RNA–Protein interactions for RNA: ENST00000465902.1

USP19-210, Transcript of ubiquitin specific peptidase 19, human

TSL 3

Gene USP19, Length 617 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP19-210	ENST00000465902	SENP2	Q9HC62	589 aa		20.74	■□□□□ 0.91
USP19-210	ENST00000465902	SLC5A4	Q9NY91	659 aa		20.74	■□□□□ 0.91
USP19-210	ENST00000465902	ALAS1	P13196	640 aa		20.73	■□□□□ 0.91
USP19-210	ENST00000465902	CCL5	P13501	91 aa		20.73	■□□□□ 0.91
USP19-210	ENST00000465902	PRPF38B	Q5VTL8	546 aa	Known RBP	20.73	■□□□□ 0.91
USP19-210	ENST00000465902	TRMT44	Q8IYL2	757 aa	Known RBP	20.73	■□□□□ 0.91
USP19-210	ENST00000465902	TMEM87B	Q96K49	555 aa		20.73	■□□□□ 0.91
USP19-210	ENST00000465902	LRRC2	Q9BYS8	371 aa		20.73	■□□□□ 0.91
USP19-210	ENST00000465902	RNF208	Q9H0X6	261 aa		20.73	■□□□□ 0.91
USP19-210	ENST00000465902	GPHN	Q9NQX3	736 aa	Predicted RBP	20.73	■□□□□ 0.91
USP19-210	ENST00000465902	CCPG1	Q9ULG6	757 aa		20.73	■□□□□ 0.91
USP19-210	ENST00000465902	BAZ2B	Q9UIF8	2168 aa	Known RBP	20.73	■□□□□ 0.91
USP19-210	ENST00000465902	RBBP6	Q7Z6E9	1792 aa	Known RBP	20.72	■□□□□ 0.91
USP19-210	ENST00000465902	ZNF236	Q9UL36	1845 aa		20.72	■□□□□ 0.91
USP19-210	ENST00000465902	ABRA	Q8N0Z2	381 aa		20.72	■□□□□ 0.91
USP19-210	ENST00000465902	NPLOC4	Q8TAT6	608 aa		20.72	■□□□□ 0.91
USP19-210	ENST00000465902	NUP133	Q8WUM0	1156 aa		20.72	■□□□□ 0.91
USP19-210	ENST00000465902	DDX11	Q96FC9	970 aa		20.72	■□□□□ 0.91
USP19-210	ENST00000465902	VAT1L	Q9HCJ6	419 aa		20.72	■□□□□ 0.91
USP19-210	ENST00000465902	CCDC69	A6NI79	296 aa		20.71	■□□□□ 0.91
USP19-210	ENST00000465902	COBL	O75128	1261 aa		20.71	■□□□□ 0.91
USP19-210	ENST00000465902	PGK2	P07205	417 aa		20.71	■□□□□ 0.91
USP19-210	ENST00000465902	HSPA4	P34932	840 aa		20.71	■□□□□ 0.91
USP19-210	ENST00000465902	TRIM32	Q13049	653 aa		20.71	■□□□□ 0.91
USP19-210	ENST00000465902	COL9A3	Q14050	684 aa	Predicted RBP	20.71	■□□□□ 0.91
USP19-210	ENST00000465902	ADCK5	Q3MIX3	580 aa		20.71	■□□□□ 0.91
USP19-210	ENST00000465902	ANKRD35	Q8N283	1001 aa		20.71	■□□□□ 0.91
USP19-210	ENST00000465902	CHST13	Q8NET6	341 aa		20.71	■□□□□ 0.91
USP19-210	ENST00000465902	UNC93B1	Q9H1C4	597 aa		20.71	■□□□□ 0.91
USP19-210	ENST00000465902	RANBP17	Q9H2T7	1088 aa	Known RBP	20.71	■□□□□ 0.91
USP19-210	ENST00000465902	LY9	Q9HBG7	655 aa		20.71	■□□□□ 0.91
USP19-210	ENST00000465902	RNF146	Q9NTX7	359 aa		20.71	■□□□□ 0.91
USP19-210	ENST00000465902	FBXO40	Q9UH90	709 aa		20.71	■□□□□ 0.91
USP19-210	ENST00000465902	ZNF536	O15090	1300 aa		20.71	■□□□□ 0.91
USP19-210	ENST00000465902	KLRF2	D3W0D1	207 aa		20.7	■□□□□ 0.9
USP19-210	ENST00000465902	SH2B2	O14492	632 aa	Predicted RBP	20.7	■□□□□ 0.9
USP19-210	ENST00000465902	ICAM1	P05362	532 aa		20.7	■□□□□ 0.9
USP19-210	ENST00000465902	TSGA10IP	Q3SY00	556 aa		20.7	■□□□□ 0.9
USP19-210	ENST00000465902	MFSD14C	Q5VZR4	134 aa		20.7	■□□□□ 0.9
USP19-210	ENST00000465902	TMTC2	Q8N394	836 aa		20.7	■□□□□ 0.9
USP19-210	ENST00000465902	STAG2	Q8N3U4	1231 aa		20.7	■□□□□ 0.9
USP19-210	ENST00000465902	TCEANC2	Q96MN5	208 aa		20.7	■□□□□ 0.9
USP19-210	ENST00000465902	JAKMIP1	Q96N16	626 aa	Known RBP	20.7	■□□□□ 0.9
USP19-210	ENST00000465902	TRERF1	Q96PN7	1200 aa		20.7	■□□□□ 0.9
USP19-210	ENST00000465902	MTA3	Q9BTC8	594 aa		20.7	■□□□□ 0.9
USP19-210	ENST00000465902	ACAD9	Q9H845	621 aa		20.7	■□□□□ 0.9
USP19-210	ENST00000465902	SNX14	Q9Y5W7	946 aa		20.7	■□□□□ 0.9
USP19-210	ENST00000465902	HOXC6	P09630	235 aa		20.69	■□□□□ 0.9
USP19-210	ENST00000465902	PRKAR2A	P13861	404 aa	Known RBP	20.69	■□□□□ 0.9
USP19-210	ENST00000465902	TAL1	P17542	331 aa	Predicted RBP	20.69	■□□□□ 0.9
USP19-210	ENST00000465902	FGD1	P98174	961 aa		20.69	■□□□□ 0.9
USP19-210	ENST00000465902	TKFC	Q3LXA3	575 aa		20.69	■□□□□ 0.9
USP19-210	ENST00000465902	DHX32	Q7L7V1	743 aa	Known RBP	20.69	■□□□□ 0.9
USP19-210	ENST00000465902	ADGRF4	Q8IZF3	695 aa		20.69	■□□□□ 0.9
USP19-210	ENST00000465902	ZNF654	Q8IZM8	581 aa		20.69	■□□□□ 0.9
USP19-210	ENST00000465902	HMX1	Q9NP08	348 aa	Predicted RBP	20.69	■□□□□ 0.9
USP19-210	ENST00000465902	FLRT1	Q9NZU1	646 aa		20.69	■□□□□ 0.9
USP19-210	ENST00000465902	GJB1	P08034	283 aa		20.68	■□□□□ 0.9
USP19-210	ENST00000465902	HMGB1	P09429	215 aa	Known RBP	20.68	■□□□□ 0.9
USP19-210	ENST00000465902	GRM4	Q14833	912 aa		20.68	■□□□□ 0.9
USP19-210	ENST00000465902	MYL10	Q9BUA6	226 aa		20.68	■□□□□ 0.9
USP19-210	ENST00000465902	USP26	Q9BXU7	913 aa		20.68	■□□□□ 0.9
USP19-210	ENST00000465902	MAD2L2	Q9UI95	211 aa		20.68	■□□□□ 0.9
USP19-210	ENST00000465902	CYP2C19	P33261	490 aa		20.67	■□□□□ 0.9
USP19-210	ENST00000465902	LIFR	P42702	1097 aa		20.67	■□□□□ 0.9
USP19-210	ENST00000465902	TROAP	Q12815	778 aa		20.67	■□□□□ 0.9
USP19-210	ENST00000465902	CDC37	Q16543	378 aa	Predicted RBP	20.67	■□□□□ 0.9
USP19-210	ENST00000465902	USH1G	Q495M9	461 aa		20.67	■□□□□ 0.9
USP19-210	ENST00000465902	MUM1L1	Q5H9M0	696 aa		20.67	■□□□□ 0.9
USP19-210	ENST00000465902	SYNE3	Q6ZMZ3	975 aa		20.67	■□□□□ 0.9
USP19-210	ENST00000465902	CTCFL	Q8NI51	663 aa	Predicted RBP	20.67	■□□□□ 0.9
USP19-210	ENST00000465902	MAML3	Q96JK9	1138 aa		20.67	■□□□□ 0.9
USP19-210	ENST00000465902	SLC12A7	Q9Y666	1083 aa		20.67	■□□□□ 0.9
USP19-210	ENST00000465902	RPTOR	Q8N122	1335 aa		20.67	■□□□□ 0.9
USP19-210	ENST00000465902	PALM3	A6NDB9	673 aa	Predicted RBP	20.66	■□□□□ 0.9
USP19-210	ENST00000465902	EPB41L2	O43491	1005 aa	Known RBP	20.66	■□□□□ 0.9
USP19-210	ENST00000465902	DDAH1	O94760	285 aa		20.66	■□□□□ 0.9
USP19-210	ENST00000465902	CPA1	P15085	419 aa		20.66	■□□□□ 0.9
USP19-210	ENST00000465902	GJA8	P48165	433 aa		20.66	■□□□□ 0.9
USP19-210	ENST00000465902	CACNB2	Q08289	660 aa	Predicted RBP	20.66	■□□□□ 0.9
USP19-210	ENST00000465902	BLOC1S2	Q6QNY1	142 aa		20.66	■□□□□ 0.9
USP19-210	ENST00000465902	NSMF	Q6X4W1	530 aa		20.66	■□□□□ 0.9
USP19-210	ENST00000465902	RAB11FIP4	Q86YS3	637 aa		20.66	■□□□□ 0.9
USP19-210	ENST00000465902	KCNB2	Q92953	911 aa		20.66	■□□□□ 0.9
USP19-210	ENST00000465902	SHISA4	Q96DD7	197 aa		20.66	■□□□□ 0.9
USP19-210	ENST00000465902	DEFB118	Q96PH6	123 aa		20.66	■□□□□ 0.9
USP19-210	ENST00000465902	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	20.66	■□□□□ 0.9
USP19-210	ENST00000465902	PNMA2	Q9UL42	364 aa		20.66	■□□□□ 0.9
USP19-210	ENST00000465902	MCM3AP	O60318	1980 aa		20.66	■□□□□ 0.9
USP19-210	ENST00000465902	WDR19	Q8NEZ3	1342 aa		20.65	■□□□□ 0.9
USP19-210	ENST00000465902	RXRA	P19793	462 aa		20.65	■□□□□ 0.9
USP19-210	ENST00000465902	PSMA5	P28066	241 aa		20.65	■□□□□ 0.9
USP19-210	ENST00000465902	CNGA1	P29973	690 aa		20.65	■□□□□ 0.9
USP19-210	ENST00000465902	KIF5B	P33176	963 aa		20.65	■□□□□ 0.9
USP19-210	ENST00000465902	EXOSC10	Q01780	885 aa	Known RBP	20.65	■□□□□ 0.9
USP19-210	ENST00000465902	ZNF792	Q3KQV3	632 aa		20.65	■□□□□ 0.9
USP19-210	ENST00000465902	OLFML2B	Q68BL8	750 aa		20.65	■□□□□ 0.9
USP19-210	ENST00000465902	CCDC144CP	Q8IYA2	1237 aa		20.65	■□□□□ 0.9
USP19-210	ENST00000465902	JMJD4	Q9H9V9	463 aa		20.65	■□□□□ 0.9
USP19-210	ENST00000465902	A1CF	Q9NQ94	594 aa	Known RBP	20.65	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms