RNA–Protein interactions for RNA: YPR111W

DBF20, Transcript of Ser/Thr kinase involved in late nuclear division, yeast

Gene DBF20, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF20	YPR111W	PET111	P08468	800 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	RED1	P14291	827 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	FUR1	P18562	216 aa	Known RBP	3.01	□□□□□ -1.93
DBF20	YPR111W	AIM17	P23180	465 aa	Known RBP	3.01	□□□□□ -1.93
DBF20	YPR111W	ERG3	P32353	365 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	PXA2	P34230	853 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	ADE17	P38009	592 aa	Known RBP	3.01	□□□□□ -1.93
DBF20	YPR111W	FLO5	P38894	1075 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	LSM5	P40089	93 aa	Known RBP	3.01	□□□□□ -1.93
DBF20	YPR111W	ROK1	P45818	564 aa	Predicted RBP	3.01	□□□□□ -1.93
DBF20	YPR111W	DSD1	P53095	428 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	SCW4	P53334	386 aa	Known RBP	3.01	□□□□□ -1.93
DBF20	YPR111W	EAF7	P53911	425 aa	Known RBP	3.01	□□□□□ -1.93
DBF20	YPR111W	SYF1	Q04048	859 aa	Predicted RBP	3.01	□□□□□ -1.93
DBF20	YPR111W	MFB1	Q04922	465 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	UTP21	Q06078	939 aa	Predicted RBP	3.01	□□□□□ -1.93
DBF20	YPR111W	GEP3	Q08622	556 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	YBR085C-A	O43137	85 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	GAL4	P04386	881 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
DBF20	YPR111W	PDX1	P16451	410 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	ROX1	P25042	368 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	PDB1	P32473	366 aa	Known RBP	3.01	□□□□□ -1.93
DBF20	YPR111W	MNN2	P38069	597 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	MDV1	P47025	714 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	VPS25	P47142	202 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	YPT11	P48559	417 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	MRX6	P48564	524 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	LCL3	P53153	274 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	YGR066C	P53242	292 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	IST1	P53843	298 aa	Predicted RBP	3.01	□□□□□ -1.93
DBF20	YPR111W	MPS1	P54199	764 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	RPL15B	P54780	204 aa	Predicted RBP	3.01	□□□□□ -1.93
DBF20	YPR111W	RSM28	Q03430	361 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	RPC11	Q04307	110 aa	Predicted RBP	3.01	□□□□□ -1.93
DBF20	YPR111W	SKG3	Q06315	1026 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	POS5	Q06892	414 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	GRC3	Q07845	632 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	ETT1	Q08421	412 aa	Known RBP	3.01	□□□□□ -1.93
DBF20	YPR111W	UBX3	Q12229	455 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	HER1	Q12276	1246 aa		3.01	□□□□□ -1.93
DBF20	YPR111W	YER145C-A	A0A023PYF4	145 aa		3	□□□□□ -1.93
DBF20	YPR111W	RPC53	P25441	422 aa		3	□□□□□ -1.93
DBF20	YPR111W	POL4	P25615	582 aa		3	□□□□□ -1.93
DBF20	YPR111W	VMA8	P32610	256 aa	Known RBP	3	□□□□□ -1.93
DBF20	YPR111W	TOA1	P32773	286 aa		3	□□□□□ -1.93
DBF20	YPR111W	RPS0A	P32905	252 aa	Known RBP	3	□□□□□ -1.93
DBF20	YPR111W	MAL33	P38157	468 aa		3	□□□□□ -1.93
DBF20	YPR111W	RTS1	P38903	757 aa		3	□□□□□ -1.93
DBF20	YPR111W	VPS41	P38959	992 aa		3	□□□□□ -1.93
DBF20	YPR111W	ECM10	P39987	644 aa		3	□□□□□ -1.93
DBF20	YPR111W	GPD2	P41911	440 aa	Known RBP	3	□□□□□ -1.93
DBF20	YPR111W	CTK2	P46962	323 aa		3	□□□□□ -1.93
DBF20	YPR111W	JJJ1	P53863	590 aa		3	□□□□□ -1.93
DBF20	YPR111W	BOP3	P53958	396 aa		3	□□□□□ -1.93
DBF20	YPR111W	YPL068C	Q02749	293 aa		3	□□□□□ -1.93
DBF20	YPR111W	ATG9	Q12142	997 aa		3	□□□□□ -1.93
DBF20	YPR111W	YJR112W-A	Q3E743	109 aa		3	□□□□□ -1.93
DBF20	YPR111W	CLC1	P17891	233 aa		2.99	□□□□□ -1.93
DBF20	YPR111W	SWI3	P32591	825 aa		2.99	□□□□□ -1.93
DBF20	YPR111W	AGP2	P38090	596 aa		2.99	□□□□□ -1.93
DBF20	YPR111W	LRP1	P38801	184 aa	Known RBP	2.99	□□□□□ -1.93
DBF20	YPR111W	RGI2	P40188	164 aa		2.99	□□□□□ -1.93
DBF20	YPR111W	YIR016W	P40572	265 aa		2.99	□□□□□ -1.93
DBF20	YPR111W	MET28	P40573	187 aa		2.99	□□□□□ -1.93
DBF20	YPR111W	YFR020W	P43600	232 aa		2.99	□□□□□ -1.93
DBF20	YPR111W	SMC3	P47037	1230 aa		2.99	□□□□□ -1.93
DBF20	YPR111W	STR3	P53101	465 aa	Known RBP	2.99	□□□□□ -1.93
DBF20	YPR111W	CAC2	Q04199	468 aa		2.99	□□□□□ -1.93
DBF20	YPR111W	ECI1	Q05871	280 aa		2.99	□□□□□ -1.93
DBF20	YPR111W	GRX6	Q12438	231 aa		2.99	□□□□□ -1.93
DBF20	YPR111W	RTN2	Q12443	393 aa		2.99	□□□□□ -1.93
DBF20	YPR111W	ARG3	P05150	338 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	GPA1	P08539	472 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	STE50	P25344	346 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	CDC60	P26637	1090 aa	Known RBP	2.98	□□□□□ -1.93
DBF20	YPR111W	SAC1	P32368	623 aa	Known RBP	2.98	□□□□□ -1.93
DBF20	YPR111W	AUR1	P36107	401 aa	Predicted RBP	2.98	□□□□□ -1.93
DBF20	YPR111W	SRP72	P38688	640 aa	Known RBP	2.98	□□□□□ -1.93
DBF20	YPR111W	APE4	P38821	490 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	CCT6	P39079	546 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	UIP3	P39547	235 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	SPO22	P40511	975 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	IRC8	P47046	822 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	PFA5	Q03289	374 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	YEH1	Q07804	573 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	GSH2	Q08220	491 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	FRE3	Q08905	711 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	RRG1	Q12167	365 aa	Predicted RBP	2.98	□□□□□ -1.93
DBF20	YPR111W	HXK2	P04807	486 aa	Known RBP	2.98	□□□□□ -1.93
DBF20	YPR111W	RAP1	P11938	827 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	CBS1	P14066	229 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	KRS1	P15180	591 aa	Known RBP	2.98	□□□□□ -1.93
DBF20	YPR111W	OPI1	P21957	404 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	YCP4	P25349	247 aa	Known RBP	2.98	□□□□□ -1.93
DBF20	YPR111W	BYE1	P36106	594 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	PXL1	P36166	706 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	CST26	P38226	397 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	MET18	P40469	1032 aa		2.98	□□□□□ -1.93
DBF20	YPR111W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 98.7 ms