RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 PLXNA1Q9UIW2 1896 aa24.3■■□□□ 1.48
VARS-218ENST00000459667 GOLGA8HP0CJ92 632 aa24.29■■□□□ 1.48
VARS-218ENST00000459667 CYP2C19P33261 490 aa24.29■■□□□ 1.48
VARS-218ENST00000459667 CREB3L3Q68CJ9 461 aa24.29■■□□□ 1.48
VARS-218ENST00000459667 MAML3Q96JK9 1138 aa24.29■■□□□ 1.48
VARS-218ENST00000459667 RANBP17Q9H2T7 1088 aaKnown RBP24.29■■□□□ 1.48
VARS-218ENST00000459667 ERICH2A1L162 156 aa24.28■■□□□ 1.48
VARS-218ENST00000459667 IFIT3O14879 490 aaKnown RBP24.28■■□□□ 1.48
VARS-218ENST00000459667 CCND3P30281 292 aaPredicted RBP24.28■■□□□ 1.48
VARS-218ENST00000459667 SART3Q15020 963 aaKnown RBP24.28■■□□□ 1.48
VARS-218ENST00000459667 NECTIN1Q15223 517 aa24.28■■□□□ 1.48
VARS-218ENST00000459667 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.28■■□□□ 1.48
VARS-218ENST00000459667 MB21D2Q8IYB1 491 aaPredicted RBP24.28■■□□□ 1.48
VARS-218ENST00000459667 DDX11Q96FC9 970 aa24.28■■□□□ 1.48
VARS-218ENST00000459667 ACAD9Q9H845 621 aa24.28■■□□□ 1.48
VARS-218ENST00000459667 RNF146Q9NTX7 359 aa24.28■■□□□ 1.48
VARS-218ENST00000459667 IGHA2P01877 340 aa24.27■■□□□ 1.48
VARS-218ENST00000459667 TFRCP02786 760 aaKnown RBP24.27■■□□□ 1.48
VARS-218ENST00000459667 ALAS1P13196 640 aa24.27■■□□□ 1.48
VARS-218ENST00000459667 ZNF792Q3KQV3 632 aa24.27■■□□□ 1.48
VARS-218ENST00000459667 TKFCQ3LXA3 575 aa24.27■■□□□ 1.48
VARS-218ENST00000459667 ASPRV1Q53RT3 343 aa24.27■■□□□ 1.48
VARS-218ENST00000459667 CHST3Q7LGC8 479 aa24.27■■□□□ 1.48
VARS-218ENST00000459667 ANKRD35Q8N283 1001 aa24.27■■□□□ 1.48
VARS-218ENST00000459667 CRISPLD2Q9H0B8 497 aa24.27■■□□□ 1.48
VARS-218ENST00000459667 CCPG1Q9ULG6 757 aa24.27■■□□□ 1.48
VARS-218ENST00000459667 ICAM1P05362 532 aa24.26■■□□□ 1.47
VARS-218ENST00000459667 CAPN2P17655 700 aa24.26■■□□□ 1.47
VARS-218ENST00000459667 ANTXR2P58335 489 aa24.26■■□□□ 1.47
VARS-218ENST00000459667 DIS3Q9Y2L1 958 aaKnown RBP24.26■■□□□ 1.47
VARS-218ENST00000459667 PARP1P09874 1014 aaKnown RBP24.25■■□□□ 1.47
VARS-218ENST00000459667 CYBAP13498 195 aa24.25■■□□□ 1.47
VARS-218ENST00000459667 WTAPQ15007 396 aa24.25■■□□□ 1.47
VARS-218ENST00000459667 RNF20Q5VTR2 975 aa24.25■■□□□ 1.47
VARS-218ENST00000459667 TRERF1Q96PN7 1200 aa24.25■■□□□ 1.47
VARS-218ENST00000459667 UBA5Q9GZZ9 404 aa24.25■■□□□ 1.47
VARS-218ENST00000459667 DNAJC25-GNG10A0A024R161 153 aa24.24■■□□□ 1.47
VARS-218ENST00000459667 TMEM67Q5HYA8 995 aa24.24■■□□□ 1.47
VARS-218ENST00000459667 CPVLQ9H3G5 476 aa24.24■■□□□ 1.47
VARS-218ENST00000459667 FARP2O94887 1054 aaPredicted RBP24.23■■□□□ 1.47
VARS-218ENST00000459667 TAL1P17542 331 aaPredicted RBP24.23■■□□□ 1.47
VARS-218ENST00000459667 CNGA1P29973 690 aa24.23■■□□□ 1.47
VARS-218ENST00000459667 TRPV1Q8NER1 839 aa24.23■■□□□ 1.47
VARS-218ENST00000459667 TINF2Q9BSI4 451 aa24.23■■□□□ 1.47
VARS-218ENST00000459667 SENP2Q9HC62 589 aa24.23■■□□□ 1.47
VARS-218ENST00000459667 A1CFQ9NQ94 594 aaKnown RBP24.23■■□□□ 1.47
VARS-218ENST00000459667 TNRC18O15417 2968 aaPredicted RBP24.22■■□□□ 1.47
VARS-218ENST00000459667 FRMPD3Q5JV73 1810 aa24.22■■□□□ 1.47
VARS-218ENST00000459667 PRC1O43663 620 aa24.22■■□□□ 1.47
VARS-218ENST00000459667 MCM5P33992 734 aa24.22■■□□□ 1.47
VARS-218ENST00000459667 MUM1L1Q5H9M0 696 aa24.22■■□□□ 1.47
VARS-218ENST00000459667 PNMA2Q9UL42 364 aa24.22■■□□□ 1.47
VARS-218ENST00000459667 SMCHD1A6NHR9 2005 aa24.22■■□□□ 1.47
VARS-218ENST00000459667 WDR19Q8NEZ3 1342 aa24.21■■□□□ 1.47
VARS-218ENST00000459667 UBE2Q1Q7Z7E8 422 aa24.21■■□□□ 1.47
VARS-218ENST00000459667 ADGRF4Q8IZF3 695 aa24.21■■□□□ 1.47
VARS-218ENST00000459667 IGDCC4Q8TDY8 1250 aa24.21■■□□□ 1.47
VARS-218ENST00000459667 MTA3Q9BTC8 594 aa24.21■■□□□ 1.47
VARS-218ENST00000459667 DDX20Q9UHI6 824 aaKnown RBP24.21■■□□□ 1.47
VARS-218ENST00000459667 OGDHLQ9ULD0 1010 aa24.21■■□□□ 1.47
VARS-218ENST00000459667 PFASO15067 1338 aa24.2■■□□□ 1.46
VARS-218ENST00000459667 DHX16O60231 1041 aaKnown RBP24.2■■□□□ 1.46
VARS-218ENST00000459667 MSCO60682 206 aa24.2■■□□□ 1.46
VARS-218ENST00000459667 CDC37Q16543 378 aaPredicted RBP24.2■■□□□ 1.46
VARS-218ENST00000459667 PRAMEF19Q5SWL8 479 aa24.2■■□□□ 1.46
VARS-218ENST00000459667 LHX8Q68G74 356 aa24.2■■□□□ 1.46
VARS-218ENST00000459667 STAG2Q8N3U4 1231 aa24.2■■□□□ 1.46
VARS-218ENST00000459667 MSL3Q8N5Y2 521 aaKnown RBP24.2■■□□□ 1.46
VARS-218ENST00000459667 ANKLE1Q8NAG6 615 aa24.2■■□□□ 1.46
VARS-218ENST00000459667 POTEB2H3BUK9 544 aa24.19■■□□□ 1.46
VARS-218ENST00000459667 COL9A3Q14050 684 aaPredicted RBP24.19■■□□□ 1.46
VARS-218ENST00000459667 GRM4Q14833 912 aa24.19■■□□□ 1.46
VARS-218ENST00000459667 NSMFQ6X4W1 530 aa24.19■■□□□ 1.46
VARS-218ENST00000459667 CATIPQ7Z7H3 387 aa24.19■■□□□ 1.46
VARS-218ENST00000459667 ZNF467Q7Z7K2 595 aaPredicted RBP24.19■■□□□ 1.46
VARS-218ENST00000459667 TMEM87BQ96K49 555 aa24.19■■□□□ 1.46
VARS-218ENST00000459667 FGD4Q96M96 766 aa24.19■■□□□ 1.46
VARS-218ENST00000459667 LY9Q9HBG7 655 aa24.19■■□□□ 1.46
VARS-218ENST00000459667 NRBP1Q9UHY1 535 aa24.19■■□□□ 1.46
VARS-218ENST00000459667 MAD2L2Q9UI95 211 aa24.19■■□□□ 1.46
VARS-218ENST00000459667 PDE4DIPQ5VU43 2346 aa24.19■■□□□ 1.46
VARS-218ENST00000459667 SYNGAP1Q96PV0 1343 aa24.18■■□□□ 1.46
VARS-218ENST00000459667 KLRF2D3W0D1 207 aa24.18■■□□□ 1.46
VARS-218ENST00000459667 CNTN2Q02246 1040 aa24.18■■□□□ 1.46
VARS-218ENST00000459667 MAMDC4Q6UXC1 1216 aa24.18■■□□□ 1.46
VARS-218ENST00000459667 FAM133AQ8N9E0 248 aa24.18■■□□□ 1.46
VARS-218ENST00000459667 GPHNQ9NQX3 736 aaPredicted RBP24.18■■□□□ 1.46
VARS-218ENST00000459667 CYP39A1Q9NYL5 469 aa24.18■■□□□ 1.46
VARS-218ENST00000459667 CNPY2Q9Y2B0 182 aa24.18■■□□□ 1.46
VARS-218ENST00000459667 PALM3A6NDB9 673 aaPredicted RBP24.17■■□□□ 1.46
VARS-218ENST00000459667 NFIBO00712 420 aa24.17■■□□□ 1.46
VARS-218ENST00000459667 SH2B2O14492 632 aaPredicted RBP24.17■■□□□ 1.46
VARS-218ENST00000459667 SEPT4O43236 478 aa24.17■■□□□ 1.46
VARS-218ENST00000459667 REC8O95072 547 aa24.17■■□□□ 1.46
VARS-218ENST00000459667 TROAPQ12815 778 aa24.17■■□□□ 1.46
VARS-218ENST00000459667 USH1GQ495M9 461 aa24.17■■□□□ 1.46
VARS-218ENST00000459667 RASEFQ8IZ41 740 aa24.17■■□□□ 1.46
VARS-218ENST00000459667 DIS3LQ8TF46 1054 aaKnown RBP24.17■■□□□ 1.46
VARS-218ENST00000459667 NEK1Q96PY6 1258 aa24.17■■□□□ 1.46
VARS-218ENST00000459667 JMJD4Q9H9V9 463 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms