RNA–Protein interactions for RNA: ENST00000474386.1

DENND4B-206, Transcript of DENN domain containing 4B, human

TSL 3

Gene DENND4B, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND4B-206	ENST00000474386	CACNB2	Q08289	660 aa	Predicted RBP	13.64	□□□□□ -0.23
DENND4B-206	ENST00000474386	TRIM32	Q13049	653 aa		13.64	□□□□□ -0.23
DENND4B-206	ENST00000474386	OLFML2B	Q68BL8	750 aa		13.64	□□□□□ -0.23
DENND4B-206	ENST00000474386	NFXL1	Q6ZNB6	911 aa		13.64	□□□□□ -0.23
DENND4B-206	ENST00000474386	RASGRP2	Q7LDG7	609 aa		13.64	□□□□□ -0.23
DENND4B-206	ENST00000474386	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.64	□□□□□ -0.23
DENND4B-206	ENST00000474386	IGDCC4	Q8TDY8	1250 aa		13.64	□□□□□ -0.23
DENND4B-206	ENST00000474386	DEFB118	Q96PH6	123 aa		13.64	□□□□□ -0.23
DENND4B-206	ENST00000474386	NEK1	Q96PY6	1258 aa		13.64	□□□□□ -0.23
DENND4B-206	ENST00000474386	MTA3	Q9BTC8	594 aa		13.64	□□□□□ -0.23
DENND4B-206	ENST00000474386	RANBP17	Q9H2T7	1088 aa	Known RBP	13.64	□□□□□ -0.23
DENND4B-206	ENST00000474386	ACAD9	Q9H845	621 aa		13.64	□□□□□ -0.23
DENND4B-206	ENST00000474386	CCPG1	Q9ULG6	757 aa		13.64	□□□□□ -0.23
DENND4B-206	ENST00000474386	DIS3	Q9Y2L1	958 aa	Known RBP	13.64	□□□□□ -0.23
DENND4B-206	ENST00000474386	MYH8	P13535	1937 aa		13.63	□□□□□ -0.23
DENND4B-206	ENST00000474386	TSGA10IP	Q3SY00	556 aa		13.63	□□□□□ -0.23
DENND4B-206	ENST00000474386	U2AF1L4	Q8WU68	220 aa	Known RBP	13.63	□□□□□ -0.23
DENND4B-206	ENST00000474386	TMEM87B	Q96K49	555 aa		13.63	□□□□□ -0.23
DENND4B-206	ENST00000474386	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
DENND4B-206	ENST00000474386	VAT1L	Q9HCJ6	419 aa		13.63	□□□□□ -0.23
DENND4B-206	ENST00000474386	PAK6	Q9NQU5	681 aa	Predicted RBP	13.63	□□□□□ -0.23
DENND4B-206	ENST00000474386	RNF146	Q9NTX7	359 aa		13.63	□□□□□ -0.23
DENND4B-206	ENST00000474386	FLRT1	Q9NZU1	646 aa		13.63	□□□□□ -0.23
DENND4B-206	ENST00000474386	ZNF536	O15090	1300 aa		13.63	□□□□□ -0.23
DENND4B-206	ENST00000474386	GREB1L	Q9C091	1923 aa	Predicted RBP	13.62	□□□□□ -0.23
DENND4B-206	ENST00000474386	CCDC69	A6NI79	296 aa		13.62	□□□□□ -0.23
DENND4B-206	ENST00000474386	HMGB1	P09429	215 aa	Known RBP	13.62	□□□□□ -0.23
DENND4B-206	ENST00000474386	CNGA1	P29973	690 aa		13.62	□□□□□ -0.23
DENND4B-206	ENST00000474386	CYP2C19	P33261	490 aa		13.62	□□□□□ -0.23
DENND4B-206	ENST00000474386	ZNF792	Q3KQV3	632 aa		13.62	□□□□□ -0.23
DENND4B-206	ENST00000474386	MAP3K21	Q5TCX8	1036 aa		13.62	□□□□□ -0.23
DENND4B-206	ENST00000474386	MAML3	Q96JK9	1138 aa		13.62	□□□□□ -0.23
DENND4B-206	ENST00000474386	KLRF2	D3W0D1	207 aa		13.61	□□□□□ -0.23
DENND4B-206	ENST00000474386	POTEB2	H3BUK9	544 aa		13.61	□□□□□ -0.23
DENND4B-206	ENST00000474386	EIF5B	O60841	1220 aa	Known RBP	13.61	□□□□□ -0.23
DENND4B-206	ENST00000474386	ANTXR2	P58335	489 aa		13.61	□□□□□ -0.23
DENND4B-206	ENST00000474386	SYNE3	Q6ZMZ3	975 aa		13.61	□□□□□ -0.23
DENND4B-206	ENST00000474386	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
DENND4B-206	ENST00000474386	DHX32	Q7L7V1	743 aa	Known RBP	13.61	□□□□□ -0.23
DENND4B-206	ENST00000474386	ADGRF4	Q8IZF3	695 aa		13.61	□□□□□ -0.23
DENND4B-206	ENST00000474386	MSL3	Q8N5Y2	521 aa	Known RBP	13.61	□□□□□ -0.23
DENND4B-206	ENST00000474386	NUP133	Q8WUM0	1156 aa		13.61	□□□□□ -0.23
DENND4B-206	ENST00000474386	TINF2	Q9BSI4	451 aa		13.61	□□□□□ -0.23
DENND4B-206	ENST00000474386	PALM3	A6NDB9	673 aa	Predicted RBP	13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	EPB41L2	O43491	1005 aa	Known RBP	13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	CCND3	P30281	292 aa	Predicted RBP	13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	KIF5B	P33176	963 aa		13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	HSPA4	P34932	840 aa		13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	LIFR	P42702	1097 aa		13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	FGD1	P98174	961 aa		13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	NSMF	Q6X4W1	530 aa		13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	RASEF	Q8IZ41	740 aa		13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	STAG2	Q8N3U4	1231 aa		13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	CTCFL	Q8NI51	663 aa	Predicted RBP	13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	CPVL	Q9H3G5	476 aa		13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	LY9	Q9HBG7	655 aa		13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	SENP2	Q9HC62	589 aa		13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	NRBP1	Q9UHY1	535 aa		13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	MAD2L2	Q9UI95	211 aa		13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	CNPY2	Q9Y2B0	182 aa		13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	SLC12A7	Q9Y666	1083 aa		13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	PFAS	O15067	1338 aa		13.6	□□□□□ -0.23
DENND4B-206	ENST00000474386	SH2B2	O14492	632 aa	Predicted RBP	13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	MSC	O60682	206 aa		13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	CALM1	P0DP23	149 aa		13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	CALM2	P0DP24	149 aa		13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	CALM3	P0DP25	149 aa		13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	PSMA5	P28066	241 aa		13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	TROAP	Q12815	778 aa		13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	TRAF1	Q13077	416 aa		13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	GRM4	Q14833	912 aa		13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	CDC37	Q16543	378 aa	Predicted RBP	13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	MAP3K14	Q99558	947 aa		13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	LZTS2	Q9BRK4	669 aa		13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	LRRC2	Q9BYS8	371 aa		13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	CRISPLD2	Q9H0B8	497 aa		13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	JMJD4	Q9H9V9	463 aa		13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	A1CF	Q9NQ94	594 aa	Known RBP	13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	ZSWIM8	A7E2V4	1837 aa		13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	WDR19	Q8NEZ3	1342 aa		13.59	□□□□□ -0.23
DENND4B-206	ENST00000474386	DNAJC25-GNG10	A0A024R161	153 aa		13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	PTPDC1	A2A3K4	754 aa		13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	ASB14	A6NK59	587 aa		13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	DDAH1	O94760	285 aa		13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	IGHA2	P01877	340 aa		13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	GNAQ	P50148	359 aa		13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	EXOSC10	Q01780	885 aa	Known RBP	13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	USH1G	Q495M9	461 aa		13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	MUM1L1	Q5H9M0	696 aa		13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	PRAMEF19	Q5SWL8	479 aa		13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	FBXO11	Q86XK2	927 aa		13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	MCF2L2	Q86YR7	1114 aa		13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	ZNF654	Q8IZM8	581 aa		13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	KCNB2	Q92953	911 aa		13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	GPHN	Q9NQX3	736 aa	Predicted RBP	13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	CYP39A1	Q9NYL5	469 aa		13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	DDX20	Q9UHI6	824 aa	Known RBP	13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	OGDHL	Q9ULD0	1010 aa		13.58	□□□□□ -0.24
DENND4B-206	ENST00000474386	MRPL11	Q9Y3B7	192 aa	Known RBP	13.58	□□□□□ -0.24

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