2Q02246 1040 aa16.79■□□□□ 0.28
SCAP-213ENST00000494938 SART3Q15020 963 aaKnown RBP16.79■□□□□ 0.28
SCAP-213ENST00000494938 SLC35G1Q2M3R5 365 aa16.79■□□□□ 0.28
SCAP-213ENST00000494938 FAM133AQ8N9E0 248 aa16.79■□□□□ 0.28
SCAP-213ENST00000494938 CLEC4DQ8WXI8 215 aa16.79■□□□□ 0.28
SCAP-213ENST00000494938 MTA3Q9BTC8 594 aa16.79■□□□□ 0.28
SCAP-213ENST00000494938 JMJD4Q9H9V9 463 aa16.79■□□□□ 0.28
SCAP-213ENST00000494938 LAMA4Q16363 1823 aa16.79■□□□□ 0.28
SCAP-213ENST00000494938 PARP14Q460N5 1801 aa16.79■□□□□ 0.28
SCAP-213ENST00000494938 ERICH2A1L162 156 aa16.78■□□□□ 0.28
SCAP-213ENST00000494938 SOWAHBA6NEL2 793 aa16.78■□□□□ 0.28
SCAP-213ENST00000494938 SNAI1O95863 264 aaPredicted RBP16.78■□□□□ 0.28
SCAP-213ENST00000494938 EXOSC10Q01780 885 aaKnown RBP16.78■□□□□ 0.28
SCAP-213ENST00000494938 GRM4Q14833 912 aa16.78■□□□□ 0.28
SCAP-213ENST00000494938 ADCK5Q3MIX3 580 aa16.78■□□□□ 0.28
SCAP-213ENST00000494938 RNF20Q5VTR2 975 aa16.78■□□□□ 0.28
SCAP-213ENST00000494938 MAMDC4Q6UXC1 1216 aa16.78■□□□□ 0.28
SCAP-213ENST00000494938 ZNF467Q7Z7K2 595 aaPredicted RBP16.78■□□□□ 0.28
SCAP-213ENST00000494938 VAT1LQ9HCJ6 419 aa16.78■□□□□ 0.28
SCAP-213ENST00000494938 CYP39A1Q9NYL5 469 aa16.78■□□□□ 0.28
SCAP-213ENST00000494938 KLRF2D3W0D1 207 aa16.77■□□□□ 0.28
SCAP-213ENST00000494938 POTEB2H3BUK9 544 aa16.77■□□□□ 0.28
SCAP-213ENST00000494938 SH2B2O14492 632 aaPredicted RBP16.77■□□□□ 0.28
SCAP-213ENST00000494938 ZNF865P0CJ78 1059 aaPredicted RBP16.77■□□□□ 0.28
SCAP-213ENST00000494938 CNGA1P29973 690 aa16.77■□□□□ 0.28
SCAP-213ENST00000494938 MSL3Q8N5Y2 521 aaKnown RBP16.77■□□□□ 0.28
SCAP-213ENST00000494938 MTMR8Q96EF0 704 aa16.77■□□□□ 0.28
SCAP-213ENST00000494938 NEK1Q96PY6 1258 aa16.77■□□□□ 0.28
SCAP-213ENST00000494938 DDX20Q9UHI6 824 aaKnown RBP16.77■□□□□ 0.28
SCAP-213ENST00000494938 NRBP1Q9UHY1 535 aa16.77■□□□□ 0.28
SCAP-213ENST00000494938 WDR19Q8NEZ3 1342 aa16.76■□□□□ 0.27
SCAP-213ENST00000494938 NFIBO00712 420 aa16.76■□□□□ 0.27
SCAP-213ENST00000494938 FARP2O94887 1054 aaPredicted RBP16.76■□□□□ 0.27
SCAP-213ENST00000494938 HSPA4P34932 840 aa16.76■□□□□ 0.27
SCAP-213ENST00000494938 BAATQ14032 418 aaPredicted RBP16.76■□□□□ 0.27
SCAP-213ENST00000494938 CATIPQ7Z7H3 387 aa16.76■□□□□ 0.27
SCAP-213ENST00000494938 TMTC2Q8N394 836 aa16.76■□□□□ 0.27
SCAP-213ENST00000494938 ANKLE1Q8NAG6 615 aa16.76■□□□□ 0.27
SCAP-213ENST00000494938 DIS3LQ8TF46 1054 aaKnown RBP16.76■□□□□ 0.27
SCAP-213ENST00000494938 TMEM87BQ96K49 555 aa16.76■□□□□ 0.27
SCAP-213ENST00000494938 PURBQ96QR8 312 aaKnown RBP16.76■□□□□ 0.27
SCAP-213ENST00000494938 LRRC2Q9BYS8 371 aa16.76■□□□□ 0.27
SCAP-213ENST00000494938 PNMA2Q9UL42 364 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms