RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 SHISA4Q96DD7 197 aa21.31■■□□□ 1
SPSB3-201ENST00000301717 MYL10Q9BUA6 226 aa21.31■■□□□ 1
SPSB3-201ENST00000301717 LY9Q9HBG7 655 aa21.31■■□□□ 1
SPSB3-201ENST00000301717 ERICH2A1L162 156 aa21.3■■□□□ 1
SPSB3-201ENST00000301717 CPA1P15085 419 aa21.3■■□□□ 1
SPSB3-201ENST00000301717 CCND3P30281 292 aaPredicted RBP21.3■■□□□ 1
SPSB3-201ENST00000301717 OAZ1P54368 228 aa21.3■■□□□ 1
SPSB3-201ENST00000301717 RAB11FIP4Q86YS3 637 aa21.3■■□□□ 1
SPSB3-201ENST00000301717 DEFB118Q96PH6 123 aa21.3■■□□□ 1
SPSB3-201ENST00000301717 RNF146Q9NTX7 359 aa21.3■■□□□ 1
SPSB3-201ENST00000301717 CCPG1Q9ULG6 757 aa21.3■■□□□ 1
SPSB3-201ENST00000301717 SH2B2O14492 632 aaPredicted RBP21.29■■□□□ 1
SPSB3-201ENST00000301717 PARP1P09874 1014 aaKnown RBP21.29■■□□□ 1
SPSB3-201ENST00000301717 MCM5P33992 734 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 RGS19P49795 217 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 SLC35G1Q2M3R5 365 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 GPATCH4Q5T3I0 446 aaKnown RBP21.29■■□□□ 1
SPSB3-201ENST00000301717 MAP3K21Q5TCX8 1036 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 RNF20Q5VTR2 975 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 ABRAQ8N0Z2 381 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 MAML3Q96JK9 1138 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 TRERF1Q96PN7 1200 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.29■■□□□ 18e-12■■■■■ 36
SPSB3-201ENST00000301717 VAT1LQ9HCJ6 419 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 MAD2L2Q9UI95 211 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 ZNF236Q9UL36 1845 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 FDX1P10109 184 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 COPB2P35606 906 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 SART3Q15020 963 aaKnown RBP21.29■■□□□ 1
SPSB3-201ENST00000301717 ZNF792Q3KQV3 632 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 ASPRV1Q53RT3 343 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 ADGRF4Q8IZF3 695 aa21.29■■□□□ 1
SPSB3-201ENST00000301717 PAK6Q9NQU5 681 aaPredicted RBP21.29■■□□□ 1
SPSB3-201ENST00000301717 IGHA2P01877 340 aa21.28■■□□□ 1
SPSB3-201ENST00000301717 ICAM1P05362 532 aa21.28■■□□□ 1
SPSB3-201ENST00000301717 GJB1P08034 283 aa21.28■■□□□ 1
SPSB3-201ENST00000301717 TROAPQ12815 778 aa21.28■■□□□ 1
SPSB3-201ENST00000301717 PRAMEF19Q5SWL8 479 aa21.28■■□□□ 1
SPSB3-201ENST00000301717 ANKRD35Q8N283 1001 aa21.28■■□□□ 1
SPSB3-201ENST00000301717 TRPV1Q8NER1 839 aa21.28■■□□□ 1
SPSB3-201ENST00000301717 CHST13Q8NET6 341 aa21.28■■□□□ 1
SPSB3-201ENST00000301717 U2AF1L4Q8WU68 220 aaKnown RBP21.28■■□□□ 1
SPSB3-201ENST00000301717 NUP133Q8WUM0 1156 aa21.28■■□□□ 1
SPSB3-201ENST00000301717 DDX11Q96FC9 970 aa21.28■■□□□ 1
SPSB3-201ENST00000301717 NEK1Q96PY6 1258 aa21.28■■□□□ 1
SPSB3-201ENST00000301717 HMX1Q9NP08 348 aaPredicted RBP21.28■■□□□ 1
SPSB3-201ENST00000301717 SNX14Q9Y5W7 946 aa21.28■■□□□ 1
SPSB3-201ENST00000301717 DHX16O60231 1041 aaKnown RBP21.27■■□□□ 1
SPSB3-201ENST00000301717 RXRAP19793 462 aa21.27■■□□□ 1
SPSB3-201ENST00000301717 HSPA4P34932 840 aa21.27■■□□□ 1
SPSB3-201ENST00000301717 CDC37Q16543 378 aaPredicted RBP21.27■■□□□ 1
SPSB3-201ENST00000301717 USH1GQ495M9 461 aa21.27■■□□□ 1
SPSB3-201ENST00000301717 MFSD14CQ5VZR4 134 aa21.27■■□□□ 1
SPSB3-201ENST00000301717 TRMT44Q8IYL2 757 aaKnown RBP21.27■■□□□ 1
SPSB3-201ENST00000301717 PURBQ96QR8 312 aaKnown RBP21.27■■□□□ 1
SPSB3-201ENST00000301717 ACAD9Q9H845 621 aa21.27■■□□□ 1
SPSB3-201ENST00000301717 A1CFQ9NQ94 594 aaKnown RBP21.27■■□□□ 1
SPSB3-201ENST00000301717 DDX49Q9Y6V7 483 aaKnown RBP21.27■■□□□ 1
SPSB3-201ENST00000301717 RPTORQ8N122 1335 aa21.27■□□□□ 0.99
SPSB3-201ENST00000301717 SMCHD1A6NHR9 2005 aa21.26■□□□□ 0.99
SPSB3-201ENST00000301717 DNAJC25-GNG10A0A024R161 153 aa21.26■□□□□ 0.99
SPSB3-201ENST00000301717 PALM3A6NDB9 673 aaPredicted RBP21.26■□□□□ 0.99
SPSB3-201ENST00000301717 KLRF2D3W0D1 207 aa21.26■□□□□ 0.99
SPSB3-201ENST00000301717 NFIBO00712 420 aa21.26■□□□□ 0.99
SPSB3-201ENST00000301717 REC8O95072 547 aa21.26■□□□□ 0.99
SPSB3-201ENST00000301717 GJA8P48165 433 aa21.26■□□□□ 0.99
SPSB3-201ENST00000301717 CNTN2Q02246 1040 aa21.26■□□□□ 0.99
SPSB3-201ENST00000301717 GRM4Q14833 912 aa21.26■□□□□ 0.99
SPSB3-201ENST00000301717 ZNF654Q8IZM8 581 aa21.26■□□□□ 0.99
SPSB3-201ENST00000301717 FGD4Q96M96 766 aa21.26■□□□□ 0.99
SPSB3-201ENST00000301717 JMJD4Q9H9V9 463 aa21.26■□□□□ 0.99
SPSB3-201ENST00000301717 TSGA10IPQ3SY00 556 aa21.25■□□□□ 0.99
SPSB3-201ENST00000301717 OLFML2BQ68BL8 750 aa21.25■□□□□ 0.99
SPSB3-201ENST00000301717 NFXL1Q6ZNB6 911 aa21.25■□□□□ 0.99
SPSB3-201ENST00000301717 CATIPQ7Z7H3 387 aa21.25■□□□□ 0.99
SPSB3-201ENST00000301717 CCDC144CPQ8IYA2 1237 aa21.25■□□□□ 0.99
SPSB3-201ENST00000301717 KCNB2Q92953 911 aa21.25■□□□□ 0.99
SPSB3-201ENST00000301717 FBXO40Q9UH90 709 aa21.25■□□□□ 0.99
SPSB3-201ENST00000301717 RBBP6Q7Z6E9 1792 aaKnown RBP21.24■□□□□ 0.99
SPSB3-201ENST00000301717 SGPL1O95470 568 aa21.24■□□□□ 0.99
SPSB3-201ENST00000301717 QRICH1Q2TAL8 776 aa21.24■□□□□ 0.99
SPSB3-201ENST00000301717 NSMFQ6X4W1 530 aa21.24■□□□□ 0.99
SPSB3-201ENST00000301717 CLEC4DQ8WXI8 215 aa21.24■□□□□ 0.99
SPSB3-201ENST00000301717 PIBF1Q8WXW3 757 aa21.24■□□□□ 0.99
SPSB3-201ENST00000301717 TMEM87BQ96K49 555 aa21.24■□□□□ 0.99
SPSB3-201ENST00000301717 JAKMIP1Q96N16 626 aaKnown RBP21.24■□□□□ 0.99
SPSB3-201ENST00000301717 SLC5A4Q9NY91 659 aa21.24■□□□□ 0.99
SPSB3-201ENST00000301717 TNRC18O15417 2968 aaPredicted RBP21.24■□□□□ 0.99
SPSB3-201ENST00000301717 CNGA1P29973 690 aa21.23■□□□□ 0.99
SPSB3-201ENST00000301717 EXOSC10Q01780 885 aaKnown RBP21.23■□□□□ 0.99
SPSB3-201ENST00000301717 MLLT1Q03111 559 aaPredicted RBP21.23■□□□□ 0.99
SPSB3-201ENST00000301717 TKFCQ3LXA3 575 aa21.23■□□□□ 0.99
SPSB3-201ENST00000301717 ANO1Q5XXA6 986 aa21.23■□□□□ 0.99
SPSB3-201ENST00000301717 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.23■□□□□ 0.99
SPSB3-201ENST00000301717 USP26Q9BXU7 913 aa21.23■□□□□ 0.99
SPSB3-201ENST00000301717 ASTN1O14525 1302 aa21.23■□□□□ 0.99
SPSB3-201ENST00000301717 ZNFX1Q9P2E3 1918 aaKnown RBP21.23■□□□□ 0.99
SPSB3-201ENST00000301717 CCDC69A6NI79 296 aa21.22■□□□□ 0.99
SPSB3-201ENST00000301717 CYTH3O43739 400 aa21.22■□□□□ 0.99
SPSB3-201ENST00000301717 PPP1R11O60927 126 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms