RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 TAL1P17542 331 aaPredicted RBP27.82■■■□□ 2.04
UBE2E3-202ENST00000410062 CASTP20810 708 aaKnown RBP27.82■■■□□ 2.04
UBE2E3-202ENST00000410062 ADORA2AP29274 412 aa27.82■■■□□ 2.04
UBE2E3-202ENST00000410062 RGS2P41220 211 aa27.82■■■□□ 2.04
UBE2E3-202ENST00000410062 ADGRF4Q8IZF3 695 aa27.82■■■□□ 2.04
UBE2E3-202ENST00000410062 FCER1AP12319 257 aa27.81■■■□□ 2.04
UBE2E3-202ENST00000410062 PSMA5P28066 241 aa27.81■■■□□ 2.04
UBE2E3-202ENST00000410062 RAB11FIP4Q86YS3 637 aa27.81■■■□□ 2.04
UBE2E3-202ENST00000410062 SLAIN1Q8ND83 568 aa27.81■■■□□ 2.04
UBE2E3-202ENST00000410062 MMP19Q99542 508 aa27.81■■■□□ 2.04
UBE2E3-202ENST00000410062 VAT1LQ9HCJ6 419 aa27.81■■■□□ 2.04
UBE2E3-202ENST00000410062 CCDC85CA6NKD9 419 aa27.8■■■□□ 2.04
UBE2E3-202ENST00000410062 DHX16O60231 1041 aaKnown RBP27.8■■■□□ 2.04
UBE2E3-202ENST00000410062 EIF5BO60841 1220 aaKnown RBP27.8■■■□□ 2.04
UBE2E3-202ENST00000410062 DDAH1O94760 285 aa27.8■■■□□ 2.04
UBE2E3-202ENST00000410062 ICAM1P05362 532 aa27.8■■■□□ 2.04
UBE2E3-202ENST00000410062 NBPF11Q86T75 865 aa27.8■■■□□ 2.04
UBE2E3-202ENST00000410062 PXYLP1Q8TE99 480 aa27.8■■■□□ 2.04
UBE2E3-202ENST00000410062 ARMC5Q96C12 935 aa27.8■■■□□ 2.04
UBE2E3-202ENST00000410062 CCPG1Q9ULG6 757 aa27.8■■■□□ 2.04
UBE2E3-202ENST00000410062 SLC12A7Q9Y666 1083 aa27.8■■■□□ 2.04
UBE2E3-202ENST00000410062 BRCA2P51587 3418 aa27.79■■■□□ 2.04
UBE2E3-202ENST00000410062 MYCP01106 439 aaPredicted RBP27.79■■■□□ 2.04
UBE2E3-202ENST00000410062 ALAS1P13196 640 aa27.79■■■□□ 2.04
UBE2E3-202ENST00000410062 RXRAP19793 462 aa27.79■■■□□ 2.04
UBE2E3-202ENST00000410062 RPS6KB1P23443 525 aa27.79■■■□□ 2.04
UBE2E3-202ENST00000410062 SGMS1Q86VZ5 419 aa27.79■■■□□ 2.04
UBE2E3-202ENST00000410062 ABRAQ8N0Z2 381 aa27.79■■■□□ 2.04
UBE2E3-202ENST00000410062 APBA2Q99767 749 aa27.79■■■□□ 2.04
UBE2E3-202ENST00000410062 BIN2Q9UBW5 565 aaPredicted RBP27.79■■■□□ 2.04
UBE2E3-202ENST00000410062 SMCHD1A6NHR9 2005 aa27.79■■■□□ 2.04
UBE2E3-202ENST00000410062 ZNFX1Q9P2E3 1918 aaKnown RBP27.78■■■□□ 2.04
UBE2E3-202ENST00000410062 XRCC5P13010 732 aaKnown RBP27.78■■■□□ 2.04
UBE2E3-202ENST00000410062 FGD1P98174 961 aa27.78■■■□□ 2.04
UBE2E3-202ENST00000410062 KCTD2Q14681 263 aa27.78■■■□□ 2.04
UBE2E3-202ENST00000410062 CCL14Q16627 93 aa27.78■■■□□ 2.04
UBE2E3-202ENST00000410062 Q6ZUG5 572 aa27.78■■■□□ 2.04
UBE2E3-202ENST00000410062 DPP9Q86TI2 863 aa27.78■■■□□ 2.04
UBE2E3-202ENST00000410062 CCDC144CPQ8IYA2 1237 aa27.78■■■□□ 2.04
UBE2E3-202ENST00000410062 ZNF333Q96JL9 665 aa27.78■■■□□ 2.04
UBE2E3-202ENST00000410062 RNF146Q9NTX7 359 aa27.78■■■□□ 2.04
UBE2E3-202ENST00000410062 ZNF236Q9UL36 1845 aa27.78■■■□□ 2.04
UBE2E3-202ENST00000410062 COBLO75128 1261 aa27.77■■■□□ 2.04
UBE2E3-202ENST00000410062 CDC37Q16543 378 aaPredicted RBP27.77■■■□□ 2.04
UBE2E3-202ENST00000410062 CHST13Q8NET6 341 aa27.77■■■□□ 2.04
UBE2E3-202ENST00000410062 CTCFLQ8NI51 663 aaPredicted RBP27.77■■■□□ 2.04
UBE2E3-202ENST00000410062 NPLOC4Q8TAT6 608 aa27.77■■■□□ 2.04
UBE2E3-202ENST00000410062 TRIB2Q92519 343 aa27.77■■■□□ 2.04
UBE2E3-202ENST00000410062 TRERF1Q96PN7 1200 aa27.77■■■□□ 2.04
UBE2E3-202ENST00000410062 JMJD4Q9H9V9 463 aa27.77■■■□□ 2.04
UBE2E3-202ENST00000410062 ZSWIM6Q9HCJ5 1215 aa27.77■■■□□ 2.04
UBE2E3-202ENST00000410062 BRPF3Q9ULD4 1205 aa27.77■■■□□ 2.04
UBE2E3-202ENST00000410062 PGK2P07205 417 aa27.77■■■□□ 2.04
UBE2E3-202ENST00000410062 MAP3K14Q99558 947 aa27.77■■■□□ 2.04
UBE2E3-202ENST00000410062 SLC35G1Q2M3R5 365 aa27.76■■■□□ 2.03
UBE2E3-202ENST00000410062 RUFY3Q7L099 469 aa27.76■■■□□ 2.03
UBE2E3-202ENST00000410062 MICU3Q86XE3 530 aa27.76■■■□□ 2.03
UBE2E3-202ENST00000410062 ACAD9Q9H845 621 aa27.76■■■□□ 2.03
UBE2E3-202ENST00000410062 FBXO40Q9UH90 709 aa27.76■■■□□ 2.03
UBE2E3-202ENST00000410062 CAPN15O75808 1086 aa27.75■■■□□ 2.03
UBE2E3-202ENST00000410062 INHAP05111 366 aa27.75■■■□□ 2.03
UBE2E3-202ENST00000410062 HOXC6P09630 235 aa27.75■■■□□ 2.03
UBE2E3-202ENST00000410062 CALM1P0DP23 149 aa27.75■■■□□ 2.03
UBE2E3-202ENST00000410062 CALM2P0DP24 149 aa27.75■■■□□ 2.03
UBE2E3-202ENST00000410062 CALM3P0DP25 149 aa27.75■■■□□ 2.03
UBE2E3-202ENST00000410062 TKFCQ3LXA3 575 aa27.75■■■□□ 2.03
UBE2E3-202ENST00000410062 MUM1L1Q5H9M0 696 aa27.75■■■□□ 2.03
UBE2E3-202ENST00000410062 APOA5Q6Q788 366 aa27.75■■■□□ 2.03
UBE2E3-202ENST00000410062 SYNE3Q6ZMZ3 975 aa27.75■■■□□ 2.03
UBE2E3-202ENST00000410062 UPF3BQ9BZI7 483 aaKnown RBP27.75■■■□□ 2.03
UBE2E3-202ENST00000410062 TM6SF1Q9BZW5 370 aa27.75■■■□□ 2.03
UBE2E3-202ENST00000410062 FLRT1Q9NZU1 646 aa27.75■■■□□ 2.03
UBE2E3-202ENST00000410062 KIF5BP33176 963 aa27.74■■■□□ 2.03
UBE2E3-202ENST00000410062 TRIM32Q13049 653 aa27.74■■■□□ 2.03
UBE2E3-202ENST00000410062 QRICH1Q2TAL8 776 aa27.74■■■□□ 2.03
UBE2E3-202ENST00000410062 ANKRD35Q8N283 1001 aa27.74■■■□□ 2.03
UBE2E3-202ENST00000410062 BRF1Q92994 677 aa27.74■■■□□ 2.03
UBE2E3-202ENST00000410062 CYP46A1Q9Y6A2 500 aa27.74■■■□□ 2.03
UBE2E3-202ENST00000410062 BAZ2BQ9UIF8 2168 aaKnown RBP27.74■■■□□ 2.03
UBE2E3-202ENST00000410062 KLF18A0A0U1RQI7 1052 aa27.73■■■□□ 2.03
UBE2E3-202ENST00000410062 CYTH3O43739 400 aa27.73■■■□□ 2.03
UBE2E3-202ENST00000410062 HMGCRP04035 888 aa27.73■■■□□ 2.03
UBE2E3-202ENST00000410062 MTFR1Q15390 333 aa27.73■■■□□ 2.03
UBE2E3-202ENST00000410062 USH1GQ495M9 461 aa27.73■■■□□ 2.03
UBE2E3-202ENST00000410062 DDX11Q96FC9 970 aa27.73■■■□□ 2.03
UBE2E3-202ENST00000410062 MYH6P13533 1939 aa27.73■■■□□ 2.03
UBE2E3-202ENST00000410062 UBXN2AP68543 259 aa27.73■■■□□ 2.03
UBE2E3-202ENST00000410062 APOBRQ0VD83 1088 aa27.73■■■□□ 2.03
UBE2E3-202ENST00000410062 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.73■■■□□ 2.03
UBE2E3-202ENST00000410062 FANCBQ8NB91 859 aa27.73■■■□□ 2.03
UBE2E3-202ENST00000410062 RIOX1Q9H6W3 641 aa27.73■■■□□ 2.03
UBE2E3-202ENST00000410062 NAP1L2Q9ULW6 460 aaPredicted RBP27.73■■■□□ 2.03
UBE2E3-202ENST00000410062 PLEKHA8P1O95397 391 aa27.72■■■□□ 2.03
UBE2E3-202ENST00000410062 ANAPC15P60006 121 aa27.72■■■□□ 2.03
UBE2E3-202ENST00000410062 HOMER1Q86YM7 354 aa27.72■■■□□ 2.03
UBE2E3-202ENST00000410062 TRMT44Q8IYL2 757 aaKnown RBP27.72■■■□□ 2.03
UBE2E3-202ENST00000410062 CMTR1Q8N1G2 835 aaKnown RBP27.72■■■□□ 2.03
UBE2E3-202ENST00000410062 MTMR8Q96EF0 704 aa27.72■■■□□ 2.03
UBE2E3-202ENST00000410062 A1CFQ9NQ94 594 aaKnown RBP27.72■■■□□ 2.03
UBE2E3-202ENST00000410062 SLC5A4Q9NY91 659 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms