RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 NAM9P27929 486 aa1.55□□□□□ -2.16
snR49snR49 SAM50P53969 484 aa1.55□□□□□ -2.16
snR49snR49 YOR387CQ08910 206 aa1.55□□□□□ -2.16
snR49snR49 ISY1P21374 235 aaPredicted RBP1.54□□□□□ -2.16
snR49snR49 SEC62P21825 274 aa1.54□□□□□ -2.16
snR49snR49 SAC6P32599 642 aaKnown RBP1.54□□□□□ -2.16
snR49snR49 ECM15P35195 104 aa1.54□□□□□ -2.16
snR49snR49 FPR3P38911 411 aaKnown RBP1.54□□□□□ -2.16
snR49snR49 YIL161WP40449 235 aaKnown RBP1.54□□□□□ -2.16
snR49snR49 ERR3P42222 437 aa1.54□□□□□ -2.16
snR49snR49 WSC2P53832 503 aa1.54□□□□□ -2.16
snR49snR49 EIS1Q05050 843 aaKnown RBP1.54□□□□□ -2.16
snR49snR49 VAM6Q07468 1049 aa1.54□□□□□ -2.16
snR49snR49 THI20Q08224 551 aa1.54□□□□□ -2.16
snR49snR49 RRP12Q12754 1228 aaKnown RBP1.54□□□□□ -2.16
snR49snR49 SPT15P13393 240 aaKnown RBP1.53□□□□□ -2.16
snR49snR49 YME1P32795 747 aa1.53□□□□□ -2.16
snR49snR49 VPS17P32913 551 aa1.53□□□□□ -2.16
snR49snR49 PMU1P36069 295 aa1.53□□□□□ -2.16
snR49snR49 TUL1P36096 758 aa1.53□□□□□ -2.16
snR49snR49 SWD3P38123 315 aa1.53□□□□□ -2.16
snR49snR49 UBA4P38820 440 aa1.53□□□□□ -2.16
snR49snR49 CTF18P49956 741 aa1.53□□□□□ -2.16
snR49snR49 PEX14P53112 341 aa1.53□□□□□ -2.16
snR49snR49 YGL082WP53155 381 aa1.53□□□□□ -2.16
snR49snR49 NNF2P53253 936 aa1.53□□□□□ -2.16
snR49snR49 MSO1P53604 210 aaKnown RBP1.53□□□□□ -2.16
snR49snR49 MOT3P54785 490 aaKnown RBP1.53□□□□□ -2.16
snR49snR49 RNY1Q02933 434 aaKnown RBP1.53□□□□□ -2.16
snR49snR49 DIC1Q06143 298 aa1.53□□□□□ -2.16
snR49snR49 CSR1Q06705 408 aaKnown RBP1.53□□□□□ -2.16
snR49snR49 YOL057WQ08225 711 aa1.53□□□□□ -2.16
snR49snR49 SNF3P10870 884 aa1.52□□□□□ -2.17
snR49snR49 SPO16P17122 198 aa1.52□□□□□ -2.17
snR49snR49 YCR022CP25620 114 aa1.52□□□□□ -2.17
snR49snR49 DEG1P31115 442 aaKnown RBP1.52□□□□□ -2.17
snR49snR49 YNK1P36010 153 aaKnown RBP1.52□□□□□ -2.17
snR49snR49 FSH1P38777 243 aaKnown RBP1.52□□□□□ -2.17
snR49snR49 RRP6Q12149 733 aaKnown RBP1.52□□□□□ -2.17
snR49snR49 PGS1P25578 521 aa1.51□□□□□ -2.17
snR49snR49 CMK1P27466 446 aaKnown RBP1.51□□□□□ -2.17
snR49snR49 FUN19P28003 413 aaPredicted RBP1.51□□□□□ -2.17
snR49snR49 SNC1P31109 117 aa1.51□□□□□ -2.17
snR49snR49 ESL2P36168 1195 aa1.51□□□□□ -2.17
snR49snR49 VPS52P39904 641 aa1.51□□□□□ -2.17
snR49snR49 YGR210CP42942 411 aa1.51□□□□□ -2.17
snR49snR49 RRG7Q08774 242 aaPredicted RBP1.51□□□□□ -2.17
snR49snR49 TMS1Q12116 473 aa1.51□□□□□ -2.17
snR49snR49 HRT3Q12347 344 aa1.51□□□□□ -2.17
snR49snR49 ATR1P13090 542 aa1.5□□□□□ -2.17
snR49snR49 NPR2P39923 615 aa1.5□□□□□ -2.17
snR49snR49 SSK1Q07084 712 aa1.5□□□□□ -2.17
snR49snR49 ATP2P00830 511 aaKnown RBP1.49□□□□□ -2.17
snR49snR49 MIS1P09440 975 aaKnown RBP1.49□□□□□ -2.17
snR49snR49 CLN3P13365 580 aa1.49□□□□□ -2.17
snR49snR49 YBL059WP34224 193 aa1.49□□□□□ -2.17
snR49snR49 APM3P38153 483 aa1.49□□□□□ -2.17
snR49snR49 YBR138CP38277 524 aa1.49□□□□□ -2.17
snR49snR49 NDT80P38830 627 aa1.49□□□□□ -2.17
snR49snR49 PKP1P40530 394 aa1.49□□□□□ -2.17
snR49snR49 SMC3P47037 1230 aa1.49□□□□□ -2.17
snR49snR49 CPR6P53691 371 aaKnown RBP1.49□□□□□ -2.17
snR49snR49 IST1P53843 298 aaPredicted RBP1.49□□□□□ -2.17
snR49snR49 TEP1P53916 434 aa1.49□□□□□ -2.17
snR49snR49 ATG9Q12142 997 aa1.49□□□□□ -2.17
snR49snR49 ERV2Q12284 196 aa1.49□□□□□ -2.17
snR49snR49 YOL114CQ12322 202 aa1.49□□□□□ -2.17
snR49snR49 AMD1P15274 810 aaKnown RBP1.48□□□□□ -2.17
snR49snR49 SRB5P32585 307 aa1.48□□□□□ -2.17
snR49snR49 PAD1P33751 242 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
snR49snR49 NUP120P35729 1037 aa1.48□□□□□ -2.17
snR49snR49 ANS1P38832 159 aa1.48□□□□□ -2.17
snR49snR49 STR3P53101 465 aaKnown RBP1.48□□□□□ -2.17
snR49snR49 ELP3Q02908 557 aaKnown RBP1.48□□□□□ -2.17
snR49snR49 RLI1Q03195 608 aaKnown RBP1.48□□□□□ -2.17
snR49snR49 TRS130Q03660 1102 aa1.48□□□□□ -2.17
snR49snR49 ENT4Q07872 247 aa1.48□□□□□ -2.17
snR49snR49 RBD2Q12270 262 aa1.48□□□□□ -2.17
snR49snR49 LCB1P25045 558 aaKnown RBP1.47□□□□□ -2.17
snR49snR49 RNA14P25298 677 aaKnown RBP1.47□□□□□ -2.17
snR49snR49 ROT2P38138 954 aa1.47□□□□□ -2.17
snR49snR49 LAG1P38703 411 aa1.47□□□□□ -2.17
snR49snR49 SHO1P40073 367 aa1.47□□□□□ -2.17
snR49snR49 SNG1P46950 547 aa1.47□□□□□ -2.17
snR49snR49 SYO1Q07395 620 aa1.47□□□□□ -2.17
snR49snR49 APL4Q12028 832 aa1.47□□□□□ -2.17
snR49snR49 FAB1P34756 2278 aa1.46□□□□□ -2.18
snR49snR49 ADH2P00331 348 aaKnown RBP1.46□□□□□ -2.18
snR49snR49 PIF1P07271 859 aa1.46□□□□□ -2.18
snR49snR49 PUT3P25502 979 aaPredicted RBP1.46□□□□□ -2.18
snR49snR49 CBF2P32504 956 aa1.46□□□□□ -2.18
snR49snR49 SPC72P39723 622 aa1.46□□□□□ -2.18
snR49snR49 CSM2P40465 213 aa1.46□□□□□ -2.18
snR49snR49 PYK2P52489 506 aaKnown RBP1.46□□□□□ -2.18
snR49snR49 CSL4P53859 292 aaPredicted RBP1.46□□□□□ -2.18
snR49snR49 IGO1P53897 168 aa1.46□□□□□ -2.18
snR49snR49 INN1P53901 409 aa1.46□□□□□ -2.18
snR49snR49 YPL014WQ02606 381 aa1.46□□□□□ -2.18
snR49snR49 MRPL35Q06678 367 aa1.46□□□□□ -2.18
snR49snR49 TMA16Q08687 178 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms