RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 HOMER2Q9NSB8 354 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 CCPG1Q9ULG6 757 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 PLXNA1Q9UIW2 1896 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 DHX16O60231 1041 aaKnown RBP12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 COBLO75128 1261 aa12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 ICAM1P05362 532 aa12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 PRKAR2AP13861 404 aaKnown RBP12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 EN2P19622 333 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 RGS19P49795 217 aa12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 NFXL1Q6ZNB6 911 aa12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 ANKRD35Q8N283 1001 aa12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 IGDCC4Q8TDY8 1250 aa12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 TRERF1Q96PN7 1200 aa12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 NEK1Q96PY6 1258 aa12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 UBA5Q9GZZ9 404 aa12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.36□□□□□ -0.438e-6■■□□□ 13.2
TRAPPC12-213ENST00000461577 ACAD9Q9H845 621 aa12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 RNF146Q9NTX7 359 aa12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 PNMA2Q9UL42 364 aa12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 HTTP42858 3142 aa12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 ZNF536O15090 1300 aa12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 RPTORQ8N122 1335 aa12.36□□□□□ -0.43
TRAPPC12-213ENST00000461577 MYH6P13533 1939 aa12.35□□□□□ -0.43
TRAPPC12-213ENST00000461577 CCDC69A6NI79 296 aa12.35□□□□□ -0.43
TRAPPC12-213ENST00000461577 PGK2P07205 417 aa12.35□□□□□ -0.43
TRAPPC12-213ENST00000461577 GJB1P08034 283 aa12.35□□□□□ -0.43
TRAPPC12-213ENST00000461577 CACNB2Q08289 660 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC12-213ENST00000461577 TSGA10IPQ3SY00 556 aa12.35□□□□□ -0.43
TRAPPC12-213ENST00000461577 OLFML2BQ68BL8 750 aa12.35□□□□□ -0.43
TRAPPC12-213ENST00000461577 RASEFQ8IZ41 740 aa12.35□□□□□ -0.43
TRAPPC12-213ENST00000461577 TMTC2Q8N394 836 aa12.35□□□□□ -0.43
TRAPPC12-213ENST00000461577 CPVLQ9H3G5 476 aa12.35□□□□□ -0.43
TRAPPC12-213ENST00000461577 LY9Q9HBG7 655 aa12.35□□□□□ -0.43
TRAPPC12-213ENST00000461577 SENP2Q9HC62 589 aa12.35□□□□□ -0.43
TRAPPC12-213ENST00000461577 VAT1LQ9HCJ6 419 aa12.35□□□□□ -0.43
TRAPPC12-213ENST00000461577 FLRT1Q9NZU1 646 aa12.35□□□□□ -0.43
TRAPPC12-213ENST00000461577 DIS3Q9Y2L1 958 aaKnown RBP12.35□□□□□ -0.43
TRAPPC12-213ENST00000461577 KLRF2D3W0D1 207 aa12.34□□□□□ -0.43
TRAPPC12-213ENST00000461577 SH2B2O14492 632 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC12-213ENST00000461577 HSPA4P34932 840 aa12.34□□□□□ -0.43
TRAPPC12-213ENST00000461577 GJA8P48165 433 aa12.34□□□□□ -0.43
TRAPPC12-213ENST00000461577 MLLT1Q03111 559 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC12-213ENST00000461577 GRM4Q14833 912 aa12.34□□□□□ -0.43
TRAPPC12-213ENST00000461577 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRAPPC12-213ENST00000461577 ADGRF4Q8IZF3 695 aa12.34□□□□□ -0.43
TRAPPC12-213ENST00000461577 ZNF654Q8IZM8 581 aa12.34□□□□□ -0.43
TRAPPC12-213ENST00000461577 STAG2Q8N3U4 1231 aa12.34□□□□□ -0.43
TRAPPC12-213ENST00000461577 NUP133Q8WUM0 1156 aa12.34□□□□□ -0.43
TRAPPC12-213ENST00000461577 MAML3Q96JK9 1138 aa12.34□□□□□ -0.43
TRAPPC12-213ENST00000461577 DEFB118Q96PH6 123 aa12.34□□□□□ -0.43
TRAPPC12-213ENST00000461577 LRRC2Q9BYS8 371 aa12.34□□□□□ -0.43
TRAPPC12-213ENST00000461577 KIAA0100Q14667 2235 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 PALM3A6NDB9 673 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 EPB41L2O43491 1005 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 DDAH1O94760 285 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 SGPL1O95470 568 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 TFRCP02786 760 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 HMGB1P09429 215 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 TAL1P17542 331 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 CAPN2P17655 700 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 CNGA1P29973 690 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 CYP2C19P33261 490 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 LIFRP42702 1097 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 CDC37Q16543 378 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 ZNF792Q3KQV3 632 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 ADCK5Q3MIX3 580 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 MAP3K21Q5TCX8 1036 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 SYNE3Q6ZMZ3 975 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 DHX32Q7L7V1 743 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 CTCFLQ8NI51 663 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 U2AF1L4Q8WU68 220 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 KCNB2Q92953 911 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 PAK6Q9NQU5 681 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 GPHNQ9NQX3 736 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 MAD2L2Q9UI95 211 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 SNX14Q9Y5W7 946 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 SMCHD1A6NHR9 2005 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 PFASO15067 1338 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.44
TRAPPC12-213ENST00000461577 DNAJC25-GNG10A0A024R161 153 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 EIF5BO60841 1220 aaKnown RBP12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 CALM1P0DP23 149 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 CALM2P0DP24 149 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 CALM3P0DP25 149 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 CCND3P30281 292 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 KIF5BP33176 963 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 FGD1P98174 961 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 TROAPQ12815 778 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 USH1GQ495M9 461 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 MUM1L1Q5H9M0 696 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 NSMFQ6X4W1 530 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 JAKMIP1Q96N16 626 aaKnown RBP12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 MAP3K14Q99558 947 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 TINF2Q9BSI4 451 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 MYL10Q9BUA6 226 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 JMJD4Q9H9V9 463 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 A1CFQ9NQ94 594 aaKnown RBP12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 SLC12A7Q9Y666 1083 aa12.32□□□□□ -0.44
TRAPPC12-213ENST00000461577 CENPFP49454 3210 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms