RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 GMLQ99445 158 aa21.85■■□□□ 1.09
GMDS-201ENST00000380805 KANSL2Q9H9L4 492 aa21.85■■□□□ 1.09
GMDS-201ENST00000380805 NRBP1Q9UHY1 535 aa21.85■■□□□ 1.09
GMDS-201ENST00000380805 PNMA6FA0A0J9YX94 578 aa21.84■■□□□ 1.09
GMDS-201ENST00000380805 EIF6P56537 245 aaKnown RBP21.84■■□□□ 1.09
GMDS-201ENST00000380805 RSBN1LQ6PCB5 846 aaPredicted RBP21.84■■□□□ 1.09
GMDS-201ENST00000380805 GRAMD1CQ8IYS0 662 aa21.84■■□□□ 1.09
GMDS-201ENST00000380805 JMJD4Q9H9V9 463 aa21.84■■□□□ 1.09
GMDS-201ENST00000380805 IMPACTQ9P2X3 320 aa21.84■■□□□ 1.09
GMDS-201ENST00000380805 NEMFO60524 1076 aa21.83■■□□□ 1.09
GMDS-201ENST00000380805 VIL1P09327 827 aaKnown RBP21.83■■□□□ 1.09
GMDS-201ENST00000380805 TCP10Q12799 353 aa21.83■■□□□ 1.09
GMDS-201ENST00000380805 CERKLQ49MI3 558 aaPredicted RBP21.83■■□□□ 1.09
GMDS-201ENST00000380805 REXO1Q8N1G1 1221 aaKnown RBP21.83■■□□□ 1.09
GMDS-201ENST00000380805 ENOX1Q8TC92 643 aaKnown RBP21.83■■□□□ 1.09
GMDS-201ENST00000380805 ERCC5P28715 1186 aaPredicted RBP21.83■■□□□ 1.08
GMDS-201ENST00000380805 NOLC1Q14978 699 aaKnown RBP eCLIP21.83■■□□□ 1.08
GMDS-201ENST00000380805 DTHD1Q6ZMT9 781 aa21.83■■□□□ 1.08
GMDS-201ENST00000380805 TMEM179Q6ZVK1 233 aa21.83■■□□□ 1.08
GMDS-201ENST00000380805 NEK8Q86SG6 692 aa21.83■■□□□ 1.08
GMDS-201ENST00000380805 ADGRF4Q8IZF3 695 aa21.83■■□□□ 1.08
GMDS-201ENST00000380805 DCAF4Q8WV16 495 aa21.83■■□□□ 1.08
GMDS-201ENST00000380805 CCSER1Q9C0I3 900 aa21.83■■□□□ 1.08
GMDS-201ENST00000380805 TMEM60Q9H2L4 133 aa21.83■■□□□ 1.08
GMDS-201ENST00000380805 PYCARDQ9ULZ3 195 aa21.83■■□□□ 1.08
GMDS-201ENST00000380805 SYNPO2Q9UMS6 1093 aa21.83■■□□□ 1.08
GMDS-201ENST00000380805 MPHOSPH10O00566 681 aaKnown RBP21.82■■□□□ 1.08
GMDS-201ENST00000380805 TXLNAP40222 546 aa21.82■■□□□ 1.08
GMDS-201ENST00000380805 PRMT6Q96LA8 375 aaPredicted RBP21.82■■□□□ 1.08
GMDS-201ENST00000380805 AK8Q96MA6 479 aa21.82■■□□□ 1.08
GMDS-201ENST00000380805 XPO4Q9C0E2 1151 aaKnown RBP21.82■■□□□ 1.08
GMDS-201ENST00000380805 TDRD3Q9H7E2 651 aaKnown RBP21.82■■□□□ 1.08
GMDS-201ENST00000380805 VAT1LQ9HCJ6 419 aa21.82■■□□□ 1.08
GMDS-201ENST00000380805 FER1L6Q2WGJ9 1857 aa21.81■■□□□ 1.08
GMDS-201ENST00000380805 TERF1P54274 439 aa21.81■■□□□ 1.08
GMDS-201ENST00000380805 GPCPD1Q9NPB8 672 aa21.81■■□□□ 1.08
GMDS-201ENST00000380805 SPDYE2BA6NHP3 402 aa21.8■■□□□ 1.08
GMDS-201ENST00000380805 SPDYE6P0CI01 402 aa21.8■■□□□ 1.08
GMDS-201ENST00000380805 EEF2P13639 858 aaKnown RBP21.8■■□□□ 1.08
GMDS-201ENST00000380805 LMOD1P29536 600 aaPredicted RBP21.8■■□□□ 1.08
GMDS-201ENST00000380805 ADCY7P51828 1080 aa21.8■■□□□ 1.08
GMDS-201ENST00000380805 FANCCQ00597 558 aa21.8■■□□□ 1.08
GMDS-201ENST00000380805 DHX8Q14562 1220 aaKnown RBP21.8■■□□□ 1.08
GMDS-201ENST00000380805 SIAH1Q8IUQ4 282 aa21.8■■□□□ 1.08
GMDS-201ENST00000380805 CACTINQ8WUQ7 758 aaKnown RBP21.8■■□□□ 1.08
GMDS-201ENST00000380805 IFNKQ9P0W0 207 aa21.8■■□□□ 1.08
GMDS-201ENST00000380805 ZBTB5O15062 677 aa21.8■■□□□ 1.08
GMDS-201ENST00000380805 GTPBP6O43824 516 aaPredicted RBP21.8■■□□□ 1.08
GMDS-201ENST00000380805 SLURP2P0DP57 97 aa21.8■■□□□ 1.08
GMDS-201ENST00000380805 ZNF18P17022 549 aa21.8■■□□□ 1.08
GMDS-201ENST00000380805 CLK2P49760 499 aaKnown RBP21.8■■□□□ 1.08
GMDS-201ENST00000380805 GSDMDP57764 484 aa21.8■■□□□ 1.08
GMDS-201ENST00000380805 GPR162Q16538 588 aa21.8■■□□□ 1.08
GMDS-201ENST00000380805 LRRC8AQ8IWT6 810 aa21.8■■□□□ 1.08
GMDS-201ENST00000380805 ZSCAN29Q8IWY8 852 aaPredicted RBP21.8■■□□□ 1.08
GMDS-201ENST00000380805 GMCL1P1Q8NEA9 526 aa21.8■■□□□ 1.08
GMDS-201ENST00000380805 RIC8AQ9NPQ8 531 aa21.8■■□□□ 1.08
GMDS-201ENST00000380805 DISC1Q9NRI5 854 aa21.8■■□□□ 1.08
GMDS-201ENST00000380805 PPP1R11O60927 126 aaPredicted RBP21.79■■□□□ 1.08
GMDS-201ENST00000380805 OR52Z1P0C646 297 aa21.79■■□□□ 1.08
GMDS-201ENST00000380805 ATP1A3P13637 1013 aa21.79■■□□□ 1.08
GMDS-201ENST00000380805 SEMA3FQ13275 785 aa21.79■■□□□ 1.08
GMDS-201ENST00000380805 TTBK2Q6IQ55 1244 aa21.79■■□□□ 1.08
GMDS-201ENST00000380805 MTMR14Q8NCE2 650 aa21.79■■□□□ 1.08
GMDS-201ENST00000380805 TBCKQ8TEA7 893 aa21.79■■□□□ 1.08
GMDS-201ENST00000380805 MTRQ99707 1265 aa21.79■■□□□ 1.08
GMDS-201ENST00000380805 TRIM34Q9BYJ4 488 aa21.79■■□□□ 1.08
GMDS-201ENST00000380805 HERC5Q9UII4 1024 aaKnown RBP21.79■■□□□ 1.08
GMDS-201ENST00000380805 FAM196BA6NMK8 535 aa21.78■■□□□ 1.08
GMDS-201ENST00000380805 NFKBIEO00221 500 aa21.78■■□□□ 1.08
GMDS-201ENST00000380805 CBFA2T2O43439 604 aa21.78■■□□□ 1.08
GMDS-201ENST00000380805 MYL1P05976 194 aa21.78■■□□□ 1.08
GMDS-201ENST00000380805 AFMP43652 599 aa21.78■■□□□ 1.08
GMDS-201ENST00000380805 FMR1Q06787 632 aaKnown RBP eCLIP21.78■■□□□ 1.083e-12■■■■■ 43.2
GMDS-201ENST00000380805 COA7Q96BR5 231 aa21.78■■□□□ 1.08
GMDS-201ENST00000380805 GMCL1Q96IK5 515 aa21.78■■□□□ 1.08
GMDS-201ENST00000380805 MED15Q96RN5 788 aa21.78■■□□□ 1.08
GMDS-201ENST00000380805 PSMD14O00487 310 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 ICA1Q05084 483 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 LRMPQ12912 555 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 CUL4BQ13620 913 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 CCDC96Q2M329 555 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 ABCB5Q2M3G0 1257 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 NAALADL2Q58DX5 795 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 FKBP1CQ5VVH2 108 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 ARHGAP27Q6ZUM4 889 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 LARGE2Q8N3Y3 721 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 FANCLQ9NW38 375 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 HDAC9Q9UKV0 1011 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 SEPT2Q15019 361 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 LETM2Q2VYF4 491 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 GLT8D2Q9H1C3 349 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 CUEDC2Q9H467 287 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 MAGEF1Q9HAY2 307 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 TMOD2Q9NZR1 351 aa21.77■■□□□ 1.08
GMDS-201ENST00000380805 BIN2Q9UBW5 565 aaPredicted RBP21.77■■□□□ 1.08
GMDS-201ENST00000380805 MYH7BA7E2Y1 1941 aa21.77■■□□□ 1.07
GMDS-201ENST00000380805 EDIL3O43854 480 aa21.76■■□□□ 1.07
GMDS-201ENST00000380805 CCNT1O60563 726 aaKnown RBP21.76■■□□□ 1.07
GMDS-201ENST00000380805 RASSF7Q02833 373 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms