RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 HOMER2Q9NSB8 354 aa18.12■□□□□ 0.49
VPS8-213ENST00000453056 CCPG1Q9ULG6 757 aa18.12■□□□□ 0.49
VPS8-213ENST00000453056 SMCHD1A6NHR9 2005 aa18.11■□□□□ 0.49
VPS8-213ENST00000453056 BAZ2BQ9UIF8 2168 aaKnown RBP18.11■□□□□ 0.49
VPS8-213ENST00000453056 ICAM1P05362 532 aa18.11■□□□□ 0.49
VPS8-213ENST00000453056 CAPN2P17655 700 aa18.11■□□□□ 0.49
VPS8-213ENST00000453056 MLLT1Q03111 559 aaPredicted RBP18.11■□□□□ 0.49
VPS8-213ENST00000453056 OLFML2BQ68BL8 750 aa18.11■□□□□ 0.49
VPS8-213ENST00000453056 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.11■□□□□ 0.49
VPS8-213ENST00000453056 CATIPQ7Z7H3 387 aa18.11■□□□□ 0.49
VPS8-213ENST00000453056 NPLOC4Q8TAT6 608 aa18.11■□□□□ 0.49
VPS8-213ENST00000453056 DDX11Q96FC9 970 aa18.11■□□□□ 0.49
VPS8-213ENST00000453056 RNF146Q9NTX7 359 aa18.11■□□□□ 0.49
VPS8-213ENST00000453056 RIPK3Q9Y572 518 aa18.11■□□□□ 0.49
VPS8-213ENST00000453056 RPTORQ8N122 1335 aa18.11■□□□□ 0.49
VPS8-213ENST00000453056 ZNF536O15090 1300 aa18.1■□□□□ 0.49
VPS8-213ENST00000453056 PRC1O43663 620 aa18.1■□□□□ 0.49
VPS8-213ENST00000453056 COBLO75128 1261 aa18.1■□□□□ 0.49
VPS8-213ENST00000453056 GOLGA8HP0CJ92 632 aa18.1■□□□□ 0.49
VPS8-213ENST00000453056 ALAS1P13196 640 aa18.1■□□□□ 0.49
VPS8-213ENST00000453056 ANTXR2P58335 489 aa18.1■□□□□ 0.49
VPS8-213ENST00000453056 MAP3K21Q5TCX8 1036 aa18.1■□□□□ 0.49
VPS8-213ENST00000453056 CHST3Q7LGC8 479 aa18.1■□□□□ 0.49
VPS8-213ENST00000453056 ANKRD35Q8N283 1001 aa18.1■□□□□ 0.49
VPS8-213ENST00000453056 TMEM87BQ96K49 555 aa18.1■□□□□ 0.49
VPS8-213ENST00000453056 AGBL1Q96MI9 1066 aa18.1■□□□□ 0.49
VPS8-213ENST00000453056 PAK6Q9NQU5 681 aaPredicted RBP18.1■□□□□ 0.49
VPS8-213ENST00000453056 DIS3Q9Y2L1 958 aaKnown RBP18.1■□□□□ 0.49
VPS8-213ENST00000453056 PFASO15067 1338 aa18.09■□□□□ 0.49
VPS8-213ENST00000453056 WDR19Q8NEZ3 1342 aa18.09■□□□□ 0.49
VPS8-213ENST00000453056 DHX16O60231 1041 aaKnown RBP18.09■□□□□ 0.49
VPS8-213ENST00000453056 EN2P19622 333 aaPredicted RBP18.09■□□□□ 0.49
VPS8-213ENST00000453056 GJA8P48165 433 aa18.09■□□□□ 0.49
VPS8-213ENST00000453056 SNAP25P60880 206 aa18.09■□□□□ 0.49
VPS8-213ENST00000453056 TRIM32Q13049 653 aa18.09■□□□□ 0.49
VPS8-213ENST00000453056 TRERF1Q96PN7 1200 aa18.09■□□□□ 0.49
VPS8-213ENST00000453056 MCM3APO60318 1980 aa18.09■□□□□ 0.49
VPS8-213ENST00000453056 PGK2P07205 417 aa18.08■□□□□ 0.48
VPS8-213ENST00000453056 CACNB2Q08289 660 aaPredicted RBP18.08■□□□□ 0.48
VPS8-213ENST00000453056 TSGA10IPQ3SY00 556 aa18.08■□□□□ 0.48
VPS8-213ENST00000453056 NFXL1Q6ZNB6 911 aa18.08■□□□□ 0.48
VPS8-213ENST00000453056 TMTC2Q8N394 836 aa18.08■□□□□ 0.48
VPS8-213ENST00000453056 U2AF1L4Q8WU68 220 aaKnown RBP18.08■□□□□ 0.48
VPS8-213ENST00000453056 MAML3Q96JK9 1138 aa18.08■□□□□ 0.48
VPS8-213ENST00000453056 DEFB118Q96PH6 123 aa18.08■□□□□ 0.48
VPS8-213ENST00000453056 NEK1Q96PY6 1258 aa18.08■□□□□ 0.48
VPS8-213ENST00000453056 FLRT1Q9NZU1 646 aa18.08■□□□□ 0.48
VPS8-213ENST00000453056 SH2B2O14492 632 aaPredicted RBP18.07■□□□□ 0.48
VPS8-213ENST00000453056 EPB41L2O43491 1005 aaKnown RBP18.07■□□□□ 0.48
VPS8-213ENST00000453056 DDAH1O94760 285 aa18.07■□□□□ 0.48
VPS8-213ENST00000453056 HMGB1P09429 215 aaKnown RBP18.07■□□□□ 0.48
VPS8-213ENST00000453056 GRM4Q14833 912 aa18.07■□□□□ 0.48
VPS8-213ENST00000453056 CDC37Q16543 378 aaPredicted RBP18.07■□□□□ 0.48
VPS8-213ENST00000453056 ZNF792Q3KQV3 632 aa18.07■□□□□ 0.48
VPS8-213ENST00000453056 MSL3Q8N5Y2 521 aaKnown RBP18.07■□□□□ 0.48
VPS8-213ENST00000453056 IGDCC4Q8TDY8 1250 aa18.07■□□□□ 0.48
VPS8-213ENST00000453056 UBA5Q9GZZ9 404 aa18.07■□□□□ 0.48
VPS8-213ENST00000453056 LY9Q9HBG7 655 aa18.07■□□□□ 0.48
VPS8-213ENST00000453056 CCDC69A6NI79 296 aa18.06■□□□□ 0.48
VPS8-213ENST00000453056 EIF5BO60841 1220 aaKnown RBP18.06■□□□□ 0.48
VPS8-213ENST00000453056 SGPL1O95470 568 aa18.06■□□□□ 0.48
VPS8-213ENST00000453056 CYP2C19P33261 490 aa18.06■□□□□ 0.48
VPS8-213ENST00000453056 ZNF654Q8IZM8 581 aa18.06■□□□□ 0.48
VPS8-213ENST00000453056 SHISA4Q96DD7 197 aa18.06■□□□□ 0.48
VPS8-213ENST00000453056 NRBP1Q9UHY1 535 aa18.06■□□□□ 0.48
VPS8-213ENST00000453056 FRMPD3Q5JV73 1810 aa18.06■□□□□ 0.48
VPS8-213ENST00000453056 CEP290O15078 2479 aa18.05■□□□□ 0.48
VPS8-213ENST00000453056 DNAJC25-GNG10A0A024R161 153 aa18.05■□□□□ 0.48
VPS8-213ENST00000453056 KLRF2D3W0D1 207 aa18.05■□□□□ 0.48
VPS8-213ENST00000453056 POTEB2H3BUK9 544 aa18.05■□□□□ 0.48
VPS8-213ENST00000453056 MSCO60682 206 aa18.05■□□□□ 0.48
VPS8-213ENST00000453056 TFRCP02786 760 aaKnown RBP18.05■□□□□ 0.48
VPS8-213ENST00000453056 KIF5BP33176 963 aa18.05■□□□□ 0.48
VPS8-213ENST00000453056 HSPA4P34932 840 aa18.05■□□□□ 0.48
VPS8-213ENST00000453056 LIFRP42702 1097 aa18.05■□□□□ 0.48
VPS8-213ENST00000453056 ZNF467Q7Z7K2 595 aaPredicted RBP18.05■□□□□ 0.48
VPS8-213ENST00000453056 RASEFQ8IZ41 740 aa18.05■□□□□ 0.48
VPS8-213ENST00000453056 ADGRF4Q8IZF3 695 aa18.05■□□□□ 0.48
VPS8-213ENST00000453056 CTCFLQ8NI51 663 aaPredicted RBP18.05■□□□□ 0.48
VPS8-213ENST00000453056 NUP133Q8WUM0 1156 aa18.05■□□□□ 0.48
VPS8-213ENST00000453056 MAP3K14Q99558 947 aa18.05■□□□□ 0.48
VPS8-213ENST00000453056 TINF2Q9BSI4 451 aa18.05■□□□□ 0.48
VPS8-213ENST00000453056 CPVLQ9H3G5 476 aa18.05■□□□□ 0.48
VPS8-213ENST00000453056 SENP2Q9HC62 589 aa18.05■□□□□ 0.48
VPS8-213ENST00000453056 A1CFQ9NQ94 594 aaKnown RBP18.05■□□□□ 0.48
VPS8-213ENST00000453056 MKI67P46013 3256 aaKnown RBP18.04■□□□□ 0.48
VPS8-213ENST00000453056 SYNGAP1Q96PV0 1343 aa18.04■□□□□ 0.48
VPS8-213ENST00000453056 PALM3A6NDB9 673 aaPredicted RBP18.04■□□□□ 0.48
VPS8-213ENST00000453056 FARP2O94887 1054 aaPredicted RBP18.04■□□□□ 0.48
VPS8-213ENST00000453056 CALM1P0DP23 149 aa18.04■□□□□ 0.48
VPS8-213ENST00000453056 CALM2P0DP24 149 aa18.04■□□□□ 0.48
VPS8-213ENST00000453056 CALM3P0DP25 149 aa18.04■□□□□ 0.48
VPS8-213ENST00000453056 CYBAP13498 195 aa18.04■□□□□ 0.48
VPS8-213ENST00000453056 CNGA1P29973 690 aa18.04■□□□□ 0.48
VPS8-213ENST00000453056 CCND3P30281 292 aaPredicted RBP18.04■□□□□ 0.48
VPS8-213ENST00000453056 TROAPQ12815 778 aa18.04■□□□□ 0.48
VPS8-213ENST00000453056 NSMFQ6X4W1 530 aa18.04■□□□□ 0.48
VPS8-213ENST00000453056 DHX32Q7L7V1 743 aaKnown RBP18.04■□□□□ 0.48
VPS8-213ENST00000453056 KCNB2Q92953 911 aa18.04■□□□□ 0.48
VPS8-213ENST00000453056 CRISPLD2Q9H0B8 497 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms