RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 RBL2Q08999 1139 aa12.79□□□□□ -0.36
CLDN4-202ENST00000431918 CNGA4Q8IV77 575 aa12.79□□□□□ -0.36
CLDN4-202ENST00000431918 SLF1Q9BQI6 1058 aa12.79□□□□□ -0.36
CLDN4-202ENST00000431918 LUC7L2Q9Y383 392 aaKnown RBP12.79□□□□□ -0.36
CLDN4-202ENST00000431918 FAM205AQ6ZU69 1335 aa12.79□□□□□ -0.36
CLDN4-202ENST00000431918 A0A087X0B3 334 aa12.79□□□□□ -0.36
CLDN4-202ENST00000431918 RBM26Q5T8P6 1007 aaKnown RBP12.79□□□□□ -0.36
CLDN4-202ENST00000431918 E4F1Q66K89 784 aaPredicted RBP12.79□□□□□ -0.36
CLDN4-202ENST00000431918 TMCO3Q6UWJ1 677 aa12.79□□□□□ -0.36
CLDN4-202ENST00000431918 FNBP4Q8N3X1 1017 aaPredicted RBP12.79□□□□□ -0.36
CLDN4-202ENST00000431918 DISC1Q9NRI5 854 aa12.79□□□□□ -0.36
CLDN4-202ENST00000431918 NUP98P52948 1817 aa12.79□□□□□ -0.36
CLDN4-202ENST00000431918 LRP6O75581 1613 aa12.79□□□□□ -0.36
CLDN4-202ENST00000431918 SOWAHDA6NJG2 315 aa12.79□□□□□ -0.36
CLDN4-202ENST00000431918 ERO1AQ96HE7 468 aa12.79□□□□□ -0.36
CLDN4-202ENST00000431918 FEZ1Q99689 392 aa12.79□□□□□ -0.36
CLDN4-202ENST00000431918 TSG101Q99816 390 aa12.79□□□□□ -0.36
CLDN4-202ENST00000431918 COA1Q9GZY4 146 aa12.79□□□□□ -0.36
CLDN4-202ENST00000431918 SLURP2P0DP57 97 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 SF3B2Q13435 895 aaKnown RBP12.78□□□□□ -0.36
CLDN4-202ENST00000431918 CERKLQ49MI3 558 aaPredicted RBP12.78□□□□□ -0.36
CLDN4-202ENST00000431918 TDRD12Q587J7 1177 aaKnown RBP12.78□□□□□ -0.36
CLDN4-202ENST00000431918 ZNF397Q8NF99 534 aaPredicted RBP12.78□□□□□ -0.36
CLDN4-202ENST00000431918 NEDD1Q8NHV4 660 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 DRC1Q96MC2 740 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 BARHL2Q9NY43 387 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 PCDHA6Q9UN73 950 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 PCDHA8Q9Y5H6 950 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 TTLL1O95922 423 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 TM4SF1P30408 202 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 RCSD1Q6JBY9 416 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 TEX2Q8IWB9 1127 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 NOC4LQ9BVI4 516 aaKnown RBP12.78□□□□□ -0.36
CLDN4-202ENST00000431918 SPATA31A6Q5VVP1 1343 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 SPDYE3A6NKU9 549 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 PPIP5K2O43314 1243 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 BMP6P22004 513 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 TTBK2Q6IQ55 1244 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 OGFOD1Q8N543 542 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 CUL5Q93034 780 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 RTFDC1Q9BY42 306 aaPredicted RBP12.78□□□□□ -0.36
CLDN4-202ENST00000431918 PSTPIP2Q9H939 334 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 CRYBG1Q9Y4K1 1723 aa12.78□□□□□ -0.36
CLDN4-202ENST00000431918 PSDA5PKW4 1024 aaPredicted RBP12.77□□□□□ -0.36
CLDN4-202ENST00000431918 COPB1P53618 953 aaKnown RBP12.77□□□□□ -0.36
CLDN4-202ENST00000431918 IRX5P78411 483 aaPredicted RBP12.77□□□□□ -0.36
CLDN4-202ENST00000431918 KMT5BQ4FZB7 885 aa12.77□□□□□ -0.36
CLDN4-202ENST00000431918 MAD2L2Q9UI95 211 aa12.77□□□□□ -0.36
CLDN4-202ENST00000431918 CLRN2A0PK11 232 aa12.77□□□□□ -0.36
CLDN4-202ENST00000431918 TCP10L2B9ZVM9 353 aa12.77□□□□□ -0.36
CLDN4-202ENST00000431918 TCERG1LQ5VWI1 586 aa12.77□□□□□ -0.36
CLDN4-202ENST00000431918 NELFCDQ8IXH7 590 aa12.77□□□□□ -0.36
CLDN4-202ENST00000431918 ITGB4P16144 1822 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 PRCPP42785 496 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 ARID5AQ03989 594 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 DDR1Q08345 913 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 MTF1Q14872 753 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 SPA17Q15506 151 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 GALNT17Q6IS24 598 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 TYW1BQ6NUM6 668 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 FAM114A1Q8IWE2 563 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 CALCOCO1Q9P1Z2 691 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 PCDHA1Q9Y5I3 950 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 STRCQ7RTU9 1775 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 GPR75-ASB3A0A0A6YYF3 556 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 POTEMA6NI47 508 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 MYO1BO43795 1136 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 NPR1P16066 1061 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 CD44P16070 742 aaKnown RBP12.77□□□□□ -0.37
CLDN4-202ENST00000431918 KRT31Q15323 416 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 SLFN13Q68D06 897 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 TOGARAM2Q6ZUX3 1019 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 HPS3Q969F9 1004 aa12.77□□□□□ -0.37
CLDN4-202ENST00000431918 TJP1Q07157 1748 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 DOT1LQ8TEK3 1739 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 TOGARAM1Q9Y4F4 1720 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 COL1A1P02452 1464 aaPredicted RBP12.76□□□□□ -0.37
CLDN4-202ENST00000431918 CACNB1Q02641 598 aaPredicted RBP12.76□□□□□ -0.37
CLDN4-202ENST00000431918 ZNF658Q5TYW1 1059 aaPredicted RBP12.76□□□□□ -0.37
CLDN4-202ENST00000431918 ARL6IP4Q66PJ3 421 aaKnown RBP12.76□□□□□ -0.37
CLDN4-202ENST00000431918 POTEDQ86YR6 584 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 BICDL2A1A5D9 508 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 TRAF5O00463 557 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 CHRNA5P30532 468 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 ICA1Q05084 483 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 MCM6Q14566 821 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 LRRC41Q15345 812 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 SPEF2Q9C093 1822 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 STXBP3O00186 592 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 AKR1B10O60218 316 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 PPP4CP60510 307 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 GJA10Q969M2 543 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 PKD2L1Q9P0L9 805 aa12.76□□□□□ -0.37
CLDN4-202ENST00000431918 B4DLN1 442 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 USP17L10C9JJH3 530 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 POLR3GO15318 223 aaPredicted RBP12.75□□□□□ -0.37
CLDN4-202ENST00000431918 CHMP2AO43633 222 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 CYTH3O43739 400 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 STX10O60499 249 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 TDP2O95551 362 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms