RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 SEC24BO95487 1268 aa24.71■■□□□ 1.55
TSPAN4-206ENST00000397408 ELNP15502 786 aa24.71■■□□□ 1.55
TSPAN4-206ENST00000397408 CASTP20810 708 aaKnown RBP24.71■■□□□ 1.55
TSPAN4-206ENST00000397408 PSMA5P28066 241 aa24.71■■□□□ 1.55
TSPAN4-206ENST00000397408 ADORA2AP29274 412 aa24.71■■□□□ 1.55
TSPAN4-206ENST00000397408 ARMC5Q96C12 935 aa24.71■■□□□ 1.55
TSPAN4-206ENST00000397408 APBA2Q99767 749 aa24.71■■□□□ 1.55
TSPAN4-206ENST00000397408 HOMER2Q9NSB8 354 aa24.71■■□□□ 1.55
TSPAN4-206ENST00000397408 PALM3A6NDB9 673 aaPredicted RBP24.7■■□□□ 1.55
TSPAN4-206ENST00000397408 KLRF2D3W0D1 207 aa24.7■■□□□ 1.55
TSPAN4-206ENST00000397408 DHX16O60231 1041 aaKnown RBP24.7■■□□□ 1.55
TSPAN4-206ENST00000397408 FCER1AP12319 257 aa24.7■■□□□ 1.55
TSPAN4-206ENST00000397408 SGMS1Q86VZ5 419 aa24.7■■□□□ 1.55
TSPAN4-206ENST00000397408 ABRAQ8N0Z2 381 aa24.7■■□□□ 1.55
TSPAN4-206ENST00000397408 PXYLP1Q8TE99 480 aa24.7■■□□□ 1.55
TSPAN4-206ENST00000397408 MMP19Q99542 508 aa24.7■■□□□ 1.55
TSPAN4-206ENST00000397408 CCPG1Q9ULG6 757 aa24.7■■□□□ 1.55
TSPAN4-206ENST00000397408 SLC12A7Q9Y666 1083 aa24.7■■□□□ 1.55
TSPAN4-206ENST00000397408 ICAM1P05362 532 aa24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 TAL1P17542 331 aaPredicted RBP24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 RPS6KB1P23443 525 aa24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 FGD1P98174 961 aa24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 KCTD2Q14681 263 aa24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 NBPF11Q86T75 865 aa24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 ADGRF4Q8IZF3 695 aa24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 CCDC85CA6NKD9 419 aa24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 XRCC5P13010 732 aaKnown RBP24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 ALAS1P13196 640 aa24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 CDC37Q16543 378 aaPredicted RBP24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 RAB11FIP4Q86YS3 637 aa24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 CHST13Q8NET6 341 aa24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 CTCFLQ8NI51 663 aaPredicted RBP24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 ZNF333Q96JL9 665 aa24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 RNF146Q9NTX7 359 aa24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 BIN2Q9UBW5 565 aaPredicted RBP24.69■■□□□ 1.54
TSPAN4-206ENST00000397408 RXRAP19793 462 aa24.68■■□□□ 1.54
TSPAN4-206ENST00000397408 TKFCQ3LXA3 575 aa24.68■■□□□ 1.54
TSPAN4-206ENST00000397408 DPP9Q86TI2 863 aa24.68■■□□□ 1.54
TSPAN4-206ENST00000397408 TRIB2Q92519 343 aa24.68■■□□□ 1.54
TSPAN4-206ENST00000397408 MAP3K14Q99558 947 aa24.68■■□□□ 1.54
TSPAN4-206ENST00000397408 VAT1LQ9HCJ6 419 aa24.68■■□□□ 1.54
TSPAN4-206ENST00000397408 FBXO40Q9UH90 709 aa24.68■■□□□ 1.54
TSPAN4-206ENST00000397408 MYCP01106 439 aaPredicted RBP24.67■■□□□ 1.54
TSPAN4-206ENST00000397408 HOXC6P09630 235 aa24.67■■□□□ 1.54
TSPAN4-206ENST00000397408 CALM1P0DP23 149 aa24.67■■□□□ 1.54
TSPAN4-206ENST00000397408 CALM2P0DP24 149 aa24.67■■□□□ 1.54
TSPAN4-206ENST00000397408 CALM3P0DP25 149 aa24.67■■□□□ 1.54
TSPAN4-206ENST00000397408 KIF5BP33176 963 aa24.67■■□□□ 1.54
TSPAN4-206ENST00000397408 Q6ZUG5 572 aa24.67■■□□□ 1.54
TSPAN4-206ENST00000397408 MICU3Q86XE3 530 aa24.67■■□□□ 1.54
TSPAN4-206ENST00000397408 ACAD9Q9H845 621 aa24.67■■□□□ 1.54
TSPAN4-206ENST00000397408 COBLO75128 1261 aa24.66■■□□□ 1.54
TSPAN4-206ENST00000397408 HMGCRP04035 888 aa24.66■■□□□ 1.54
TSPAN4-206ENST00000397408 INHAP05111 366 aa24.66■■□□□ 1.54
TSPAN4-206ENST00000397408 CCL14Q16627 93 aa24.66■■□□□ 1.54
TSPAN4-206ENST00000397408 APOA5Q6Q788 366 aa24.66■■□□□ 1.54
TSPAN4-206ENST00000397408 SYNE3Q6ZMZ3 975 aa24.66■■□□□ 1.54
TSPAN4-206ENST00000397408 CCDC144CPQ8IYA2 1237 aa24.66■■□□□ 1.54
TSPAN4-206ENST00000397408 NPLOC4Q8TAT6 608 aa24.66■■□□□ 1.54
TSPAN4-206ENST00000397408 TRERF1Q96PN7 1200 aa24.66■■□□□ 1.54
TSPAN4-206ENST00000397408 TM6SF1Q9BZW5 370 aa24.66■■□□□ 1.54
TSPAN4-206ENST00000397408 JMJD4Q9H9V9 463 aa24.66■■□□□ 1.54
TSPAN4-206ENST00000397408 ZSWIM6Q9HCJ5 1215 aa24.66■■□□□ 1.54
TSPAN4-206ENST00000397408 SMCHD1A6NHR9 2005 aa24.66■■□□□ 1.54
TSPAN4-206ENST00000397408 PGK2P07205 417 aa24.65■■□□□ 1.54
TSPAN4-206ENST00000397408 SLC35G1Q2M3R5 365 aa24.65■■□□□ 1.54
TSPAN4-206ENST00000397408 QRICH1Q2TAL8 776 aa24.65■■□□□ 1.54
TSPAN4-206ENST00000397408 RUFY3Q7L099 469 aa24.65■■□□□ 1.54
TSPAN4-206ENST00000397408 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.65■■□□□ 1.545e-6■■■■■ 45.5
TSPAN4-206ENST00000397408 BRF1Q92994 677 aa24.65■■□□□ 1.54
TSPAN4-206ENST00000397408 UPF3BQ9BZI7 483 aaKnown RBP24.65■■□□□ 1.54
TSPAN4-206ENST00000397408 SLC5A4Q9NY91 659 aa24.65■■□□□ 1.54
TSPAN4-206ENST00000397408 PNMA2Q9UL42 364 aa24.65■■□□□ 1.54
TSPAN4-206ENST00000397408 BRPF3Q9ULD4 1205 aa24.65■■□□□ 1.54
TSPAN4-206ENST00000397408 CYP46A1Q9Y6A2 500 aa24.65■■□□□ 1.54
TSPAN4-206ENST00000397408 ZNFX1Q9P2E3 1918 aaKnown RBP24.65■■□□□ 1.54
TSPAN4-206ENST00000397408 KLF18A0A0U1RQI7 1052 aa24.64■■□□□ 1.54
TSPAN4-206ENST00000397408 ANAPC15P60006 121 aa24.64■■□□□ 1.54
TSPAN4-206ENST00000397408 UBXN2AP68543 259 aa24.64■■□□□ 1.54
TSPAN4-206ENST00000397408 MUM1L1Q5H9M0 696 aa24.64■■□□□ 1.54
TSPAN4-206ENST00000397408 TRMT44Q8IYL2 757 aaKnown RBP24.64■■□□□ 1.54
TSPAN4-206ENST00000397408 ANKRD35Q8N283 1001 aa24.64■■□□□ 1.54
TSPAN4-206ENST00000397408 DDX11Q96FC9 970 aa24.64■■□□□ 1.54
TSPAN4-206ENST00000397408 BAZ2BQ9UIF8 2168 aaKnown RBP24.64■■□□□ 1.54
TSPAN4-206ENST00000397408 MYH6P13533 1939 aa24.64■■□□□ 1.53
TSPAN4-206ENST00000397408 CAPN15O75808 1086 aa24.63■■□□□ 1.53
TSPAN4-206ENST00000397408 USH1GQ495M9 461 aa24.63■■□□□ 1.53
TSPAN4-206ENST00000397408 FLRT1Q9NZU1 646 aa24.63■■□□□ 1.53
TSPAN4-206ENST00000397408 NAP1L2Q9ULW6 460 aaPredicted RBP24.63■■□□□ 1.53
TSPAN4-206ENST00000397408 ZBTB43O43298 467 aa24.62■■□□□ 1.53
TSPAN4-206ENST00000397408 CYTH3O43739 400 aa24.62■■□□□ 1.53
TSPAN4-206ENST00000397408 PLEKHA8P1O95397 391 aa24.62■■□□□ 1.53
TSPAN4-206ENST00000397408 APOBRQ0VD83 1088 aa24.62■■□□□ 1.53
TSPAN4-206ENST00000397408 TRIM32Q13049 653 aa24.62■■□□□ 1.53
TSPAN4-206ENST00000397408 MTFR1Q15390 333 aa24.62■■□□□ 1.53
TSPAN4-206ENST00000397408 HOMER1Q86YM7 354 aa24.62■■□□□ 1.53
TSPAN4-206ENST00000397408 FANCBQ8NB91 859 aa24.62■■□□□ 1.53
TSPAN4-206ENST00000397408 MTMR8Q96EF0 704 aa24.62■■□□□ 1.53
TSPAN4-206ENST00000397408 RIOX1Q9H6W3 641 aa24.62■■□□□ 1.53
TSPAN4-206ENST00000397408 A1CFQ9NQ94 594 aaKnown RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms