RNA–Protein interactions for RNA: ENST00000417578.5

SNHG17-203, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2 BASIC

Gene SNHG17, Length 880 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-203ENST00000417578 CHST3Q7LGC8 479 aa18.91■□□□□ 0.62
SNHG17-203ENST00000417578 NPLOC4Q8TAT6 608 aa18.91■□□□□ 0.62
SNHG17-203ENST00000417578 DDX11Q96FC9 970 aa18.91■□□□□ 0.62
SNHG17-203ENST00000417578 DIS3Q9Y2L1 958 aaKnown RBP18.91■□□□□ 0.62
SNHG17-203ENST00000417578 ZNF536O15090 1300 aa18.91■□□□□ 0.62
SNHG17-203ENST00000417578 ICAM1P05362 532 aa18.9■□□□□ 0.62
SNHG17-203ENST00000417578 GOLGA8HP0CJ92 632 aa18.9■□□□□ 0.62
SNHG17-203ENST00000417578 PRKAR2AP13861 404 aaKnown RBP18.9■□□□□ 0.62
SNHG17-203ENST00000417578 TRIM32Q13049 653 aa18.9■□□□□ 0.62
SNHG17-203ENST00000417578 KRT32Q14532 448 aa18.9■□□□□ 0.62
SNHG17-203ENST00000417578 MAP3K21Q5TCX8 1036 aa18.9■□□□□ 0.62
SNHG17-203ENST00000417578 ANKRD35Q8N283 1001 aa18.9■□□□□ 0.62
SNHG17-203ENST00000417578 TMTC2Q8N394 836 aa18.9■□□□□ 0.62
SNHG17-203ENST00000417578 IGDCC4Q8TDY8 1250 aa18.9■□□□□ 0.62
SNHG17-203ENST00000417578 TMEM87BQ96K49 555 aa18.9■□□□□ 0.62
SNHG17-203ENST00000417578 AGBL1Q96MI9 1066 aa18.9■□□□□ 0.62
SNHG17-203ENST00000417578 ACAD9Q9H845 621 aa18.9■□□□□ 0.62
SNHG17-203ENST00000417578 PLXNA1Q9UIW2 1896 aa18.9■□□□□ 0.62
SNHG17-203ENST00000417578 EPB41L2O43491 1005 aaKnown RBP18.89■□□□□ 0.61
SNHG17-203ENST00000417578 PRC1O43663 620 aa18.89■□□□□ 0.61
SNHG17-203ENST00000417578 EN2P19622 333 aaPredicted RBP18.89■□□□□ 0.61
SNHG17-203ENST00000417578 GJA8P48165 433 aa18.89■□□□□ 0.61
SNHG17-203ENST00000417578 ANTXR2P58335 489 aa18.89■□□□□ 0.61
SNHG17-203ENST00000417578 SNAP25P60880 206 aa18.89■□□□□ 0.61
SNHG17-203ENST00000417578 CACNB2Q08289 660 aaPredicted RBP18.89■□□□□ 0.61
SNHG17-203ENST00000417578 CATIPQ7Z7H3 387 aa18.89■□□□□ 0.61
SNHG17-203ENST00000417578 TRERF1Q96PN7 1200 aa18.89■□□□□ 0.61
SNHG17-203ENST00000417578 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.89■□□□□ 0.612e-6■■□□□ 13.6
SNHG17-203ENST00000417578 PAK6Q9NQU5 681 aaPredicted RBP18.89■□□□□ 0.61
SNHG17-203ENST00000417578 FLRT1Q9NZU1 646 aa18.89■□□□□ 0.61
SNHG17-203ENST00000417578 CCPG1Q9ULG6 757 aa18.89■□□□□ 0.61
SNHG17-203ENST00000417578 SGPL1O95470 568 aa18.88■□□□□ 0.61
SNHG17-203ENST00000417578 PGK2P07205 417 aa18.88■□□□□ 0.61
SNHG17-203ENST00000417578 ALAS1P13196 640 aa18.88■□□□□ 0.61
SNHG17-203ENST00000417578 ZNF792Q3KQV3 632 aa18.88■□□□□ 0.61
SNHG17-203ENST00000417578 U2AF1L4Q8WU68 220 aaKnown RBP18.88■□□□□ 0.61
SNHG17-203ENST00000417578 MAML3Q96JK9 1138 aa18.88■□□□□ 0.61
SNHG17-203ENST00000417578 NEK1Q96PY6 1258 aa18.88■□□□□ 0.61
SNHG17-203ENST00000417578 UBA5Q9GZZ9 404 aa18.88■□□□□ 0.61
SNHG17-203ENST00000417578 HOMER2Q9NSB8 354 aa18.88■□□□□ 0.61
SNHG17-203ENST00000417578 RNF146Q9NTX7 359 aa18.88■□□□□ 0.61
SNHG17-203ENST00000417578 DEFB118Q96PH6 123 aa18.87■□□□□ 0.61
SNHG17-203ENST00000417578 WDR19Q8NEZ3 1342 aa18.86■□□□□ 0.61
SNHG17-203ENST00000417578 KLRF2D3W0D1 207 aa18.86■□□□□ 0.61
SNHG17-203ENST00000417578 DHX16O60231 1041 aaKnown RBP18.86■□□□□ 0.61
SNHG17-203ENST00000417578 IGHA2P01877 340 aa18.86■□□□□ 0.61
SNHG17-203ENST00000417578 TFRCP02786 760 aaKnown RBP18.86■□□□□ 0.61
SNHG17-203ENST00000417578 HMGB1P09429 215 aaKnown RBP18.86■□□□□ 0.61
SNHG17-203ENST00000417578 CYP2C19P33261 490 aa18.86■□□□□ 0.61
SNHG17-203ENST00000417578 HSPA4P34932 840 aa18.86■□□□□ 0.61
SNHG17-203ENST00000417578 LIFRP42702 1097 aa18.86■□□□□ 0.61
SNHG17-203ENST00000417578 GRM4Q14833 912 aa18.86■□□□□ 0.61
SNHG17-203ENST00000417578 ADGRF4Q8IZF3 695 aa18.86■□□□□ 0.61
SNHG17-203ENST00000417578 KCNB2Q92953 911 aa18.86■□□□□ 0.61
SNHG17-203ENST00000417578 LY9Q9HBG7 655 aa18.86■□□□□ 0.61
SNHG17-203ENST00000417578 MAD2L2Q9UI95 211 aa18.86■□□□□ 0.61
SNHG17-203ENST00000417578 SMCHD1A6NHR9 2005 aa18.86■□□□□ 0.61
SNHG17-203ENST00000417578 PFASO15067 1338 aa18.85■□□□□ 0.61
SNHG17-203ENST00000417578 MYH6P13533 1939 aa18.85■□□□□ 0.61
SNHG17-203ENST00000417578 DNAJC25-GNG10A0A024R161 153 aa18.85■□□□□ 0.61
SNHG17-203ENST00000417578 PALM3A6NDB9 673 aaPredicted RBP18.85■□□□□ 0.61
SNHG17-203ENST00000417578 CCDC69A6NI79 296 aa18.85■□□□□ 0.61
SNHG17-203ENST00000417578 SH2B2O14492 632 aaPredicted RBP18.85■□□□□ 0.61
SNHG17-203ENST00000417578 TROAPQ12815 778 aa18.85■□□□□ 0.61
SNHG17-203ENST00000417578 NFXL1Q6ZNB6 911 aa18.85■□□□□ 0.61
SNHG17-203ENST00000417578 DHX32Q7L7V1 743 aaKnown RBP18.85■□□□□ 0.61
SNHG17-203ENST00000417578 RASEFQ8IZ41 740 aa18.85■□□□□ 0.61
SNHG17-203ENST00000417578 MSL3Q8N5Y2 521 aaKnown RBP18.85■□□□□ 0.61
SNHG17-203ENST00000417578 MAP3K14Q99558 947 aa18.85■□□□□ 0.61
SNHG17-203ENST00000417578 TINF2Q9BSI4 451 aa18.85■□□□□ 0.61
SNHG17-203ENST00000417578 CPVLQ9H3G5 476 aa18.85■□□□□ 0.61
SNHG17-203ENST00000417578 SENP2Q9HC62 589 aa18.85■□□□□ 0.61
SNHG17-203ENST00000417578 POTEB2H3BUK9 544 aa18.84■□□□□ 0.61
SNHG17-203ENST00000417578 EIF5BO60841 1220 aaKnown RBP18.84■□□□□ 0.61
SNHG17-203ENST00000417578 CDC37Q16543 378 aaPredicted RBP18.84■□□□□ 0.61
SNHG17-203ENST00000417578 ZNF467Q7Z7K2 595 aaPredicted RBP18.84■□□□□ 0.61
SNHG17-203ENST00000417578 STAG2Q8N3U4 1231 aa18.84■□□□□ 0.61
SNHG17-203ENST00000417578 CRISPLD2Q9H0B8 497 aa18.84■□□□□ 0.61
SNHG17-203ENST00000417578 VAT1LQ9HCJ6 419 aa18.84■□□□□ 0.61
SNHG17-203ENST00000417578 A1CFQ9NQ94 594 aaKnown RBP18.84■□□□□ 0.61
SNHG17-203ENST00000417578 NRBP1Q9UHY1 535 aa18.84■□□□□ 0.61
SNHG17-203ENST00000417578 MSCO60682 206 aa18.83■□□□□ 0.6
SNHG17-203ENST00000417578 DDAH1O94760 285 aa18.83■□□□□ 0.6
SNHG17-203ENST00000417578 CALM1P0DP23 149 aa18.83■□□□□ 0.6
SNHG17-203ENST00000417578 CALM2P0DP24 149 aa18.83■□□□□ 0.6
SNHG17-203ENST00000417578 CALM3P0DP25 149 aa18.83■□□□□ 0.6
SNHG17-203ENST00000417578 CCND3P30281 292 aaPredicted RBP18.83■□□□□ 0.6
SNHG17-203ENST00000417578 KIF5BP33176 963 aa18.83■□□□□ 0.6
SNHG17-203ENST00000417578 EXOSC10Q01780 885 aaKnown RBP18.83■□□□□ 0.6
SNHG17-203ENST00000417578 ADCK5Q3MIX3 580 aa18.83■□□□□ 0.6
SNHG17-203ENST00000417578 MUM1L1Q5H9M0 696 aa18.83■□□□□ 0.6
SNHG17-203ENST00000417578 ZNF654Q8IZM8 581 aa18.83■□□□□ 0.6
SNHG17-203ENST00000417578 CTCFLQ8NI51 663 aaPredicted RBP18.83■□□□□ 0.6
SNHG17-203ENST00000417578 NUP133Q8WUM0 1156 aa18.83■□□□□ 0.6
SNHG17-203ENST00000417578 SHISA4Q96DD7 197 aa18.83■□□□□ 0.6
SNHG17-203ENST00000417578 JMJD4Q9H9V9 463 aa18.83■□□□□ 0.6
SNHG17-203ENST00000417578 BRCA2P51587 3418 aa18.83■□□□□ 0.6
SNHG17-203ENST00000417578 CYBAP13498 195 aa18.82■□□□□ 0.6
SNHG17-203ENST00000417578 CNGA1P29973 690 aa18.82■□□□□ 0.6
SNHG17-203ENST00000417578 MAMDC4Q6UXC1 1216 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms