RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 RESTQ13127 1097 aa17.09■□□□□ 0.33
SRPK1-201ENST00000346162 RAPGEF1Q13905 1077 aa17.09■□□□□ 0.33
SRPK1-201ENST00000346162 HAUS3Q68CZ6 603 aa17.09■□□□□ 0.33
SRPK1-201ENST00000346162 MTRF1LQ9UGC7 380 aaKnown RBP17.09■□□□□ 0.33
SRPK1-201ENST00000346162 SMCO2A6NFE2 343 aa17.09■□□□□ 0.33
SRPK1-201ENST00000346162 PAF1Q8N7H5 531 aa17.09■□□□□ 0.33
SRPK1-201ENST00000346162 FAM184BQ9ULE4 1060 aa17.09■□□□□ 0.33
SRPK1-201ENST00000346162 KIF23Q02241 960 aaPredicted RBP17.08■□□□□ 0.33
SRPK1-201ENST00000346162 CALCRLQ16602 461 aa17.08■□□□□ 0.33
SRPK1-201ENST00000346162 CROCCP2Q86T23 111 aa17.08■□□□□ 0.33
SRPK1-201ENST00000346162 TRIML1Q8N9V2 468 aa17.08■□□□□ 0.33
SRPK1-201ENST00000346162 TTLL11Q8NHH1 800 aa17.08■□□□□ 0.33
SRPK1-201ENST00000346162 NUP58Q9BVL2 599 aa17.08■□□□□ 0.33
SRPK1-201ENST00000346162 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.08■□□□□ 0.33
SRPK1-201ENST00000346162 HERC4Q5GLZ8 1057 aaPredicted RBP17.08■□□□□ 0.32
SRPK1-201ENST00000346162 CCDC25Q86WR0 208 aa17.08■□□□□ 0.32
SRPK1-201ENST00000346162 NAP1L3Q99457 506 aaPredicted RBP17.08■□□□□ 0.32
SRPK1-201ENST00000346162 USH1CQ9Y6N9 552 aa17.08■□□□□ 0.32
SRPK1-201ENST00000346162 USPL1Q5W0Q7 1092 aa17.08■□□□□ 0.32
SRPK1-201ENST00000346162 CCDC26Q8TAB7 109 aa17.08■□□□□ 0.32
SRPK1-201ENST00000346162 SH3BGRP55822 239 aaPredicted RBP17.08■□□□□ 0.32
SRPK1-201ENST00000346162 PSMD2Q13200 908 aa17.08■□□□□ 0.32
SRPK1-201ENST00000346162 GNPTABQ3T906 1256 aa17.08■□□□□ 0.32
SRPK1-201ENST00000346162 NKIRAS1Q9NYS0 192 aa17.08■□□□□ 0.32
SRPK1-201ENST00000346162 CDC42BPGQ6DT37 1551 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 SETD1BQ9UPS6 1966 aaKnown RBP17.07■□□□□ 0.32
SRPK1-201ENST00000346162 PCP11498 1178 aaKnown RBP17.07■□□□□ 0.32
SRPK1-201ENST00000346162 GTF2IP78347 998 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 CAPRIN2Q6IMN6 1127 aaKnown RBP17.07■□□□□ 0.32
SRPK1-201ENST00000346162 ERVV-1B6SEH8 477 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 CORO7P57737 925 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 PLS1Q14651 629 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 RBM26Q5T8P6 1007 aaKnown RBP17.07■□□□□ 0.32
SRPK1-201ENST00000346162 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 ENO4A6NNW6 628 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 CRB1P82279 1406 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 CEP120Q8N960 986 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.07■□□□□ 0.326e-8■■■□□ 15.1
SRPK1-201ENST00000346162 GPHNQ9NQX3 736 aaPredicted RBP17.07■□□□□ 0.32
SRPK1-201ENST00000346162 PRKAB2O43741 272 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 PPP6R2O75170 966 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 STAMBPO95630 424 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 CTNNA1P35221 906 aaKnown RBP17.07■□□□□ 0.32
SRPK1-201ENST00000346162 PTGDRQ13258 359 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 TOB2Q14106 344 aaPredicted RBP17.07■□□□□ 0.32
SRPK1-201ENST00000346162 DPCR1Q3MIW9 517 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 PLA2G4DQ86XP0 818 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 KLHL7Q8IXQ5 586 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 VCX3BQ9H321 246 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 VCX3AQ9NNX9 186 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 ATP8A2Q9NTI2 1148 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 ZBTB21Q9ULJ3 1066 aa17.07■□□□□ 0.32
SRPK1-201ENST00000346162 DDAH1O94760 285 aa17.06■□□□□ 0.32
SRPK1-201ENST00000346162 TAF11Q15544 211 aa17.06■□□□□ 0.32
SRPK1-201ENST00000346162 INF2Q27J81 1249 aa17.06■□□□□ 0.32
SRPK1-201ENST00000346162 RNF26Q9BY78 433 aaPredicted RBP17.06■□□□□ 0.32
SRPK1-201ENST00000346162 USP21Q9UK80 565 aa17.06■□□□□ 0.32
SRPK1-201ENST00000346162 KLRF2D3W0D1 207 aa17.06■□□□□ 0.32
SRPK1-201ENST00000346162 APBA1Q02410 837 aa17.06■□□□□ 0.32
SRPK1-201ENST00000346162 FOXP1Q9H334 677 aaPredicted RBP17.06■□□□□ 0.32
SRPK1-201ENST00000346162 PDCLQ13371 301 aa17.06■□□□□ 0.32
SRPK1-201ENST00000346162 PTPN21Q16825 1174 aa17.06■□□□□ 0.32
SRPK1-201ENST00000346162 CFAP221Q4G0U5 840 aa17.06■□□□□ 0.32
SRPK1-201ENST00000346162 GRIPAP1Q4V328 841 aa17.06■□□□□ 0.32
SRPK1-201ENST00000346162 EP400NLQ6ZTU2 488 aa17.06■□□□□ 0.32
SRPK1-201ENST00000346162 ZNF804BA4D1E1 1349 aa17.06■□□□□ 0.32
SRPK1-201ENST00000346162 TCP10Q12799 353 aa17.05■□□□□ 0.32
SRPK1-201ENST00000346162 ZSWIM5Q9P217 1185 aa17.05■□□□□ 0.32
SRPK1-201ENST00000346162 SARM1Q6SZW1 724 aa17.05■□□□□ 0.32
SRPK1-201ENST00000346162 JDP2Q8WYK2 163 aa17.05■□□□□ 0.32
SRPK1-201ENST00000346162 KLC4Q9NSK0 619 aa17.05■□□□□ 0.32
SRPK1-201ENST00000346162 SH2B2O14492 632 aaPredicted RBP17.05■□□□□ 0.32
SRPK1-201ENST00000346162 IFNAR1P17181 557 aa17.05■□□□□ 0.32
SRPK1-201ENST00000346162 MTMR3Q13615 1198 aa17.05■□□□□ 0.32
SRPK1-201ENST00000346162 RAB3IL1Q8TBN0 382 aa17.05■□□□□ 0.32
SRPK1-201ENST00000346162 GPKOWQ92917 476 aaPredicted RBP eCLIP17.05■□□□□ 0.325e-6■□□□□ 9.6
SRPK1-201ENST00000346162 MCUR1Q96AQ8 359 aa17.05■□□□□ 0.32
SRPK1-201ENST00000346162 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.05■□□□□ 0.32
SRPK1-201ENST00000346162 BIN2Q9UBW5 565 aaPredicted RBP17.05■□□□□ 0.32
SRPK1-201ENST00000346162 TADA3O75528 432 aa17.05■□□□□ 0.32
SRPK1-201ENST00000346162 FMNL1O95466 1100 aaPredicted RBP17.05■□□□□ 0.32
SRPK1-201ENST00000346162 EPB41P11171 864 aaKnown RBP17.05■□□□□ 0.32
SRPK1-201ENST00000346162 CCDC84Q86UT8 332 aaPredicted RBP17.05■□□□□ 0.32
SRPK1-201ENST00000346162 LCORLQ8N3X6 602 aa17.05■□□□□ 0.32
SRPK1-201ENST00000346162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.05■□□□□ 0.32
SRPK1-201ENST00000346162 UIMC1Q96RL1 719 aa17.05■□□□□ 0.32
SRPK1-201ENST00000346162 SH2D4AQ9H788 454 aa17.05■□□□□ 0.32
SRPK1-201ENST00000346162 PIH1D3Q9NQM4 214 aaKnown RBP17.05■□□□□ 0.32
SRPK1-201ENST00000346162 PSD3Q9NYI0 1048 aa17.05■□□□□ 0.32
SRPK1-201ENST00000346162 TSKSQ9UJT2 592 aa17.05■□□□□ 0.32
SRPK1-201ENST00000346162 ENC1O14682 589 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 CHMP2AO43633 222 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 ATP5DP30049 168 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 TRIM31Q9BZY9 425 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 INO80Q9ULG1 1556 aaPredicted RBP17.04■□□□□ 0.32
SRPK1-201ENST00000346162 HNRNPH1P31943 449 aaKnown RBP17.04■□□□□ 0.32
SRPK1-201ENST00000346162 PLA2G4AP47712 749 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 MYO1EQ12965 1108 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 PDE1CQ14123 709 aaPredicted RBP17.04■□□□□ 0.32
SRPK1-201ENST00000346162 HAUS4Q9H6D7 363 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms