RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 ZNF236Q9UL36 1845 aa21.08■□□□□ 0.96
HERC3-205ENST00000426683 PRKAR2AP13861 404 aaKnown RBP21.07■□□□□ 0.96
HERC3-205ENST00000426683 COL9A3Q14050 684 aaPredicted RBP21.07■□□□□ 0.96
HERC3-205ENST00000426683 MFSD14CQ5VZR4 134 aa21.07■□□□□ 0.96
HERC3-205ENST00000426683 RASEFQ8IZ41 740 aa21.07■□□□□ 0.96
HERC3-205ENST00000426683 RNF146Q9NTX7 359 aa21.07■□□□□ 0.96
HERC3-205ENST00000426683 CCPG1Q9ULG6 757 aa21.07■□□□□ 0.96
HERC3-205ENST00000426683 CENPFP49454 3210 aa21.06■□□□□ 0.96
HERC3-205ENST00000426683 RPTORQ8N122 1335 aa21.06■□□□□ 0.96
HERC3-205ENST00000426683 ICAM1P05362 532 aa21.06■□□□□ 0.96
HERC3-205ENST00000426683 GJB1P08034 283 aa21.06■□□□□ 0.96
HERC3-205ENST00000426683 ALAS1P13196 640 aa21.06■□□□□ 0.96
HERC3-205ENST00000426683 CACNB2Q08289 660 aaPredicted RBP21.06■□□□□ 0.96
HERC3-205ENST00000426683 TKFCQ3LXA3 575 aa21.06■□□□□ 0.96
HERC3-205ENST00000426683 TSGA10IPQ3SY00 556 aa21.06■□□□□ 0.96
HERC3-205ENST00000426683 MAP3K21Q5TCX8 1036 aa21.06■□□□□ 0.96
HERC3-205ENST00000426683 DDX11Q96FC9 970 aa21.06■□□□□ 0.96
HERC3-205ENST00000426683 NEK1Q96PY6 1258 aa21.06■□□□□ 0.96
HERC3-205ENST00000426683 MTA3Q9BTC8 594 aa21.06■□□□□ 0.96
HERC3-205ENST00000426683 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.06■□□□□ 0.96
HERC3-205ENST00000426683 ACAD9Q9H845 621 aa21.06■□□□□ 0.96
HERC3-205ENST00000426683 HMX1Q9NP08 348 aaPredicted RBP21.06■□□□□ 0.96
HERC3-205ENST00000426683 GPHNQ9NQX3 736 aaPredicted RBP21.06■□□□□ 0.96
HERC3-205ENST00000426683 SH2B2O14492 632 aaPredicted RBP21.05■□□□□ 0.96
HERC3-205ENST00000426683 TAL1P17542 331 aaPredicted RBP21.05■□□□□ 0.96
HERC3-205ENST00000426683 ZNF792Q3KQV3 632 aa21.05■□□□□ 0.96
HERC3-205ENST00000426683 OLFML2BQ68BL8 750 aa21.05■□□□□ 0.96
HERC3-205ENST00000426683 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.05■□□□□ 0.96
HERC3-205ENST00000426683 ANKRD35Q8N283 1001 aa21.05■□□□□ 0.96
HERC3-205ENST00000426683 STAG2Q8N3U4 1231 aa21.05■□□□□ 0.96
HERC3-205ENST00000426683 MAML3Q96JK9 1138 aa21.05■□□□□ 0.96
HERC3-205ENST00000426683 TMEM87BQ96K49 555 aa21.05■□□□□ 0.96
HERC3-205ENST00000426683 TRERF1Q96PN7 1200 aa21.05■□□□□ 0.96
HERC3-205ENST00000426683 LY9Q9HBG7 655 aa21.05■□□□□ 0.96
HERC3-205ENST00000426683 PAK6Q9NQU5 681 aaPredicted RBP21.05■□□□□ 0.96
HERC3-205ENST00000426683 DHX16O60231 1041 aaKnown RBP21.04■□□□□ 0.96
HERC3-205ENST00000426683 CYP2C19P33261 490 aa21.04■□□□□ 0.96
HERC3-205ENST00000426683 HSPA4P34932 840 aa21.04■□□□□ 0.96
HERC3-205ENST00000426683 GJA8P48165 433 aa21.04■□□□□ 0.96
HERC3-205ENST00000426683 KRT32Q14532 448 aa21.04■□□□□ 0.96
HERC3-205ENST00000426683 GRM4Q14833 912 aa21.04■□□□□ 0.96
HERC3-205ENST00000426683 ADCK5Q3MIX3 580 aa21.04■□□□□ 0.96
HERC3-205ENST00000426683 CATIPQ7Z7H3 387 aa21.04■□□□□ 0.96
HERC3-205ENST00000426683 ADGRF4Q8IZF3 695 aa21.04■□□□□ 0.96
HERC3-205ENST00000426683 U2AF1L4Q8WU68 220 aaKnown RBP21.04■□□□□ 0.96
HERC3-205ENST00000426683 DEFB118Q96PH6 123 aa21.04■□□□□ 0.96
HERC3-205ENST00000426683 MAD2L2Q9UI95 211 aa21.04■□□□□ 0.96
HERC3-205ENST00000426683 DIS3Q9Y2L1 958 aaKnown RBP21.04■□□□□ 0.96
HERC3-205ENST00000426683 SGPL1O95470 568 aa21.03■□□□□ 0.96
HERC3-205ENST00000426683 IGHA2P01877 340 aa21.03■□□□□ 0.96
HERC3-205ENST00000426683 TROAPQ12815 778 aa21.03■□□□□ 0.96
HERC3-205ENST00000426683 MUM1L1Q5H9M0 696 aa21.03■□□□□ 0.96
HERC3-205ENST00000426683 NFXL1Q6ZNB6 911 aa21.03■□□□□ 0.96
HERC3-205ENST00000426683 KCNB2Q92953 911 aa21.03■□□□□ 0.96
HERC3-205ENST00000426683 LRRC2Q9BYS8 371 aa21.03■□□□□ 0.96
HERC3-205ENST00000426683 PNMA2Q9UL42 364 aa21.03■□□□□ 0.96
HERC3-205ENST00000426683 RBBP6Q7Z6E9 1792 aaKnown RBP21.02■□□□□ 0.96
HERC3-205ENST00000426683 DNAJC25-GNG10A0A024R161 153 aa21.02■□□□□ 0.96
HERC3-205ENST00000426683 PALM3A6NDB9 673 aaPredicted RBP21.02■□□□□ 0.96
HERC3-205ENST00000426683 KLRF2D3W0D1 207 aa21.02■□□□□ 0.96
HERC3-205ENST00000426683 CCND3P30281 292 aaPredicted RBP21.02■□□□□ 0.96
HERC3-205ENST00000426683 MLLT1Q03111 559 aaPredicted RBP21.02■□□□□ 0.96
HERC3-205ENST00000426683 CDC37Q16543 378 aaPredicted RBP21.02■□□□□ 0.96
HERC3-205ENST00000426683 ZNF654Q8IZM8 581 aa21.02■□□□□ 0.96
HERC3-205ENST00000426683 TMTC2Q8N394 836 aa21.02■□□□□ 0.96
HERC3-205ENST00000426683 NUP133Q8WUM0 1156 aa21.02■□□□□ 0.96
HERC3-205ENST00000426683 SHISA4Q96DD7 197 aa21.02■□□□□ 0.96
HERC3-205ENST00000426683 VAT1LQ9HCJ6 419 aa21.02■□□□□ 0.96
HERC3-205ENST00000426683 A1CFQ9NQ94 594 aaKnown RBP21.02■□□□□ 0.96
HERC3-205ENST00000426683 WDR19Q8NEZ3 1342 aa21.02■□□□□ 0.95
HERC3-205ENST00000426683 CCDC69A6NI79 296 aa21.01■□□□□ 0.95
HERC3-205ENST00000426683 EPB41L2O43491 1005 aaKnown RBP21.01■□□□□ 0.95
HERC3-205ENST00000426683 LIFRP42702 1097 aa21.01■□□□□ 0.95
HERC3-205ENST00000426683 DHX32Q7L7V1 743 aaKnown RBP21.01■□□□□ 0.95
HERC3-205ENST00000426683 TCEANC2Q96MN5 208 aa21.01■□□□□ 0.95
HERC3-205ENST00000426683 MYL10Q9BUA6 226 aa21.01■□□□□ 0.95
HERC3-205ENST00000426683 JMJD4Q9H9V9 463 aa21.01■□□□□ 0.95
HERC3-205ENST00000426683 SNX14Q9Y5W7 946 aa21.01■□□□□ 0.95
HERC3-205ENST00000426683 DDAH1O94760 285 aa21■□□□□ 0.95
HERC3-205ENST00000426683 TFRCP02786 760 aaKnown RBP21■□□□□ 0.95
HERC3-205ENST00000426683 EXOSC10Q01780 885 aaKnown RBP21■□□□□ 0.95
HERC3-205ENST00000426683 NSMFQ6X4W1 530 aa21■□□□□ 0.95
HERC3-205ENST00000426683 TINF2Q9BSI4 451 aa21■□□□□ 0.95
HERC3-205ENST00000426683 POTEB2H3BUK9 544 aa20.99■□□□□ 0.95
HERC3-205ENST00000426683 HMGB1P09429 215 aaKnown RBP20.99■□□□□ 0.95
HERC3-205ENST00000426683 CYBAP13498 195 aa20.99■□□□□ 0.95
HERC3-205ENST00000426683 QRICH1Q2TAL8 776 aa20.99■□□□□ 0.95
HERC3-205ENST00000426683 USH1GQ495M9 461 aa20.99■□□□□ 0.95
HERC3-205ENST00000426683 TRPV1Q8NER1 839 aa20.99■□□□□ 0.95
HERC3-205ENST00000426683 JAKMIP1Q96N16 626 aaKnown RBP20.99■□□□□ 0.95
HERC3-205ENST00000426683 USP26Q9BXU7 913 aa20.99■□□□□ 0.95
HERC3-205ENST00000426683 CRISPLD2Q9H0B8 497 aa20.99■□□□□ 0.95
HERC3-205ENST00000426683 PFASO15067 1338 aa20.99■□□□□ 0.95
HERC3-205ENST00000426683 NFIBO00712 420 aa20.98■□□□□ 0.95
HERC3-205ENST00000426683 CNGA1P29973 690 aa20.98■□□□□ 0.95
HERC3-205ENST00000426683 PRAMEF19Q5SWL8 479 aa20.98■□□□□ 0.95
HERC3-205ENST00000426683 CTCFLQ8NI51 663 aaPredicted RBP20.98■□□□□ 0.95
HERC3-205ENST00000426683 CLEC4DQ8WXI8 215 aa20.98■□□□□ 0.95
HERC3-205ENST00000426683 MAP3K14Q99558 947 aa20.98■□□□□ 0.95
HERC3-205ENST00000426683 CYP39A1Q9NYL5 469 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms