RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W NTH1P32356 751 aa10.1□□□□□ -0.79
MSF1YPR047W RIM101P33400 625 aa10.1□□□□□ -0.79
MSF1YPR047W TIP20P33891 701 aa10.1□□□□□ -0.79
MSF1YPR047W TAF14P35189 244 aa10.1□□□□□ -0.79
MSF1YPR047W DEF1P35732 738 aaKnown RBP10.1□□□□□ -0.79
MSF1YPR047W NDC80P40460 691 aa10.1□□□□□ -0.79
MSF1YPR047W ATG36P46983 293 aa10.1□□□□□ -0.79
MSF1YPR047W YGR266WP53326 701 aa10.1□□□□□ -0.79
MSF1YPR047W CUE5Q08412 411 aaKnown RBP10.1□□□□□ -0.79
MSF1YPR047W CMR1Q12510 522 aaKnown RBP10.1□□□□□ -0.79
MSF1YPR047W HSP26P15992 214 aaKnown RBP RIP-Chip data10.09□□□□□ -0.79not detected
MSF1YPR047W GDA1P32621 518 aa10.09□□□□□ -0.79
MSF1YPR047W RRP1P35178 278 aaPredicted RBP10.09□□□□□ -0.79
MSF1YPR047W SQT1P35184 431 aa10.09□□□□□ -0.79
MSF1YPR047W YHR045WP38775 560 aa10.09□□□□□ -0.79
MSF1YPR047W RSM10Q03201 203 aa10.09□□□□□ -0.79
MSF1YPR047W GUP2Q08929 609 aa10.09□□□□□ -0.79
MSF1YPR047W MCM16Q12262 181 aa10.09□□□□□ -0.79
MSF1YPR047W STT4P37297 1900 aa10.09□□□□□ -0.79
MSF1YPR047W SPO16P17122 198 aa10.08□□□□□ -0.8
MSF1YPR047W HOP1P20050 605 aa10.08□□□□□ -0.8
MSF1YPR047W PHO3P24031 467 aa10.08□□□□□ -0.8
MSF1YPR047W TPS2P31688 896 aaKnown RBP10.08□□□□□ -0.8
MSF1YPR047W ATP11P32453 318 aa10.08□□□□□ -0.8
MSF1YPR047W GCG1P32656 232 aaKnown RBP10.08□□□□□ -0.8
MSF1YPR047W YPT52P36018 234 aaKnown RBP10.08□□□□□ -0.8
MSF1YPR047W YHR020WP38708 688 aaKnown RBP10.08□□□□□ -0.8
MSF1YPR047W UBA4P38820 440 aa10.08□□□□□ -0.8
MSF1YPR047W SPG5P42933 373 aa10.08□□□□□ -0.8
MSF1YPR047W PET130P47065 347 aa10.08□□□□□ -0.8
MSF1YPR047W RIM21P48565 533 aa10.08□□□□□ -0.8
MSF1YPR047W CTK1Q03957 528 aaKnown RBP10.08□□□□□ -0.8
MSF1YPR047W VTI1Q04338 217 aa10.08□□□□□ -0.8
MSF1YPR047W NUS1Q12063 375 aa10.08□□□□□ -0.8
MSF1YPR047W DIN7Q12086 430 aa10.08□□□□□ -0.8
MSF1YPR047W HRP1Q99383 534 aaKnown RBP10.08□□□□□ -0.8
MSF1YPR047W TEF1P02994 458 aaKnown RBP10.07□□□□□ -0.8
MSF1YPR047W CMD1P06787 147 aaKnown RBP10.07□□□□□ -0.8
MSF1YPR047W CBF1P17106 351 aa10.07□□□□□ -0.8
MSF1YPR047W MSB1P21339 1137 aaKnown RBP10.07□□□□□ -0.8
MSF1YPR047W YCR006CP25350 157 aa10.07□□□□□ -0.8
MSF1YPR047W YHL008CP38750 627 aa10.07□□□□□ -0.8
MSF1YPR047W HSE1P38753 452 aa10.07□□□□□ -0.8
MSF1YPR047W UTP18P40362 594 aaPredicted RBP10.07□□□□□ -0.8
MSF1YPR047W PFA3P42836 336 aa10.07□□□□□ -0.8
MSF1YPR047W VHS1Q03785 461 aa10.07□□□□□ -0.8
MSF1YPR047W SYT1Q06836 1226 aa10.07□□□□□ -0.8
MSF1YPR047W YLR030WQ07967 263 aa10.07□□□□□ -0.8
MSF1YPR047W FRE7Q12333 620 aa10.07□□□□□ -0.8
MSF1YPR047W PTP1P25044 335 aa10.07□□□□□ -0.8
MSF1YPR047W YGL015CP33199 130 aa10.07□□□□□ -0.8
MSF1YPR047W UBC6P33296 250 aaPredicted RBP10.07□□□□□ -0.8
MSF1YPR047W LRG1P35688 1017 aa10.07□□□□□ -0.8
MSF1YPR047W YHI9P38765 294 aa10.07□□□□□ -0.8
MSF1YPR047W ALA1P40825 983 aaKnown RBP10.07□□□□□ -0.8
MSF1YPR047W SAE2P46946 345 aa10.07□□□□□ -0.8
MSF1YPR047W COG6P53959 839 aa10.07□□□□□ -0.8
MSF1YPR047W TRM12Q04235 462 aa10.07□□□□□ -0.8
MSF1YPR047W SSL1Q04673 461 aaPredicted RBP10.07□□□□□ -0.8
MSF1YPR047W RRN11Q04712 507 aa10.07□□□□□ -0.8
MSF1YPR047W CDC123Q05791 360 aa10.07□□□□□ -0.8
MSF1YPR047W BMT6Q12291 365 aa10.07□□□□□ -0.8
MSF1YPR047W PRP8P33334 2413 aaKnown RBP10.06□□□□□ -0.8
MSF1YPR047W PHO5P00635 467 aa10.06□□□□□ -0.8
MSF1YPR047W MST1P07236 462 aa10.06□□□□□ -0.8
MSF1YPR047W THI80P35202 319 aa10.06□□□□□ -0.8
MSF1YPR047W CCT4P39078 528 aaKnown RBP10.06□□□□□ -0.8
MSF1YPR047W SPP2Q02521 185 aa10.06□□□□□ -0.8
MSF1YPR047W GLE1Q12315 538 aa10.06□□□□□ -0.8
MSF1YPR047W YAR066WP0CX18 203 aa10.05□□□□□ -0.8
MSF1YPR047W YHR214WP0CX19 203 aa10.05□□□□□ -0.8
MSF1YPR047W FUR1P18562 216 aaKnown RBP10.05□□□□□ -0.8
MSF1YPR047W SEC15P22224 910 aa10.05□□□□□ -0.8
MSF1YPR047W CAB3P36076 571 aa10.05□□□□□ -0.8
MSF1YPR047W FMP46P36141 133 aaKnown RBP10.05□□□□□ -0.8
MSF1YPR047W MNN1P39106 762 aa10.05□□□□□ -0.8
MSF1YPR047W FAU1P40099 211 aa10.05□□□□□ -0.8
MSF1YPR047W GAT1P43574 510 aa10.05□□□□□ -0.8
MSF1YPR047W RRP45Q05636 305 aaKnown RBP10.05□□□□□ -0.8
MSF1YPR047W STE2D6VTK4 431 aa10.04□□□□□ -0.8
MSF1YPR047W RAD1P06777 1100 aa10.04□□□□□ -0.8
MSF1YPR047W RIM11P38615 370 aa10.04□□□□□ -0.8
MSF1YPR047W PMT3P47190 753 aa10.04□□□□□ -0.8
MSF1YPR047W SGF73P53165 657 aa10.04□□□□□ -0.8
MSF1YPR047W ADE13Q05911 482 aaKnown RBP10.04□□□□□ -0.8
MSF1YPR047W RSC2Q06488 889 aa10.04□□□□□ -0.8
MSF1YPR047W MRH1Q12117 320 aaPredicted RBP10.04□□□□□ -0.8
MSF1YPR047W UPC2Q12151 913 aa10.04□□□□□ -0.8
MSF1YPR047W LAG2Q92325 660 aa10.04□□□□□ -0.8
MSF1YPR047W ILS1P09436 1072 aaKnown RBP10.03□□□□□ -0.8
MSF1YPR047W PEP5P12868 1029 aa10.03□□□□□ -0.8
MSF1YPR047W CLB1P24868 471 aa10.03□□□□□ -0.8
MSF1YPR047W MEI5P32489 222 aa10.03□□□□□ -0.8
MSF1YPR047W MGM101P32787 269 aaKnown RBP10.03□□□□□ -0.8
MSF1YPR047W GIC1P38785 314 aa10.03□□□□□ -0.8
MSF1YPR047W PLB1P39105 664 aa10.03□□□□□ -0.8
MSF1YPR047W PTC2P39966 464 aaKnown RBP10.03□□□□□ -0.8
MSF1YPR047W HAT2P39984 401 aa10.03□□□□□ -0.8
MSF1YPR047W SPF1P39986 1215 aaKnown RBP10.03□□□□□ -0.8
MSF1YPR047W YJL049WP47048 450 aa10.03□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms