RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 DDX11Q96FC9 970 aa29.41■■■□□ 2.3
PDF-201ENST00000288022 DEFB118Q96PH6 123 aa29.41■■■□□ 2.3
PDF-201ENST00000288022 RANBP17Q9H2T7 1088 aaKnown RBP29.41■■■□□ 2.3
PDF-201ENST00000288022 PARP1P09874 1014 aaKnown RBP29.4■■■□□ 2.3
PDF-201ENST00000288022 ALAS1P13196 640 aa29.4■■■□□ 2.3
PDF-201ENST00000288022 ANTXR2P58335 489 aa29.4■■■□□ 2.3
PDF-201ENST00000288022 ASPRV1Q53RT3 343 aa29.4■■■□□ 2.3
PDF-201ENST00000288022 U2AF1L4Q8WU68 220 aaKnown RBP29.4■■■□□ 2.3
PDF-201ENST00000288022 RNF146Q9NTX7 359 aa29.4■■■□□ 2.3
PDF-201ENST00000288022 CCPG1Q9ULG6 757 aa29.4■■■□□ 2.3
PDF-201ENST00000288022 CYP2C19P33261 490 aa29.39■■■□□ 2.3
PDF-201ENST00000288022 GJA8P48165 433 aa29.39■■■□□ 2.3
PDF-201ENST00000288022 MAP3K21Q5TCX8 1036 aa29.39■■■□□ 2.3
PDF-201ENST00000288022 OLFML2BQ68BL8 750 aa29.39■■■□□ 2.3
PDF-201ENST00000288022 ANKRD35Q8N283 1001 aa29.39■■■□□ 2.3
PDF-201ENST00000288022 UBA5Q9GZZ9 404 aa29.39■■■□□ 2.3
PDF-201ENST00000288022 ACAD9Q9H845 621 aa29.39■■■□□ 2.3
PDF-201ENST00000288022 PAK6Q9NQU5 681 aaPredicted RBP29.39■■■□□ 2.3
PDF-201ENST00000288022 ZNFX1Q9P2E3 1918 aaKnown RBP29.39■■■□□ 2.3
PDF-201ENST00000288022 PRC1O43663 620 aa29.38■■■□□ 2.29
PDF-201ENST00000288022 ICAM1P05362 532 aa29.38■■■□□ 2.29
PDF-201ENST00000288022 MCM5P33992 734 aa29.38■■■□□ 2.29
PDF-201ENST00000288022 TKFCQ3LXA3 575 aa29.38■■■□□ 2.29
PDF-201ENST00000288022 MAML3Q96JK9 1138 aa29.38■■■□□ 2.29
PDF-201ENST00000288022 TRERF1Q96PN7 1200 aa29.38■■■□□ 2.29
PDF-201ENST00000288022 CPVLQ9H3G5 476 aa29.38■■■□□ 2.29
PDF-201ENST00000288022 REC8O95072 547 aa29.37■■■□□ 2.29
PDF-201ENST00000288022 SGPL1O95470 568 aa29.37■■■□□ 2.29
PDF-201ENST00000288022 SENP2Q9HC62 589 aa29.37■■■□□ 2.29
PDF-201ENST00000288022 KIAA0100Q14667 2235 aaKnown RBP29.37■■■□□ 2.29
PDF-201ENST00000288022 DHX16O60231 1041 aaKnown RBP29.36■■■□□ 2.29
PDF-201ENST00000288022 TFRCP02786 760 aaKnown RBP29.36■■■□□ 2.29
PDF-201ENST00000288022 ZNF792Q3KQV3 632 aa29.36■■■□□ 2.29
PDF-201ENST00000288022 SHISA4Q96DD7 197 aa29.36■■■□□ 2.29
PDF-201ENST00000288022 TAL1P17542 331 aaPredicted RBP29.35■■■□□ 2.29
PDF-201ENST00000288022 CCND3P30281 292 aaPredicted RBP29.35■■■□□ 2.29
PDF-201ENST00000288022 IGDCC4Q8TDY8 1250 aa29.35■■■□□ 2.29
PDF-201ENST00000288022 PLXNA1Q9UIW2 1896 aa29.35■■■□□ 2.29
PDF-201ENST00000288022 CNGA1P29973 690 aa29.34■■■□□ 2.29
PDF-201ENST00000288022 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.34■■■□□ 2.29
PDF-201ENST00000288022 CATIPQ7Z7H3 387 aa29.34■■■□□ 2.29
PDF-201ENST00000288022 DIS3Q9Y2L1 958 aaKnown RBP29.34■■■□□ 2.29
PDF-201ENST00000288022 NFXL1Q6ZNB6 911 aa29.33■■■□□ 2.29
PDF-201ENST00000288022 ADGRF4Q8IZF3 695 aa29.33■■■□□ 2.29
PDF-201ENST00000288022 STAG2Q8N3U4 1231 aa29.33■■■□□ 2.29
PDF-201ENST00000288022 TMEM87BQ96K49 555 aa29.33■■■□□ 2.29
PDF-201ENST00000288022 NEK1Q96PY6 1258 aa29.33■■■□□ 2.29
PDF-201ENST00000288022 MTA3Q9BTC8 594 aa29.33■■■□□ 2.29
PDF-201ENST00000288022 LY9Q9HBG7 655 aa29.33■■■□□ 2.29
PDF-201ENST00000288022 GPHNQ9NQX3 736 aaPredicted RBP29.33■■■□□ 2.29
PDF-201ENST00000288022 PNMA2Q9UL42 364 aa29.33■■■□□ 2.29
PDF-201ENST00000288022 COL9A3Q14050 684 aaPredicted RBP29.32■■■□□ 2.28
PDF-201ENST00000288022 KRT32Q14532 448 aa29.32■■■□□ 2.28
PDF-201ENST00000288022 MUM1L1Q5H9M0 696 aa29.32■■■□□ 2.28
PDF-201ENST00000288022 RASEFQ8IZ41 740 aa29.32■■■□□ 2.28
PDF-201ENST00000288022 VAT1LQ9HCJ6 419 aa29.32■■■□□ 2.28
PDF-201ENST00000288022 DNAJC25-GNG10A0A024R161 153 aa29.31■■■□□ 2.28
PDF-201ENST00000288022 KLRF2D3W0D1 207 aa29.31■■■□□ 2.28
PDF-201ENST00000288022 IGHA2P01877 340 aa29.31■■■□□ 2.28
PDF-201ENST00000288022 GRM4Q14833 912 aa29.31■■■□□ 2.28
PDF-201ENST00000288022 CDC37Q16543 378 aaPredicted RBP29.31■■■□□ 2.28
PDF-201ENST00000288022 NSMFQ6X4W1 530 aa29.31■■■□□ 2.28
PDF-201ENST00000288022 A1CFQ9NQ94 594 aaKnown RBP29.31■■■□□ 2.28
PDF-201ENST00000288022 MAD2L2Q9UI95 211 aa29.31■■■□□ 2.28
PDF-201ENST00000288022 PFASO15067 1338 aa29.3■■■□□ 2.28
PDF-201ENST00000288022 WDR19Q8NEZ3 1342 aa29.3■■■□□ 2.28
PDF-201ENST00000288022 CCDC69A6NI79 296 aa29.3■■■□□ 2.28
PDF-201ENST00000288022 POTEB2H3BUK9 544 aa29.3■■■□□ 2.28
PDF-201ENST00000288022 SH2B2O14492 632 aaPredicted RBP29.3■■■□□ 2.28
PDF-201ENST00000288022 CYBAP13498 195 aa29.3■■■□□ 2.28
PDF-201ENST00000288022 TSGA10IPQ3SY00 556 aa29.3■■■□□ 2.28
PDF-201ENST00000288022 TMTC2Q8N394 836 aa29.3■■■□□ 2.28
PDF-201ENST00000288022 NUP133Q8WUM0 1156 aa29.3■■■□□ 2.28
PDF-201ENST00000288022 TINF2Q9BSI4 451 aa29.3■■■□□ 2.28
PDF-201ENST00000288022 LRRC2Q9BYS8 371 aa29.3■■■□□ 2.28
PDF-201ENST00000288022 CRISPLD2Q9H0B8 497 aa29.3■■■□□ 2.28
PDF-201ENST00000288022 PALM3A6NDB9 673 aaPredicted RBP29.29■■■□□ 2.28
PDF-201ENST00000288022 TROAPQ12815 778 aa29.29■■■□□ 2.28
PDF-201ENST00000288022 ADCK5Q3MIX3 580 aa29.29■■■□□ 2.28
PDF-201ENST00000288022 USH1GQ495M9 461 aa29.29■■■□□ 2.28
PDF-201ENST00000288022 PRAMEF19Q5SWL8 479 aa29.29■■■□□ 2.28
PDF-201ENST00000288022 ZNF654Q8IZM8 581 aa29.29■■■□□ 2.28
PDF-201ENST00000288022 TRPV1Q8NER1 839 aa29.29■■■□□ 2.28
PDF-201ENST00000288022 CAPN2P17655 700 aa29.28■■■□□ 2.28
PDF-201ENST00000288022 HSPA4P34932 840 aa29.28■■■□□ 2.28
PDF-201ENST00000288022 CNTN2Q02246 1040 aa29.28■■■□□ 2.28
PDF-201ENST00000288022 MYL10Q9BUA6 226 aa29.28■■■□□ 2.28
PDF-201ENST00000288022 JMJD4Q9H9V9 463 aa29.28■■■□□ 2.28
PDF-201ENST00000288022 FARP2O94887 1054 aaPredicted RBP29.27■■■□□ 2.28
PDF-201ENST00000288022 DDX20Q9UHI6 824 aaKnown RBP29.27■■■□□ 2.28
PDF-201ENST00000288022 CNPY2Q9Y2B0 182 aa29.27■■■□□ 2.28
PDF-201ENST00000288022 NFIBO00712 420 aa29.26■■■□□ 2.27
PDF-201ENST00000288022 DDAH1O94760 285 aa29.26■■■□□ 2.27
PDF-201ENST00000288022 LIFRP42702 1097 aa29.26■■■□□ 2.27
PDF-201ENST00000288022 QRICH1Q2TAL8 776 aa29.26■■■□□ 2.27
PDF-201ENST00000288022 DHX32Q7L7V1 743 aaKnown RBP29.26■■■□□ 2.27
PDF-201ENST00000288022 ZNF467Q7Z7K2 595 aaPredicted RBP29.26■■■□□ 2.27
PDF-201ENST00000288022 MSL3Q8N5Y2 521 aaKnown RBP29.26■■■□□ 2.27
PDF-201ENST00000288022 CTCFLQ8NI51 663 aaPredicted RBP29.26■■■□□ 2.27
PDF-201ENST00000288022 CYP39A1Q9NYL5 469 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms