RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 YJR154WP47181 346 aa-1.6□□□□□ -2.67
snR40snR40 MIX17Q03667 156 aa-1.6□□□□□ -2.67
snR40snR40 FPR4Q06205 392 aaPredicted RBP-1.6□□□□□ -2.67
snR40snR40 VAM6Q07468 1049 aa-1.6□□□□□ -2.67
snR40snR40 THI20Q08224 551 aa-1.6□□□□□ -2.67
snR40snR40 RPS17AP02407 136 aaKnown RBP-1.61□□□□□ -2.67
snR40snR40 CHS1P08004 1131 aa-1.61□□□□□ -2.67
snR40snR40 RPS17BP14127 136 aaKnown RBP-1.61□□□□□ -2.67
snR40snR40 APA1P16550 321 aaKnown RBP-1.61□□□□□ -2.67
snR40snR40 VPS17P32913 551 aa-1.61□□□□□ -2.67
snR40snR40 MAL31P38156 614 aa-1.61□□□□□ -2.67
snR40snR40 PFS1P38872 237 aa-1.61□□□□□ -2.67
snR40snR40 RIC1P40395 1056 aa-1.61□□□□□ -2.67
snR40snR40 COS12P53053 380 aa-1.61□□□□□ -2.67
snR40snR40 SAM50P53969 484 aa-1.61□□□□□ -2.67
snR40snR40 TRM44Q02648 567 aaKnown RBP-1.61□□□□□ -2.67
snR40snR40 PNG1Q02890 363 aa-1.61□□□□□ -2.67
snR40snR40 SKY1Q03656 742 aa-1.61□□□□□ -2.67
snR40snR40 DNL4Q08387 944 aaPredicted RBP-1.61□□□□□ -2.67
snR40snR40 YOR012WQ12351 137 aa-1.61□□□□□ -2.67
snR40snR40 EAF3Q12432 401 aa-1.61□□□□□ -2.67
snR40snR40 UBR2Q07963 1872 aa-1.61□□□□□ -2.67
snR40snR40 HIP1P06775 603 aa-1.62□□□□□ -2.67
snR40snR40 BIK1P11709 440 aa-1.62□□□□□ -2.67
snR40snR40 SIP1P32578 815 aa-1.62□□□□□ -2.67
snR40snR40 YEL043WP32618 956 aa-1.62□□□□□ -2.67
snR40snR40 MSG5P38590 489 aa-1.62□□□□□ -2.67
snR40snR40 DFG10P40526 253 aa-1.62□□□□□ -2.67
snR40snR40 IES1P43579 692 aa-1.62□□□□□ -2.67
snR40snR40 NPA3P47122 385 aa-1.62□□□□□ -2.67
snR40snR40 PKP2P53170 491 aa-1.62□□□□□ -2.67
snR40snR40 ERP6P53198 216 aa-1.62□□□□□ -2.67
snR40snR40 AIM36Q03798 255 aa-1.62□□□□□ -2.67
snR40snR40 CDD1Q06549 142 aa-1.62□□□□□ -2.67
snR40snR40 YPR022CQ12139 1133 aa-1.62□□□□□ -2.67
snR40snR40 CHO1P08456 276 aa-1.63□□□□□ -2.67
snR40snR40 SUI3P09064 285 aaKnown RBP-1.63□□□□□ -2.67
snR40snR40 CLB2P24869 491 aa-1.63□□□□□ -2.67
snR40snR40 RPL8BP29453 256 aaKnown RBP-1.63□□□□□ -2.67
snR40snR40 HOG1P32485 435 aa-1.63□□□□□ -2.67
snR40snR40 SRB2P34162 210 aa-1.63□□□□□ -2.67
snR40snR40 KEL1P38853 1164 aaKnown RBP-1.63□□□□□ -2.67
snR40snR40 VPS52P39904 641 aa-1.63□□□□□ -2.67
snR40snR40 MAD1P40957 749 aa-1.63□□□□□ -2.67
snR40snR40 YDL124WQ07551 312 aaKnown RBP-1.63□□□□□ -2.67
snR40snR40 RRP6Q12149 733 aaKnown RBP-1.63□□□□□ -2.67
snR40snR40 TKL1P23254 680 aaKnown RBP-1.64□□□□□ -2.67
snR40snR40 RMA1P36001 430 aaKnown RBP-1.64□□□□□ -2.67
snR40snR40 PFF1P38244 976 aa-1.64□□□□□ -2.67
snR40snR40 IPL1P38991 367 aa-1.64□□□□□ -2.67
snR40snR40 SPF1P39986 1215 aaKnown RBP-1.64□□□□□ -2.67
snR40snR40 PHM8P40025 321 aa-1.64□□□□□ -2.67
snR40snR40 VPS27P40343 622 aaKnown RBP-1.64□□□□□ -2.67
snR40snR40 YIL060WP40519 144 aa-1.64□□□□□ -2.67
snR40snR40 YIR035CP40579 254 aa-1.64□□□□□ -2.67
snR40snR40 RLI1Q03195 608 aaKnown RBP-1.64□□□□□ -2.67
snR40snR40 FAR10Q06001 478 aa-1.64□□□□□ -2.67
snR40snR40 RRD2Q12461 358 aa-1.64□□□□□ -2.67
snR40snR40 CAR1P00812 333 aaKnown RBP-1.65□□□□□ -2.67
snR40snR40 SWI6P09959 803 aa-1.65□□□□□ -2.67
snR40snR40 RPS8AP0CX39 200 aaKnown RBP-1.65□□□□□ -2.67
snR40snR40 RPS8BP0CX40 200 aaKnown RBP-1.65□□□□□ -2.67
snR40snR40 SIR1P21691 654 aa-1.65□□□□□ -2.67
snR40snR40 NPL6P32832 435 aa-1.65□□□□□ -2.67
snR40snR40 AST1P35183 429 aa-1.65□□□□□ -2.67
snR40snR40 HAT2P39984 401 aa-1.65□□□□□ -2.67
snR40snR40 TIM54P47045 478 aa-1.65□□□□□ -2.67
snR40snR40 PGU1P47180 361 aa-1.65□□□□□ -2.67
snR40snR40 YIP5P53108 310 aa-1.65□□□□□ -2.67
snR40snR40 YGL081WP53156 320 aa-1.65□□□□□ -2.67
snR40snR40 PFA5Q03289 374 aa-1.65□□□□□ -2.67
snR40snR40 SSK1Q07084 712 aa-1.65□□□□□ -2.67
snR40snR40 FRE8Q12209 686 aa-1.65□□□□□ -2.67
snR40snR40 COX4P04037 155 aa-1.66□□□□□ -2.68
snR40snR40 CDC16P09798 840 aa-1.66□□□□□ -2.68
snR40snR40 AMD1P15274 810 aaKnown RBP-1.66□□□□□ -2.68
snR40snR40 ZUO1P32527 433 aaKnown RBP-1.66□□□□□ -2.68
snR40snR40 REC114P32841 428 aa-1.66□□□□□ -2.68
snR40snR40 BET3P36149 193 aa-1.66□□□□□ -2.68
snR40snR40 TYS1P36421 394 aaKnown RBP-1.66□□□□□ -2.68
snR40snR40 SSF1P38789 453 aaPredicted RBP-1.66□□□□□ -2.68
snR40snR40 WSS1P38838 269 aa-1.66□□□□□ -2.68
snR40snR40 POP2P39008 433 aa-1.66□□□□□ -2.68
snR40snR40 PCF11P39081 626 aaPredicted RBP-1.66□□□□□ -2.68
snR40snR40 AIM10P39965 576 aaKnown RBP-1.66□□□□□ -2.68
snR40snR40 RPL37AP49166 88 aaKnown RBP-1.66□□□□□ -2.68
snR40snR40 TAF8Q03750 510 aa-1.66□□□□□ -2.68
snR40snR40 AAD4Q07747 329 aa-1.66□□□□□ -2.68
snR40snR40 YLR108CQ12259 485 aa-1.66□□□□□ -2.68
snR40snR40 COX1P00401 534 aa-1.67□□□□□ -2.68
snR40snR40 YAK1P14680 807 aa-1.67□□□□□ -2.68
snR40snR40 KRS1P15180 591 aaKnown RBP-1.67□□□□□ -2.68
snR40snR40 CMK1P27466 446 aaKnown RBP-1.67□□□□□ -2.68
snR40snR40 GAC1P28006 793 aa-1.67□□□□□ -2.68
snR40snR40 SAC1P32368 623 aaKnown RBP-1.67□□□□□ -2.68
snR40snR40 YKL091CP33324 310 aaKnown RBP-1.67□□□□□ -2.68
snR40snR40 SPT10P35208 640 aa-1.67□□□□□ -2.68
snR40snR40 UME6P39001 836 aa-1.67□□□□□ -2.68
snR40snR40 EMP65P40085 556 aa-1.67□□□□□ -2.68
snR40snR40 POL32P47110 350 aa-1.67□□□□□ -2.68
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms