RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 PARP1P09874 1014 aaKnown RBP23.15■■□□□ 1.3
LIMK1-206ENST00000486361 CYP2C19P33261 490 aa23.15■■□□□ 1.3
LIMK1-206ENST00000486361 SART3Q15020 963 aaKnown RBP23.15■■□□□ 1.3
LIMK1-206ENST00000486361 GPATCH4Q5T3I0 446 aaKnown RBP23.15■■□□□ 1.3
LIMK1-206ENST00000486361 DEFB118Q96PH6 123 aa23.15■■□□□ 1.3
LIMK1-206ENST00000486361 TRERF1Q96PN7 1200 aa23.15■■□□□ 1.3
LIMK1-206ENST00000486361 LRRC2Q9BYS8 371 aa23.15■■□□□ 1.3
LIMK1-206ENST00000486361 CCPG1Q9ULG6 757 aa23.15■■□□□ 1.3
LIMK1-206ENST00000486361 KIAA0100Q14667 2235 aaKnown RBP23.14■■□□□ 1.3
LIMK1-206ENST00000486361 RPTORQ8N122 1335 aa23.14■■□□□ 1.3
LIMK1-206ENST00000486361 GJB1P08034 283 aa23.14■■□□□ 1.29
LIMK1-206ENST00000486361 MCM5P33992 734 aa23.14■■□□□ 1.29
LIMK1-206ENST00000486361 ADCK5Q3MIX3 580 aa23.14■■□□□ 1.29
LIMK1-206ENST00000486361 CHST13Q8NET6 341 aa23.14■■□□□ 1.29
LIMK1-206ENST00000486361 DDX11Q96FC9 970 aa23.14■■□□□ 1.29
LIMK1-206ENST00000486361 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.14■■□□□ 1.29
LIMK1-206ENST00000486361 VAT1LQ9HCJ6 419 aa23.14■■□□□ 1.29
LIMK1-206ENST00000486361 HMX1Q9NP08 348 aaPredicted RBP23.14■■□□□ 1.29
LIMK1-206ENST00000486361 RNF146Q9NTX7 359 aa23.14■■□□□ 1.29
LIMK1-206ENST00000486361 ICAM1P05362 532 aa23.13■■□□□ 1.29
LIMK1-206ENST00000486361 CCND3P30281 292 aaPredicted RBP23.13■■□□□ 1.29
LIMK1-206ENST00000486361 ZNF792Q3KQV3 632 aa23.13■■□□□ 1.29
LIMK1-206ENST00000486361 ASPRV1Q53RT3 343 aa23.13■■□□□ 1.29
LIMK1-206ENST00000486361 MUM1L1Q5H9M0 696 aa23.13■■□□□ 1.29
LIMK1-206ENST00000486361 MAP3K21Q5TCX8 1036 aa23.13■■□□□ 1.29
LIMK1-206ENST00000486361 MFSD14CQ5VZR4 134 aa23.13■■□□□ 1.29
LIMK1-206ENST00000486361 ANKRD35Q8N283 1001 aa23.13■■□□□ 1.29
LIMK1-206ENST00000486361 U2AF1L4Q8WU68 220 aaKnown RBP23.13■■□□□ 1.29
LIMK1-206ENST00000486361 MAML3Q96JK9 1138 aa23.13■■□□□ 1.29
LIMK1-206ENST00000486361 NEK1Q96PY6 1258 aa23.13■■□□□ 1.29
LIMK1-206ENST00000486361 LY9Q9HBG7 655 aa23.13■■□□□ 1.29
LIMK1-206ENST00000486361 SLC5A4Q9NY91 659 aa23.13■■□□□ 1.29
LIMK1-206ENST00000486361 MLLT1Q03111 559 aaPredicted RBP23.12■■□□□ 1.29
LIMK1-206ENST00000486361 PRAMEF19Q5SWL8 479 aa23.12■■□□□ 1.29
LIMK1-206ENST00000486361 ADGRF4Q8IZF3 695 aa23.12■■□□□ 1.29
LIMK1-206ENST00000486361 SHISA4Q96DD7 197 aa23.12■■□□□ 1.29
LIMK1-206ENST00000486361 TCEANC2Q96MN5 208 aa23.12■■□□□ 1.29
LIMK1-206ENST00000486361 ACAD9Q9H845 621 aa23.12■■□□□ 1.29
LIMK1-206ENST00000486361 PAK6Q9NQU5 681 aaPredicted RBP23.12■■□□□ 1.29
LIMK1-206ENST00000486361 FBXO40Q9UH90 709 aa23.12■■□□□ 1.29
LIMK1-206ENST00000486361 MAD2L2Q9UI95 211 aa23.12■■□□□ 1.29
LIMK1-206ENST00000486361 ZNFX1Q9P2E3 1918 aaKnown RBP23.12■■□□□ 1.29
LIMK1-206ENST00000486361 SH2B2O14492 632 aaPredicted RBP23.11■■□□□ 1.29
LIMK1-206ENST00000486361 DHX16O60231 1041 aaKnown RBP23.11■■□□□ 1.29
LIMK1-206ENST00000486361 REC8O95072 547 aa23.11■■□□□ 1.29
LIMK1-206ENST00000486361 SGPL1O95470 568 aa23.11■■□□□ 1.29
LIMK1-206ENST00000486361 IGHA2P01877 340 aa23.11■■□□□ 1.29
LIMK1-206ENST00000486361 GJA8P48165 433 aa23.11■■□□□ 1.29
LIMK1-206ENST00000486361 TSGA10IPQ3SY00 556 aa23.11■■□□□ 1.29
LIMK1-206ENST00000486361 NUP133Q8WUM0 1156 aa23.11■■□□□ 1.29
LIMK1-206ENST00000486361 MYL10Q9BUA6 226 aa23.11■■□□□ 1.29
LIMK1-206ENST00000486361 PALM3A6NDB9 673 aaPredicted RBP23.1■■□□□ 1.29
LIMK1-206ENST00000486361 KLRF2D3W0D1 207 aa23.1■■□□□ 1.29
LIMK1-206ENST00000486361 TFRCP02786 760 aaKnown RBP23.1■■□□□ 1.29
LIMK1-206ENST00000486361 HSPA4P34932 840 aa23.1■■□□□ 1.29
LIMK1-206ENST00000486361 TROAPQ12815 778 aa23.1■■□□□ 1.29
LIMK1-206ENST00000486361 GRM4Q14833 912 aa23.1■■□□□ 1.29
LIMK1-206ENST00000486361 TKFCQ3LXA3 575 aa23.1■■□□□ 1.29
LIMK1-206ENST00000486361 OLFML2BQ68BL8 750 aa23.1■■□□□ 1.29
LIMK1-206ENST00000486361 NFXL1Q6ZNB6 911 aa23.1■■□□□ 1.29
LIMK1-206ENST00000486361 CATIPQ7Z7H3 387 aa23.1■■□□□ 1.29
LIMK1-206ENST00000486361 TRPV1Q8NER1 839 aa23.1■■□□□ 1.29
LIMK1-206ENST00000486361 JMJD4Q9H9V9 463 aa23.1■■□□□ 1.29
LIMK1-206ENST00000486361 DNAJC25-GNG10A0A024R161 153 aa23.09■■□□□ 1.29
LIMK1-206ENST00000486361 CPA1P15085 419 aa23.09■■□□□ 1.29
LIMK1-206ENST00000486361 CNGA1P29973 690 aa23.09■■□□□ 1.29
LIMK1-206ENST00000486361 CDC37Q16543 378 aaPredicted RBP23.09■■□□□ 1.29
LIMK1-206ENST00000486361 RAB11FIP4Q86YS3 637 aa23.09■■□□□ 1.29
LIMK1-206ENST00000486361 KCNB2Q92953 911 aa23.09■■□□□ 1.29
LIMK1-206ENST00000486361 TMEM87BQ96K49 555 aa23.09■■□□□ 1.29
LIMK1-206ENST00000486361 A1CFQ9NQ94 594 aaKnown RBP23.09■■□□□ 1.29
LIMK1-206ENST00000486361 SNX14Q9Y5W7 946 aa23.09■■□□□ 1.29
LIMK1-206ENST00000486361 ZNF236Q9UL36 1845 aa23.09■■□□□ 1.29
LIMK1-206ENST00000486361 SMCHD1A6NHR9 2005 aa23.08■■□□□ 1.29
LIMK1-206ENST00000486361 EXOSC10Q01780 885 aaKnown RBP23.08■■□□□ 1.29
LIMK1-206ENST00000486361 CNTN2Q02246 1040 aa23.08■■□□□ 1.29
LIMK1-206ENST00000486361 SLC35G1Q2M3R5 365 aa23.08■■□□□ 1.29
LIMK1-206ENST00000486361 USH1GQ495M9 461 aa23.08■■□□□ 1.29
LIMK1-206ENST00000486361 NSMFQ6X4W1 530 aa23.08■■□□□ 1.29
LIMK1-206ENST00000486361 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.08■■□□□ 1.29
LIMK1-206ENST00000486361 ZNF654Q8IZM8 581 aa23.08■■□□□ 1.29
LIMK1-206ENST00000486361 DIS3Q9Y2L1 958 aaKnown RBP23.08■■□□□ 1.29
LIMK1-206ENST00000486361 CCDC69A6NI79 296 aa23.07■■□□□ 1.28
LIMK1-206ENST00000486361 NFIBO00712 420 aa23.07■■□□□ 1.28
LIMK1-206ENST00000486361 RXRAP19793 462 aa23.07■■□□□ 1.28
LIMK1-206ENST00000486361 KRT32Q14532 448 aa23.07■■□□□ 1.28
LIMK1-206ENST00000486361 QRICH1Q2TAL8 776 aa23.07■■□□□ 1.28
LIMK1-206ENST00000486361 DHX32Q7L7V1 743 aaKnown RBP23.07■■□□□ 1.28
LIMK1-206ENST00000486361 JAKMIP1Q96N16 626 aaKnown RBP23.07■■□□□ 1.28
LIMK1-206ENST00000486361 PURBQ96QR8 312 aaKnown RBP23.07■■□□□ 1.28
LIMK1-206ENST00000486361 TINF2Q9BSI4 451 aa23.07■■□□□ 1.28
LIMK1-206ENST00000486361 MTA3Q9BTC8 594 aa23.07■■□□□ 1.28
LIMK1-206ENST00000486361 USP26Q9BXU7 913 aa23.07■■□□□ 1.28
LIMK1-206ENST00000486361 POTEB2H3BUK9 544 aa23.06■■□□□ 1.28
LIMK1-206ENST00000486361 CYBAP13498 195 aa23.06■■□□□ 1.28
LIMK1-206ENST00000486361 CCDC144CPQ8IYA2 1237 aa23.06■■□□□ 1.28
LIMK1-206ENST00000486361 CLEC4DQ8WXI8 215 aa23.06■■□□□ 1.28
LIMK1-206ENST00000486361 FGD4Q96M96 766 aa23.06■■□□□ 1.28
LIMK1-206ENST00000486361 RBBP6Q7Z6E9 1792 aaKnown RBP23.06■■□□□ 1.28
LIMK1-206ENST00000486361 LIFRP42702 1097 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms