RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 SUV39H2Q9H5I1 410 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 BRMS1Q9HCU9 246 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 POLR3KQ9Y2Y1 108 aaPredicted RBP4.18□□□□□ -1.74
SMC6-208ENST00000481708 TTLL8A6PVC2 850 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 RBAK-RBAKDNI3L0D1 243 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 THBS1P07996 1170 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 RRM1P23921 792 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 HTR3AP46098 478 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 CDK8P49336 464 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 EIF6P56537 245 aaKnown RBP4.18□□□□□ -1.74
SMC6-208ENST00000481708 PTPN11Q06124 597 aaPredicted RBP4.18□□□□□ -1.74
SMC6-208ENST00000481708 STRN3Q13033 797 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 COL9A2Q14055 689 aaPredicted RBP4.18□□□□□ -1.74
SMC6-208ENST00000481708 BRD3Q15059 726 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 CCDC93Q567U6 631 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 IGF2-ASQ6U949 168 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 ADAMTSL4Q6UY14 1074 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 MPRIPQ6WCQ1 1025 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 AGMOQ6ZNB7 445 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 EPM2AIP1Q7L775 607 aaPredicted RBP4.18□□□□□ -1.74
SMC6-208ENST00000481708 LYSMD3Q7Z3D4 306 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 BTLAQ7Z6A9 289 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 SUGP1Q8IWZ8 645 aaKnown RBP4.18□□□□□ -1.74
SMC6-208ENST00000481708 JPH3Q8WXH2 748 aaPredicted RBP4.18□□□□□ -1.74
SMC6-208ENST00000481708 NKD1Q969G9 470 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 HHIPQ96QV1 700 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 SARGQ9BW04 601 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 HCN2Q9UL51 889 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 ZBTB21Q9ULJ3 1066 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 TONSLQ96HA7 1378 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 A0A1W2PP55 124 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 DYTNA2CJ06 578 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 FIGNL2A6NMB9 653 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 GPR39O43194 453 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 DNAJC8O75937 253 aaPredicted RBP4.18□□□□□ -1.74
SMC6-208ENST00000481708 MSX1P28360 303 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 GTF2E1P29083 439 aaPredicted RBP4.18□□□□□ -1.74
SMC6-208ENST00000481708 GSTT1P30711 240 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 DGKGP49619 791 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 GRM3Q14832 879 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 IER5Q5VY09 327 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 TRIM42Q8IWZ5 723 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 ATXN2LQ8WWM7 1075 aaKnown RBP4.18□□□□□ -1.74
SMC6-208ENST00000481708 ARHGEF4Q9NR80 690 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 KANSL3Q9P2N6 904 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 DNMT3LQ9UJW3 386 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 PCDHB10Q9UN67 800 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 NPHP3Q7Z494 1330 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 SENP3-EIF4A1A0A087X0R7 540 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 SLC26A4O43511 780 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 RXRBP28702 533 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 CCNFP41002 786 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 GRIA2P42262 883 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 GRIA4P48058 902 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 FAM209AQ5JX71 171 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 TTC30BQ8N4P2 665 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 PJA1Q8NG27 643 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 ELP3Q9H9T3 547 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 GTF2IRD1Q9UHL9 959 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 ZNF180Q9UJW8 692 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 FAM187AA6NFU0 413 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 RNASEH2AO75792 299 aaKnown RBP4.17□□□□□ -1.74
SMC6-208ENST00000481708 UPP2O95045 317 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 LMNB2Q03252 620 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 TYRO3Q06418 890 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 ITKQ08881 620 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 STAT4Q14765 748 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 SLC10A6Q3KNW5 377 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 WDR44Q5JSH3 913 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 ZFP42Q96MM3 310 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 STRBPQ96SI9 672 aaKnown RBP4.17□□□□□ -1.74
SMC6-208ENST00000481708 SMOC1Q9H4F8 434 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 C9orf78Q9NZ63 289 aaPredicted RBP4.17□□□□□ -1.74
SMC6-208ENST00000481708 SLC45A1Q9Y2W3 748 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 RTCBQ9Y3I0 505 aaKnown RBP4.17□□□□□ -1.74
SMC6-208ENST00000481708 NPC1L1Q9UHC9 1359 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 TMEM238LA0A1B0GVL6 79 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 PLIN1O60240 522 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 HDAC1Q13547 482 aaPredicted RBP4.17□□□□□ -1.74
SMC6-208ENST00000481708 KCTD2Q14681 263 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 ODF1Q14990 250 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 BICDL1Q6ZP65 573 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 GK5Q6ZS86 529 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 ZNF438Q7Z4V0 828 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 CNTD1Q8N815 330 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 KLHL6Q8WZ60 621 aa4.17□□□□□ -1.74
SMC6-208ENST00000481708 ZSCAN20P17040 1043 aaPredicted RBP4.16□□□□□ -1.74
SMC6-208ENST00000481708 TATP17735 454 aaPredicted RBP4.16□□□□□ -1.74
SMC6-208ENST00000481708 ARSJQ5FYB0 599 aaPredicted RBP4.16□□□□□ -1.74
SMC6-208ENST00000481708 RELL1Q8IUW5 271 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 FAM178BQ8IXR5 827 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 ST13P5Q8NFI4 369 aaPredicted RBP4.16□□□□□ -1.74
SMC6-208ENST00000481708 OXCT2Q9BYC2 517 aaPredicted RBP4.16□□□□□ -1.74
SMC6-208ENST00000481708 GPAMQ9HCL2 828 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 TIMMDC1Q9NPL8 285 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 NUP98P52948 1817 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 A0A1B0GTH6 734 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 A0A1W2PNR3 127 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 CAPNS1P04632 268 aa4.16□□□□□ -1.74
SMC6-208ENST00000481708 FGD2Q7Z6J4 655 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms