RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 TMTC2Q8N394 836 aa20.68■□□□□ 0.9
VPS72-204ENST00000471423 SLAIN1Q8ND83 568 aa20.68■□□□□ 0.9
VPS72-204ENST00000471423 NUP133Q8WUM0 1156 aa20.68■□□□□ 0.9
VPS72-204ENST00000471423 APBA2Q99767 749 aa20.68■□□□□ 0.9
VPS72-204ENST00000471423 HOMER2Q9NSB8 354 aa20.68■□□□□ 0.9
VPS72-204ENST00000471423 PALM3A6NDB9 673 aaPredicted RBP20.67■□□□□ 0.9
VPS72-204ENST00000471423 STRNO43815 780 aa20.67■□□□□ 0.9
VPS72-204ENST00000471423 EIF5BO60841 1220 aaKnown RBP20.67■□□□□ 0.9
VPS72-204ENST00000471423 ICAM1P05362 532 aa20.67■□□□□ 0.9
VPS72-204ENST00000471423 FCER1AP12319 257 aa20.67■□□□□ 0.9
VPS72-204ENST00000471423 CASTP20810 708 aaKnown RBP20.67■□□□□ 0.9
VPS72-204ENST00000471423 ADGRF4Q8IZF3 695 aa20.67■□□□□ 0.9
VPS72-204ENST00000471423 PXYLP1Q8TE99 480 aa20.67■□□□□ 0.9
VPS72-204ENST00000471423 ARMC5Q96C12 935 aa20.67■□□□□ 0.9
VPS72-204ENST00000471423 CCPG1Q9ULG6 757 aa20.67■□□□□ 0.9
VPS72-204ENST00000471423 KLRF2D3W0D1 207 aa20.66■□□□□ 0.9
VPS72-204ENST00000471423 DHX16O60231 1041 aaKnown RBP20.66■□□□□ 0.9
VPS72-204ENST00000471423 ALAS1P13196 640 aa20.66■□□□□ 0.9
VPS72-204ENST00000471423 RPS6KB1P23443 525 aa20.66■□□□□ 0.9
VPS72-204ENST00000471423 NBPF11Q86T75 865 aa20.66■□□□□ 0.9
VPS72-204ENST00000471423 SGMS1Q86VZ5 419 aa20.66■□□□□ 0.9
VPS72-204ENST00000471423 RAB11FIP4Q86YS3 637 aa20.66■□□□□ 0.9
VPS72-204ENST00000471423 ABRAQ8N0Z2 381 aa20.66■□□□□ 0.9
VPS72-204ENST00000471423 ZNF333Q96JL9 665 aa20.66■□□□□ 0.9
VPS72-204ENST00000471423 MMP19Q99542 508 aa20.66■□□□□ 0.9
VPS72-204ENST00000471423 BIN2Q9UBW5 565 aaPredicted RBP20.66■□□□□ 0.9
VPS72-204ENST00000471423 SLC12A7Q9Y666 1083 aa20.66■□□□□ 0.9
VPS72-204ENST00000471423 CCDC85CA6NKD9 419 aa20.65■□□□□ 0.9
VPS72-204ENST00000471423 XRCC5P13010 732 aaKnown RBP20.65■□□□□ 0.9
VPS72-204ENST00000471423 RXRAP19793 462 aa20.65■□□□□ 0.9
VPS72-204ENST00000471423 FGD1P98174 961 aa20.65■□□□□ 0.9
VPS72-204ENST00000471423 KCTD2Q14681 263 aa20.65■□□□□ 0.9
VPS72-204ENST00000471423 CDC37Q16543 378 aaPredicted RBP20.65■□□□□ 0.9
VPS72-204ENST00000471423 CCL14Q16627 93 aa20.65■□□□□ 0.9
VPS72-204ENST00000471423 CHST13Q8NET6 341 aa20.65■□□□□ 0.9
VPS72-204ENST00000471423 CTCFLQ8NI51 663 aaPredicted RBP20.65■□□□□ 0.9
VPS72-204ENST00000471423 TRIB2Q92519 343 aa20.65■□□□□ 0.9
VPS72-204ENST00000471423 VAT1LQ9HCJ6 419 aa20.65■□□□□ 0.9
VPS72-204ENST00000471423 RNF146Q9NTX7 359 aa20.65■□□□□ 0.9
VPS72-204ENST00000471423 FBXO40Q9UH90 709 aa20.65■□□□□ 0.9
VPS72-204ENST00000471423 BRCA2P51587 3418 aa20.65■□□□□ 0.9
VPS72-204ENST00000471423 COBLO75128 1261 aa20.64■□□□□ 0.89
VPS72-204ENST00000471423 MYCP01106 439 aaPredicted RBP20.64■□□□□ 0.89
VPS72-204ENST00000471423 TKFCQ3LXA3 575 aa20.64■□□□□ 0.89
VPS72-204ENST00000471423 APOA5Q6Q788 366 aa20.64■□□□□ 0.89
VPS72-204ENST00000471423 Q6ZUG5 572 aa20.64■□□□□ 0.89
VPS72-204ENST00000471423 DPP9Q86TI2 863 aa20.64■□□□□ 0.89
VPS72-204ENST00000471423 MICU3Q86XE3 530 aa20.64■□□□□ 0.89
VPS72-204ENST00000471423 CCDC144CPQ8IYA2 1237 aa20.64■□□□□ 0.89
VPS72-204ENST00000471423 NPLOC4Q8TAT6 608 aa20.64■□□□□ 0.89
VPS72-204ENST00000471423 TRERF1Q96PN7 1200 aa20.64■□□□□ 0.89
VPS72-204ENST00000471423 MAP3K14Q99558 947 aa20.64■□□□□ 0.89
VPS72-204ENST00000471423 ACAD9Q9H845 621 aa20.64■□□□□ 0.89
VPS72-204ENST00000471423 JMJD4Q9H9V9 463 aa20.64■□□□□ 0.89
VPS72-204ENST00000471423 HMGCRP04035 888 aa20.63■□□□□ 0.89
VPS72-204ENST00000471423 INHAP05111 366 aa20.63■□□□□ 0.89
VPS72-204ENST00000471423 PGK2P07205 417 aa20.63■□□□□ 0.89
VPS72-204ENST00000471423 HOXC6P09630 235 aa20.63■□□□□ 0.89
VPS72-204ENST00000471423 CALM1P0DP23 149 aa20.63■□□□□ 0.89
VPS72-204ENST00000471423 CALM2P0DP24 149 aa20.63■□□□□ 0.89
VPS72-204ENST00000471423 CALM3P0DP25 149 aa20.63■□□□□ 0.89
VPS72-204ENST00000471423 KIF5BP33176 963 aa20.63■□□□□ 0.89
VPS72-204ENST00000471423 SLC35G1Q2M3R5 365 aa20.63■□□□□ 0.89
VPS72-204ENST00000471423 MUM1L1Q5H9M0 696 aa20.63■□□□□ 0.89
VPS72-204ENST00000471423 RUFY3Q7L099 469 aa20.63■□□□□ 0.89
VPS72-204ENST00000471423 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.63■□□□□ 0.89
VPS72-204ENST00000471423 UPF3BQ9BZI7 483 aaKnown RBP20.63■□□□□ 0.89
VPS72-204ENST00000471423 ZSWIM6Q9HCJ5 1215 aa20.63■□□□□ 0.89
VPS72-204ENST00000471423 BRPF3Q9ULD4 1205 aa20.63■□□□□ 0.89
VPS72-204ENST00000471423 KLF18A0A0U1RQI7 1052 aa20.62■□□□□ 0.89
VPS72-204ENST00000471423 CAPN15O75808 1086 aa20.62■□□□□ 0.89
VPS72-204ENST00000471423 QRICH1Q2TAL8 776 aa20.62■□□□□ 0.89
VPS72-204ENST00000471423 USH1GQ495M9 461 aa20.62■□□□□ 0.89
VPS72-204ENST00000471423 SYNE3Q6ZMZ3 975 aa20.62■□□□□ 0.89
VPS72-204ENST00000471423 ANKRD35Q8N283 1001 aa20.62■□□□□ 0.89
VPS72-204ENST00000471423 BRF1Q92994 677 aa20.62■□□□□ 0.89
VPS72-204ENST00000471423 TM6SF1Q9BZW5 370 aa20.62■□□□□ 0.89
VPS72-204ENST00000471423 FLRT1Q9NZU1 646 aa20.62■□□□□ 0.89
VPS72-204ENST00000471423 CYP46A1Q9Y6A2 500 aa20.62■□□□□ 0.89
VPS72-204ENST00000471423 ANAPC15P60006 121 aa20.61■□□□□ 0.89
VPS72-204ENST00000471423 UBXN2AP68543 259 aa20.61■□□□□ 0.89
VPS72-204ENST00000471423 APOBRQ0VD83 1088 aa20.61■□□□□ 0.89
VPS72-204ENST00000471423 TRIM32Q13049 653 aa20.61■□□□□ 0.89
VPS72-204ENST00000471423 MTFR1Q15390 333 aa20.61■□□□□ 0.89
VPS72-204ENST00000471423 HOMER1Q86YM7 354 aa20.61■□□□□ 0.89
VPS72-204ENST00000471423 TRMT44Q8IYL2 757 aaKnown RBP20.61■□□□□ 0.89
VPS72-204ENST00000471423 DDX11Q96FC9 970 aa20.61■□□□□ 0.89
VPS72-204ENST00000471423 SLC5A4Q9NY91 659 aa20.61■□□□□ 0.89
VPS72-204ENST00000471423 SMCHD1A6NHR9 2005 aa20.61■□□□□ 0.89
VPS72-204ENST00000471423 ZNFX1Q9P2E3 1918 aaKnown RBP20.61■□□□□ 0.89
VPS72-204ENST00000471423 ZBTB43O43298 467 aa20.6■□□□□ 0.89
VPS72-204ENST00000471423 CYTH3O43739 400 aa20.6■□□□□ 0.89
VPS72-204ENST00000471423 PLEKHA8P1O95397 391 aa20.6■□□□□ 0.89
VPS72-204ENST00000471423 FANCBQ8NB91 859 aa20.6■□□□□ 0.89
VPS72-204ENST00000471423 MTMR8Q96EF0 704 aa20.6■□□□□ 0.89
VPS72-204ENST00000471423 AGXT2Q9BYV1 514 aa20.6■□□□□ 0.89
VPS72-204ENST00000471423 RIOX1Q9H6W3 641 aa20.6■□□□□ 0.89
VPS72-204ENST00000471423 A1CFQ9NQ94 594 aaKnown RBP20.6■□□□□ 0.89
VPS72-204ENST00000471423 PNMA2Q9UL42 364 aa20.6■□□□□ 0.89
VPS72-204ENST00000471423 NAP1L2Q9ULW6 460 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms