RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 STRNO43815 780 aa17.02■□□□□ 0.31
CDPF1-203ENST00000404583 MAP2K5Q13163 448 aa17.02■□□□□ 0.31
CDPF1-203ENST00000404583 GRB14Q14449 540 aa17.02■□□□□ 0.31
CDPF1-203ENST00000404583 GRM4Q14833 912 aa17.02■□□□□ 0.31
CDPF1-203ENST00000404583 C8orf34Q49A92 452 aa17.02■□□□□ 0.31
CDPF1-203ENST00000404583 ZNF654Q8IZM8 581 aa17.02■□□□□ 0.31
CDPF1-203ENST00000404583 NUP133Q8WUM0 1156 aa17.02■□□□□ 0.31
CDPF1-203ENST00000404583 WDR19Q8NEZ3 1342 aa17.01■□□□□ 0.31
CDPF1-203ENST00000404583 PALM3A6NDB9 673 aaPredicted RBP17.01■□□□□ 0.31
CDPF1-203ENST00000404583 KLRF2D3W0D1 207 aa17.01■□□□□ 0.31
CDPF1-203ENST00000404583 FCER1AP12319 257 aa17.01■□□□□ 0.31
CDPF1-203ENST00000404583 TAL1P17542 331 aaPredicted RBP17.01■□□□□ 0.31
CDPF1-203ENST00000404583 CASTP20810 708 aaKnown RBP17.01■□□□□ 0.31
CDPF1-203ENST00000404583 ADORA2AP29274 412 aa17.01■□□□□ 0.31
CDPF1-203ENST00000404583 COPB2P35606 906 aa17.01■□□□□ 0.31
CDPF1-203ENST00000404583 BLOC1S2Q6QNY1 142 aa17.01■□□□□ 0.31
CDPF1-203ENST00000404583 NBPF11Q86T75 865 aa17.01■□□□□ 0.31
CDPF1-203ENST00000404583 ADGRF4Q8IZF3 695 aa17.01■□□□□ 0.31
CDPF1-203ENST00000404583 SLAIN1Q8ND83 568 aa17.01■□□□□ 0.31
CDPF1-203ENST00000404583 VAT1LQ9HCJ6 419 aa17.01■□□□□ 0.31
CDPF1-203ENST00000404583 HOMER2Q9NSB8 354 aa17.01■□□□□ 0.31
CDPF1-203ENST00000404583 MKI67P46013 3256 aaKnown RBP17.01■□□□□ 0.31
CDPF1-203ENST00000404583 ICAM1P05362 532 aa17■□□□□ 0.31
CDPF1-203ENST00000404583 ALAS1P13196 640 aa17■□□□□ 0.31
CDPF1-203ENST00000404583 PSMA5P28066 241 aa17■□□□□ 0.31
CDPF1-203ENST00000404583 RGS2P41220 211 aa17■□□□□ 0.31
CDPF1-203ENST00000404583 DPP9Q86TI2 863 aa17■□□□□ 0.31
CDPF1-203ENST00000404583 RAB11FIP4Q86YS3 637 aa17■□□□□ 0.31
CDPF1-203ENST00000404583 PXYLP1Q8TE99 480 aa17■□□□□ 0.31
CDPF1-203ENST00000404583 ARMC5Q96C12 935 aa17■□□□□ 0.31
CDPF1-203ENST00000404583 MMP19Q99542 508 aa17■□□□□ 0.31
CDPF1-203ENST00000404583 BIN2Q9UBW5 565 aaPredicted RBP17■□□□□ 0.31
CDPF1-203ENST00000404583 CCPG1Q9ULG6 757 aa17■□□□□ 0.31
CDPF1-203ENST00000404583 SLC12A7Q9Y666 1083 aa17■□□□□ 0.31
CDPF1-203ENST00000404583 DHX16O60231 1041 aaKnown RBP16.99■□□□□ 0.31
CDPF1-203ENST00000404583 EIF5BO60841 1220 aaKnown RBP16.99■□□□□ 0.31
CDPF1-203ENST00000404583 COBLO75128 1261 aa16.99■□□□□ 0.31
CDPF1-203ENST00000404583 DDAH1O94760 285 aa16.99■□□□□ 0.31
CDPF1-203ENST00000404583 MYCP01106 439 aaPredicted RBP16.99■□□□□ 0.31
CDPF1-203ENST00000404583 XRCC5P13010 732 aaKnown RBP16.99■□□□□ 0.31
CDPF1-203ENST00000404583 RXRAP19793 462 aa16.99■□□□□ 0.31
CDPF1-203ENST00000404583 RPS6KB1P23443 525 aa16.99■□□□□ 0.31
CDPF1-203ENST00000404583 CCL14Q16627 93 aa16.99■□□□□ 0.31
CDPF1-203ENST00000404583 Q6ZUG5 572 aa16.99■□□□□ 0.31
CDPF1-203ENST00000404583 SGMS1Q86VZ5 419 aa16.99■□□□□ 0.31
CDPF1-203ENST00000404583 ABRAQ8N0Z2 381 aa16.99■□□□□ 0.31
CDPF1-203ENST00000404583 CHST13Q8NET6 341 aa16.99■□□□□ 0.31
CDPF1-203ENST00000404583 NPLOC4Q8TAT6 608 aa16.99■□□□□ 0.31
CDPF1-203ENST00000404583 ZNF333Q96JL9 665 aa16.99■□□□□ 0.31
CDPF1-203ENST00000404583 TRERF1Q96PN7 1200 aa16.99■□□□□ 0.31
CDPF1-203ENST00000404583 JMJD4Q9H9V9 463 aa16.99■□□□□ 0.31
CDPF1-203ENST00000404583 PLXNA1Q9UIW2 1896 aa16.99■□□□□ 0.31
CDPF1-203ENST00000404583 ZNF236Q9UL36 1845 aa16.98■□□□□ 0.31
CDPF1-203ENST00000404583 PGK2P07205 417 aa16.98■□□□□ 0.31
CDPF1-203ENST00000404583 FGD1P98174 961 aa16.98■□□□□ 0.31
CDPF1-203ENST00000404583 KCTD2Q14681 263 aa16.98■□□□□ 0.31
CDPF1-203ENST00000404583 CCDC144CPQ8IYA2 1237 aa16.98■□□□□ 0.31
CDPF1-203ENST00000404583 TRIB2Q92519 343 aa16.98■□□□□ 0.31
CDPF1-203ENST00000404583 MAP3K14Q99558 947 aa16.98■□□□□ 0.31
CDPF1-203ENST00000404583 APBA2Q99767 749 aa16.98■□□□□ 0.31
CDPF1-203ENST00000404583 ZSWIM6Q9HCJ5 1215 aa16.98■□□□□ 0.31
CDPF1-203ENST00000404583 RNF146Q9NTX7 359 aa16.98■□□□□ 0.31
CDPF1-203ENST00000404583 BRPF3Q9ULD4 1205 aa16.98■□□□□ 0.31
CDPF1-203ENST00000404583 INHAP05111 366 aa16.97■□□□□ 0.31
CDPF1-203ENST00000404583 HOXC6P09630 235 aa16.97■□□□□ 0.31
CDPF1-203ENST00000404583 TRIM32Q13049 653 aa16.97■□□□□ 0.31
CDPF1-203ENST00000404583 MTFR1Q15390 333 aa16.97■□□□□ 0.31
CDPF1-203ENST00000404583 CDC37Q16543 378 aaPredicted RBP16.97■□□□□ 0.31
CDPF1-203ENST00000404583 SLC35G1Q2M3R5 365 aa16.97■□□□□ 0.31
CDPF1-203ENST00000404583 TKFCQ3LXA3 575 aa16.97■□□□□ 0.31
CDPF1-203ENST00000404583 MUM1L1Q5H9M0 696 aa16.97■□□□□ 0.31
CDPF1-203ENST00000404583 RUFY3Q7L099 469 aa16.97■□□□□ 0.31
CDPF1-203ENST00000404583 CTCFLQ8NI51 663 aaPredicted RBP16.97■□□□□ 0.31
CDPF1-203ENST00000404583 ACAD9Q9H845 621 aa16.97■□□□□ 0.31
CDPF1-203ENST00000404583 FLRT1Q9NZU1 646 aa16.97■□□□□ 0.31
CDPF1-203ENST00000404583 FBXO40Q9UH90 709 aa16.97■□□□□ 0.31
CDPF1-203ENST00000404583 CALM1P0DP23 149 aa16.96■□□□□ 0.31
CDPF1-203ENST00000404583 CALM2P0DP24 149 aa16.96■□□□□ 0.31
CDPF1-203ENST00000404583 CALM3P0DP25 149 aa16.96■□□□□ 0.31
CDPF1-203ENST00000404583 QRICH1Q2TAL8 776 aa16.96■□□□□ 0.31
CDPF1-203ENST00000404583 APOA5Q6Q788 366 aa16.96■□□□□ 0.31
CDPF1-203ENST00000404583 SYNE3Q6ZMZ3 975 aa16.96■□□□□ 0.31
CDPF1-203ENST00000404583 MICU3Q86XE3 530 aa16.96■□□□□ 0.31
CDPF1-203ENST00000404583 ANKRD35Q8N283 1001 aa16.96■□□□□ 0.31
CDPF1-203ENST00000404583 DDX11Q96FC9 970 aa16.96■□□□□ 0.31
CDPF1-203ENST00000404583 UPF3BQ9BZI7 483 aaKnown RBP16.96■□□□□ 0.31
CDPF1-203ENST00000404583 TM6SF1Q9BZW5 370 aa16.96■□□□□ 0.31
CDPF1-203ENST00000404583 RIOX1Q9H6W3 641 aa16.96■□□□□ 0.31
CDPF1-203ENST00000404583 CYP46A1Q9Y6A2 500 aa16.96■□□□□ 0.31
CDPF1-203ENST00000404583 KIAA0100Q14667 2235 aaKnown RBP16.96■□□□□ 0.3
CDPF1-203ENST00000404583 KLF18A0A0U1RQI7 1052 aa16.96■□□□□ 0.3
CDPF1-203ENST00000404583 POTEFA5A3E0 1075 aa16.96■□□□□ 0.3
CDPF1-203ENST00000404583 CYTH3O43739 400 aa16.96■□□□□ 0.3
CDPF1-203ENST00000404583 HMGCRP04035 888 aa16.96■□□□□ 0.3
CDPF1-203ENST00000404583 KIF5BP33176 963 aa16.96■□□□□ 0.3
CDPF1-203ENST00000404583 UBXN2AP68543 259 aa16.96■□□□□ 0.3
CDPF1-203ENST00000404583 APOBRQ0VD83 1088 aa16.96■□□□□ 0.3
CDPF1-203ENST00000404583 USH1GQ495M9 461 aa16.96■□□□□ 0.3
CDPF1-203ENST00000404583 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.96■□□□□ 0.3
CDPF1-203ENST00000404583 TRMT44Q8IYL2 757 aaKnown RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms