RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 UBA5Q9GZZ9 404 aa20.74■□□□□ 0.91
PTPN7-209ENST00000477554 GPHNQ9NQX3 736 aaPredicted RBP20.74■□□□□ 0.91
PTPN7-209ENST00000477554 MCM3APO60318 1980 aa20.74■□□□□ 0.91
PTPN7-209ENST00000477554 PLA2G6O60733 806 aa20.73■□□□□ 0.91
PTPN7-209ENST00000477554 BTNL9Q6UXG8 535 aa20.73■□□□□ 0.91
PTPN7-209ENST00000477554 DGKHQ86XP1 1220 aa20.73■□□□□ 0.91
PTPN7-209ENST00000477554 PNMA1Q8ND90 353 aa20.73■□□□□ 0.91
PTPN7-209ENST00000477554 CHURC1Q8WUH1 139 aa20.73■□□□□ 0.91
PTPN7-209ENST00000477554 PAWRQ96IZ0 340 aaKnown RBP20.73■□□□□ 0.91
PTPN7-209ENST00000477554 TTC14Q96N46 770 aa20.73■□□□□ 0.91
PTPN7-209ENST00000477554 U3KPZ7 1027 aaPredicted RBP20.73■□□□□ 0.91
PTPN7-209ENST00000477554 DNAJC25-GNG10A0A024R161 153 aa20.72■□□□□ 0.91
PTPN7-209ENST00000477554 CNTN2Q02246 1040 aa20.72■□□□□ 0.91
PTPN7-209ENST00000477554 KCTD2Q14681 263 aa20.72■□□□□ 0.91
PTPN7-209ENST00000477554 PPP4R3BQ5MIZ7 849 aa20.72■□□□□ 0.91
PTPN7-209ENST00000477554 SYDE2Q5VT97 1194 aa20.72■□□□□ 0.91
PTPN7-209ENST00000477554 MFSD14CQ5VZR4 134 aa20.72■□□□□ 0.91
PTPN7-209ENST00000477554 OLFML2BQ68BL8 750 aa20.72■□□□□ 0.91
PTPN7-209ENST00000477554 TRMT44Q8IYL2 757 aaKnown RBP20.72■□□□□ 0.91
PTPN7-209ENST00000477554 ANKS1AQ92625 1134 aa20.72■□□□□ 0.91
PTPN7-209ENST00000477554 LENG1Q96BZ8 264 aaPredicted RBP20.72■□□□□ 0.91
PTPN7-209ENST00000477554 KRT23Q9C075 422 aa20.72■□□□□ 0.91
PTPN7-209ENST00000477554 RANBP17Q9H2T7 1088 aaKnown RBP20.72■□□□□ 0.91
PTPN7-209ENST00000477554 ASTN1O14525 1302 aa20.72■□□□□ 0.91
PTPN7-209ENST00000477554 ALAS1P13196 640 aa20.71■□□□□ 0.91
PTPN7-209ENST00000477554 CNGA1P29973 690 aa20.71■□□□□ 0.91
PTPN7-209ENST00000477554 IQCA1Q86XH1 822 aa20.71■□□□□ 0.91
PTPN7-209ENST00000477554 RNF146Q9NTX7 359 aa20.71■□□□□ 0.91
PTPN7-209ENST00000477554 OGDHLQ9ULD0 1010 aa20.71■□□□□ 0.91
PTPN7-209ENST00000477554 CTDP1Q9Y5B0 961 aaPredicted RBP20.71■□□□□ 0.91
PTPN7-209ENST00000477554 OAZ1P54368 228 aa20.7■□□□□ 0.9
PTPN7-209ENST00000477554 SLC35G1Q2M3R5 365 aa20.7■□□□□ 0.9
PTPN7-209ENST00000477554 STAG2Q8N3U4 1231 aa20.7■□□□□ 0.9
PTPN7-209ENST00000477554 TRERF1Q96PN7 1200 aa20.7■□□□□ 0.9
PTPN7-209ENST00000477554 ANO2Q9NQ90 1003 aa20.7■□□□□ 0.9
PTPN7-209ENST00000477554 SLC27A2O14975 620 aa20.7■□□□□ 0.9
PTPN7-209ENST00000477554 MB21D2Q8IYB1 491 aaPredicted RBP20.7■□□□□ 0.9
PTPN7-209ENST00000477554 KAT14Q9H8E8 782 aa20.7■□□□□ 0.9
PTPN7-209ENST00000477554 CNNM2Q9H8M5 875 aa20.7■□□□□ 0.9
PTPN7-209ENST00000477554 A1CFQ9NQ94 594 aaKnown RBP20.7■□□□□ 0.9
PTPN7-209ENST00000477554 PFASO15067 1338 aa20.69■□□□□ 0.9
PTPN7-209ENST00000477554 SNAI1O95863 264 aaPredicted RBP20.69■□□□□ 0.9
PTPN7-209ENST00000477554 TINF2Q9BSI4 451 aa20.69■□□□□ 0.9
PTPN7-209ENST00000477554 UBAC1Q9BSL1 405 aa20.69■□□□□ 0.9
PTPN7-209ENST00000477554 DDX20Q9UHI6 824 aaKnown RBP20.69■□□□□ 0.9
PTPN7-209ENST00000477554 CCPG1Q9ULG6 757 aa20.69■□□□□ 0.9
PTPN7-209ENST00000477554 NFIBO00712 420 aa20.68■□□□□ 0.9
PTPN7-209ENST00000477554 PTGS1P23219 599 aa20.68■□□□□ 0.9
PTPN7-209ENST00000477554 IRX5P78411 483 aaPredicted RBP20.68■□□□□ 0.9
PTPN7-209ENST00000477554 NECTIN1Q15223 517 aa20.68■□□□□ 0.9
PTPN7-209ENST00000477554 CREB3L3Q68CJ9 461 aa20.68■□□□□ 0.9
PTPN7-209ENST00000477554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.68■□□□□ 0.9
PTPN7-209ENST00000477554 ANKRD35Q8N283 1001 aa20.68■□□□□ 0.9
PTPN7-209ENST00000477554 CHST13Q8NET6 341 aa20.68■□□□□ 0.9
PTPN7-209ENST00000477554 DDX11Q96FC9 970 aa20.68■□□□□ 0.9
PTPN7-209ENST00000477554 SOWAHBA6NEL2 793 aa20.67■□□□□ 0.9
PTPN7-209ENST00000477554 ADCY6O43306 1168 aa20.67■□□□□ 0.9
PTPN7-209ENST00000477554 ICAM1P05362 532 aa20.67■□□□□ 0.9
PTPN7-209ENST00000477554 ZNF865P0CJ78 1059 aaPredicted RBP20.67■□□□□ 0.9
PTPN7-209ENST00000477554 COPB2P35606 906 aa20.67■□□□□ 0.9
PTPN7-209ENST00000477554 IFIT1BQ5T764 474 aaKnown RBP20.67■□□□□ 0.9
PTPN7-209ENST00000477554 ACAD9Q9H845 621 aa20.67■□□□□ 0.9
PTPN7-209ENST00000477554 CDC45O75419 566 aa20.66■□□□□ 0.9
PTPN7-209ENST00000477554 FAM133AQ8N9E0 248 aa20.66■□□□□ 0.9
PTPN7-209ENST00000477554 NCOA7Q8NI08 942 aa20.66■□□□□ 0.9
PTPN7-209ENST00000477554 CLEC4DQ8WXI8 215 aa20.66■□□□□ 0.9
PTPN7-209ENST00000477554 LRRC2Q9BYS8 371 aa20.66■□□□□ 0.9
PTPN7-209ENST00000477554 LRRC37A2A6NM11 1700 aa20.65■□□□□ 0.9
PTPN7-209ENST00000477554 IFIT3O14879 490 aaKnown RBP20.65■□□□□ 0.9
PTPN7-209ENST00000477554 KIAA1211Q6ZU35 1233 aa20.65■□□□□ 0.9
PTPN7-209ENST00000477554 RASEFQ8IZ41 740 aa20.65■□□□□ 0.9
PTPN7-209ENST00000477554 ADGRF4Q8IZF3 695 aa20.65■□□□□ 0.9
PTPN7-209ENST00000477554 IGDCC4Q8TDY8 1250 aa20.65■□□□□ 0.9
PTPN7-209ENST00000477554 MYL10Q9BUA6 226 aa20.65■□□□□ 0.9
PTPN7-209ENST00000477554 VAT1LQ9HCJ6 419 aa20.65■□□□□ 0.9
PTPN7-209ENST00000477554 SLC5A4Q9NY91 659 aa20.65■□□□□ 0.9
PTPN7-209ENST00000477554 CYP39A1Q9NYL5 469 aa20.65■□□□□ 0.9
PTPN7-209ENST00000477554 MAD2L2Q9UI95 211 aa20.65■□□□□ 0.9
PTPN7-209ENST00000477554 DIS3Q9Y2L1 958 aaKnown RBP20.65■□□□□ 0.9
PTPN7-209ENST00000477554 RANBP2P49792 3224 aaKnown RBP20.64■□□□□ 0.9
PTPN7-209ENST00000477554 H0YGN5 161 aa20.64■□□□□ 0.89
PTPN7-209ENST00000477554 FDX1P10109 184 aa20.64■□□□□ 0.89
PTPN7-209ENST00000477554 TRDNQ13061 729 aa20.64■□□□□ 0.89
PTPN7-209ENST00000477554 USH1GQ495M9 461 aa20.64■□□□□ 0.89
PTPN7-209ENST00000477554 TMEM63BQ5T3F8 832 aa20.64■□□□□ 0.89
PTPN7-209ENST00000477554 GJC2Q5T442 439 aaPredicted RBP20.64■□□□□ 0.89
PTPN7-209ENST00000477554 PRPF38BQ5VTL8 546 aaKnown RBP20.64■□□□□ 0.89
PTPN7-209ENST00000477554 CASC1Q6TDU7 716 aa20.64■□□□□ 0.89
PTPN7-209ENST00000477554 NSMFQ6X4W1 530 aa20.64■□□□□ 0.89
PTPN7-209ENST00000477554 SLC30A10Q6XR72 485 aa20.64■□□□□ 0.89
PTPN7-209ENST00000477554 TBC1D5Q92609 795 aa20.64■□□□□ 0.89
PTPN7-209ENST00000477554 DPF3Q92784 378 aa20.64■□□□□ 0.89
PTPN7-209ENST00000477554 BAZ2BQ9UIF8 2168 aaKnown RBP20.63■□□□□ 0.89
PTPN7-209ENST00000477554 SEPT4O43236 478 aa20.63■□□□□ 0.89
PTPN7-209ENST00000477554 COL6A1P12109 1028 aa20.63■□□□□ 0.89
PTPN7-209ENST00000477554 CDC37Q16543 378 aaPredicted RBP20.63■□□□□ 0.89
PTPN7-209ENST00000477554 ADCK5Q3MIX3 580 aa20.63■□□□□ 0.89
PTPN7-209ENST00000477554 RALYLQ86SE5 291 aaKnown RBP20.63■□□□□ 0.89
PTPN7-209ENST00000477554 RAB11FIP4Q86YS3 637 aa20.63■□□□□ 0.89
PTPN7-209ENST00000477554 CCDC144CPQ8IYA2 1237 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms