RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 COPB2P35606 906 aa16.51■□□□□ 0.23
HLA-DQB1-202ENST00000399079 GJA8P48165 433 aa16.51■□□□□ 0.23
HLA-DQB1-202ENST00000399079 ANTXR2P58335 489 aa16.51■□□□□ 0.23
HLA-DQB1-202ENST00000399079 SYDE2Q5VT97 1194 aa16.51■□□□□ 0.23
HLA-DQB1-202ENST00000399079 MB21D2Q8IYB1 491 aaPredicted RBP16.51■□□□□ 0.23
HLA-DQB1-202ENST00000399079 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.51■□□□□ 0.23
HLA-DQB1-202ENST00000399079 HMX1Q9NP08 348 aaPredicted RBP16.51■□□□□ 0.23
HLA-DQB1-202ENST00000399079 SGPL1O95470 568 aa16.5■□□□□ 0.23
HLA-DQB1-202ENST00000399079 CCND3P30281 292 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-202ENST00000399079 UBA5Q9GZZ9 404 aa16.5■□□□□ 0.23
HLA-DQB1-202ENST00000399079 IGHA2P01877 340 aa16.5■□□□□ 0.23
HLA-DQB1-202ENST00000399079 ALAS1P13196 640 aa16.5■□□□□ 0.23
HLA-DQB1-202ENST00000399079 GPATCH4Q5T3I0 446 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB1-202ENST00000399079 MFSD14CQ5VZR4 134 aa16.5■□□□□ 0.23
HLA-DQB1-202ENST00000399079 MAML3Q96JK9 1138 aa16.5■□□□□ 0.23
HLA-DQB1-202ENST00000399079 RANBP17Q9H2T7 1088 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB1-202ENST00000399079 GPHNQ9NQX3 736 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-202ENST00000399079 ZNF236Q9UL36 1845 aa16.5■□□□□ 0.23
HLA-DQB1-202ENST00000399079 ERICH2A1L162 156 aa16.49■□□□□ 0.23
HLA-DQB1-202ENST00000399079 ZNF792Q3KQV3 632 aa16.49■□□□□ 0.23
HLA-DQB1-202ENST00000399079 OLFML2BQ68BL8 750 aa16.49■□□□□ 0.23
HLA-DQB1-202ENST00000399079 STAG2Q8N3U4 1231 aa16.49■□□□□ 0.23
HLA-DQB1-202ENST00000399079 CHST13Q8NET6 341 aa16.49■□□□□ 0.23
HLA-DQB1-202ENST00000399079 IGDCC4Q8TDY8 1250 aa16.49■□□□□ 0.23
HLA-DQB1-202ENST00000399079 DDX11Q96FC9 970 aa16.49■□□□□ 0.23
HLA-DQB1-202ENST00000399079 TRERF1Q96PN7 1200 aa16.49■□□□□ 0.23
HLA-DQB1-202ENST00000399079 RNF146Q9NTX7 359 aa16.49■□□□□ 0.23
HLA-DQB1-202ENST00000399079 SLC5A4Q9NY91 659 aa16.49■□□□□ 0.23
HLA-DQB1-202ENST00000399079 CCPG1Q9ULG6 757 aa16.49■□□□□ 0.23
HLA-DQB1-202ENST00000399079 ZNFX1Q9P2E3 1918 aaKnown RBP16.49■□□□□ 0.23
HLA-DQB1-202ENST00000399079 TFRCP02786 760 aaKnown RBP16.48■□□□□ 0.23
HLA-DQB1-202ENST00000399079 ICAM1P05362 532 aa16.48■□□□□ 0.23
HLA-DQB1-202ENST00000399079 PARP1P09874 1014 aaKnown RBP16.48■□□□□ 0.23
HLA-DQB1-202ENST00000399079 WTAPQ15007 396 aa16.48■□□□□ 0.23
HLA-DQB1-202ENST00000399079 MUM1L1Q5H9M0 696 aa16.48■□□□□ 0.23
HLA-DQB1-202ENST00000399079 TMEM67Q5HYA8 995 aa16.48■□□□□ 0.23
HLA-DQB1-202ENST00000399079 PRAMEF19Q5SWL8 479 aa16.48■□□□□ 0.23
HLA-DQB1-202ENST00000399079 RASEFQ8IZ41 740 aa16.48■□□□□ 0.23
HLA-DQB1-202ENST00000399079 ANKRD35Q8N283 1001 aa16.48■□□□□ 0.23
HLA-DQB1-202ENST00000399079 TRPV1Q8NER1 839 aa16.48■□□□□ 0.23
HLA-DQB1-202ENST00000399079 ACAD9Q9H845 621 aa16.48■□□□□ 0.23
HLA-DQB1-202ENST00000399079 FBXO40Q9UH90 709 aa16.48■□□□□ 0.23
HLA-DQB1-202ENST00000399079 DNAJC25-GNG10A0A024R161 153 aa16.47■□□□□ 0.23
HLA-DQB1-202ENST00000399079 PRC1O43663 620 aa16.47■□□□□ 0.23
HLA-DQB1-202ENST00000399079 SART3Q15020 963 aaKnown RBP16.47■□□□□ 0.23
HLA-DQB1-202ENST00000399079 ASPRV1Q53RT3 343 aa16.47■□□□□ 0.23
HLA-DQB1-202ENST00000399079 RNF20Q5VTR2 975 aa16.47■□□□□ 0.23
HLA-DQB1-202ENST00000399079 SMCHD1A6NHR9 2005 aa16.47■□□□□ 0.23
HLA-DQB1-202ENST00000399079 CNGA1P29973 690 aa16.46■□□□□ 0.23
HLA-DQB1-202ENST00000399079 MCM5P33992 734 aa16.46■□□□□ 0.23
HLA-DQB1-202ENST00000399079 ADCK5Q3MIX3 580 aa16.46■□□□□ 0.23
HLA-DQB1-202ENST00000399079 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.46■□□□□ 0.23
HLA-DQB1-202ENST00000399079 ADGRF4Q8IZF3 695 aa16.46■□□□□ 0.23
HLA-DQB1-202ENST00000399079 LRRC2Q9BYS8 371 aa16.46■□□□□ 0.23
HLA-DQB1-202ENST00000399079 CRISPLD2Q9H0B8 497 aa16.46■□□□□ 0.23
HLA-DQB1-202ENST00000399079 A1CFQ9NQ94 594 aaKnown RBP16.46■□□□□ 0.23
HLA-DQB1-202ENST00000399079 MAD2L2Q9UI95 211 aa16.46■□□□□ 0.23
HLA-DQB1-202ENST00000399079 CYBAP13498 195 aa16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 CNTN2Q02246 1040 aa16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 TINF2Q9BSI4 451 aa16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 LY9Q9HBG7 655 aa16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 VAT1LQ9HCJ6 419 aa16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 DIS3Q9Y2L1 958 aaKnown RBP16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 KLRF2D3W0D1 207 aa16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 NFIBO00712 420 aa16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 DHX16O60231 1041 aaKnown RBP16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 TROAPQ12815 778 aa16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 TKFCQ3LXA3 575 aa16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 USH1GQ495M9 461 aa16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 LHX8Q68G74 356 aa16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 NSMFQ6X4W1 530 aa16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 FGD4Q96M96 766 aa16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 MYL10Q9BUA6 226 aa16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 JMJD4Q9H9V9 463 aa16.45■□□□□ 0.22
HLA-DQB1-202ENST00000399079 PALM3A6NDB9 673 aaPredicted RBP16.44■□□□□ 0.22
HLA-DQB1-202ENST00000399079 CDC37Q16543 378 aaPredicted RBP16.44■□□□□ 0.22
HLA-DQB1-202ENST00000399079 TSGA10IPQ3SY00 556 aa16.44■□□□□ 0.22
HLA-DQB1-202ENST00000399079 ANO1Q5XXA6 986 aa16.44■□□□□ 0.22
HLA-DQB1-202ENST00000399079 UBE2Q1Q7Z7E8 422 aa16.44■□□□□ 0.22
HLA-DQB1-202ENST00000399079 TCEANC2Q96MN5 208 aa16.44■□□□□ 0.22
HLA-DQB1-202ENST00000399079 NEK1Q96PY6 1258 aa16.44■□□□□ 0.22
HLA-DQB1-202ENST00000399079 PURBQ96QR8 312 aaKnown RBP16.44■□□□□ 0.22
HLA-DQB1-202ENST00000399079 PLXNA1Q9UIW2 1896 aa16.44■□□□□ 0.22
HLA-DQB1-202ENST00000399079 SH2B2O14492 632 aaPredicted RBP16.43■□□□□ 0.22
HLA-DQB1-202ENST00000399079 FARP2O94887 1054 aaPredicted RBP16.43■□□□□ 0.22
HLA-DQB1-202ENST00000399079 GRM4Q14833 912 aa16.43■□□□□ 0.22
HLA-DQB1-202ENST00000399079 SLC35G1Q2M3R5 365 aa16.43■□□□□ 0.22
HLA-DQB1-202ENST00000399079 CATIPQ7Z7H3 387 aa16.43■□□□□ 0.22
HLA-DQB1-202ENST00000399079 FAM133AQ8N9E0 248 aa16.43■□□□□ 0.22
HLA-DQB1-202ENST00000399079 DIS3LQ8TF46 1054 aaKnown RBP16.43■□□□□ 0.22
HLA-DQB1-202ENST00000399079 NUP133Q8WUM0 1156 aa16.43■□□□□ 0.22
HLA-DQB1-202ENST00000399079 CLEC4DQ8WXI8 215 aa16.43■□□□□ 0.22
HLA-DQB1-202ENST00000399079 TMEM87BQ96K49 555 aa16.43■□□□□ 0.22
HLA-DQB1-202ENST00000399079 CYP39A1Q9NYL5 469 aa16.43■□□□□ 0.22
HLA-DQB1-202ENST00000399079 OGDHLQ9ULD0 1010 aa16.43■□□□□ 0.22
HLA-DQB1-202ENST00000399079 DDX49Q9Y6V7 483 aaKnown RBP16.43■□□□□ 0.22
HLA-DQB1-202ENST00000399079 POTEB2H3BUK9 544 aa16.42■□□□□ 0.22
HLA-DQB1-202ENST00000399079 REC8O95072 547 aa16.42■□□□□ 0.22
HLA-DQB1-202ENST00000399079 SNAI1O95863 264 aaPredicted RBP16.42■□□□□ 0.22
HLA-DQB1-202ENST00000399079 HSPA4P34932 840 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms