RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C AMD1P15274 810 aaKnown RBP8.39□□□□□ -1.07
PUP1YOR157C TYR1P20049 452 aa8.39□□□□□ -1.07
PUP1YOR157C PRO1P32264 428 aa8.39□□□□□ -1.07
PUP1YOR157C ATP11P32453 318 aa8.39□□□□□ -1.07
PUP1YOR157C YRO2P38079 344 aa8.39□□□□□ -1.07
PUP1YOR157C DHH1P39517 506 aaKnown RBP8.39□□□□□ -1.07
PUP1YOR157C RVS167P39743 482 aaKnown RBP8.39□□□□□ -1.07
PUP1YOR157C PFA3P42836 336 aa8.39□□□□□ -1.07
PUP1YOR157C IBA57P47158 497 aa8.39□□□□□ -1.07
PUP1YOR157C BRO1P48582 844 aa8.39□□□□□ -1.07
PUP1YOR157C ERG26P53199 349 aaKnown RBP8.39□□□□□ -1.07
PUP1YOR157C YGR021WP53212 290 aa8.39□□□□□ -1.07
PUP1YOR157C JJJ1P53863 590 aa8.39□□□□□ -1.07
PUP1YOR157C MRS2Q01926 470 aa8.39□□□□□ -1.07
PUP1YOR157C SLU7Q02775 382 aaKnown RBP8.39□□□□□ -1.07
PUP1YOR157C MTQ2Q03920 221 aaPredicted RBP8.39□□□□□ -1.07
PUP1YOR157C BDS1Q08347 646 aa8.39□□□□□ -1.07
PUP1YOR157C PUS7Q08647 676 aaKnown RBP8.39□□□□□ -1.07
PUP1YOR157C ATG9Q12142 997 aa8.39□□□□□ -1.07
PUP1YOR157C GTT2Q12390 233 aa8.39□□□□□ -1.07
PUP1YOR157C COX1P00401 534 aa8.38□□□□□ -1.07
PUP1YOR157C ATG15P25641 520 aa8.38□□□□□ -1.07
PUP1YOR157C BUB3P26449 341 aa8.38□□□□□ -1.07
PUP1YOR157C YBL055CP34220 418 aaPredicted RBP8.38□□□□□ -1.07
PUP1YOR157C STB6P36085 766 aa8.38□□□□□ -1.07
PUP1YOR157C EHT1P38295 451 aa8.38□□□□□ -1.07
PUP1YOR157C RIM11P38615 370 aa8.38□□□□□ -1.07
PUP1YOR157C SSN3P39073 555 aa8.38□□□□□ -1.07
PUP1YOR157C MBP1P39678 833 aa8.38□□□□□ -1.07
PUP1YOR157C TAH11P47112 604 aa8.38□□□□□ -1.07
PUP1YOR157C NNF1P47149 201 aa8.38□□□□□ -1.07
PUP1YOR157C SSL2Q00578 843 aa8.38□□□□□ -1.07
PUP1YOR157C SED5Q01590 340 aa8.38□□□□□ -1.07
PUP1YOR157C AAT1Q01802 451 aa8.38□□□□□ -1.07
PUP1YOR157C TRS31Q03337 283 aa8.38□□□□□ -1.07
PUP1YOR157C BLS1Q06071 122 aa8.38□□□□□ -1.07
PUP1YOR157C RSC3Q06639 885 aa8.38□□□□□ -1.07
PUP1YOR157C OMS1Q06668 471 aa8.38□□□□□ -1.07
PUP1YOR157C GRS2Q06817 618 aa8.38□□□□□ -1.07
PUP1YOR157C PUF3Q07807 879 aaKnown RBP RIP-Chip data8.38□□□□□ -1.07not detected
PUP1YOR157C HAL9Q12180 1030 aa8.38□□□□□ -1.07
PUP1YOR157C YDL177CQ12257 170 aa8.38□□□□□ -1.07
PUP1YOR157C AIM44Q99299 758 aa8.38□□□□□ -1.07
PUP1YOR157C ATE1P16639 503 aa8.37□□□□□ -1.07
PUP1YOR157C NDI1P32340 513 aa8.37□□□□□ -1.07
PUP1YOR157C SFA1P32771 386 aa8.37□□□□□ -1.07
PUP1YOR157C MGM101P32787 269 aaKnown RBP8.37□□□□□ -1.07
PUP1YOR157C ACO2P39533 789 aa8.37□□□□□ -1.07
PUP1YOR157C MAD1P40957 749 aa8.37□□□□□ -1.07
PUP1YOR157C PRO2P54885 456 aaKnown RBP8.37□□□□□ -1.07
PUP1YOR157C TPP1Q03796 238 aa8.37□□□□□ -1.07
PUP1YOR157C RPN9Q04062 393 aaKnown RBP8.37□□□□□ -1.07
PUP1YOR157C GIC2Q06648 383 aa8.37□□□□□ -1.07
PUP1YOR157C IRC13Q08630 104 aa8.37□□□□□ -1.07
PUP1YOR157C YRA1Q12159 226 aaKnown RBP8.37□□□□□ -1.07
PUP1YOR157C YDR018CQ12185 396 aa8.37□□□□□ -1.07
PUP1YOR157C AI3P03877 415 aa8.36□□□□□ -1.07
PUP1YOR157C SWI5P08153 709 aa8.36□□□□□ -1.07
PUP1YOR157C CDC26P14724 124 aa8.36□□□□□ -1.07
PUP1YOR157C BLI1P35727 113 aa8.36□□□□□ -1.07
PUP1YOR157C SET5P38890 526 aaKnown RBP8.36□□□□□ -1.07
PUP1YOR157C TIF11P38912 153 aaKnown RBP8.36□□□□□ -1.07
PUP1YOR157C YML6P51998 286 aa8.36□□□□□ -1.07
PUP1YOR157C NUP53Q03790 475 aa8.36□□□□□ -1.07
PUP1YOR157C AKR2Q12013 749 aa8.36□□□□□ -1.07
PUP1YOR157C SSA3P09435 649 aaKnown RBP8.35□□□□□ -1.07
PUP1YOR157C RPS4AP0CX35 261 aaKnown RBP8.35□□□□□ -1.07
PUP1YOR157C RPS4BP0CX36 261 aaKnown RBP8.35□□□□□ -1.07
PUP1YOR157C YCR102CP25608 368 aa8.35□□□□□ -1.07
PUP1YOR157C EAP1P36041 632 aaKnown RBP8.35□□□□□ -1.07
PUP1YOR157C YHR045WP38775 560 aa8.35□□□□□ -1.07
PUP1YOR157C SPC72P39723 622 aa8.35□□□□□ -1.07
PUP1YOR157C UTP18P40362 594 aaPredicted RBP8.35□□□□□ -1.07
PUP1YOR157C COS12P53053 380 aa8.35□□□□□ -1.07
PUP1YOR157C NUT2Q06213 157 aa8.35□□□□□ -1.07
PUP1YOR157C YOR342CQ12182 319 aa8.35□□□□□ -1.07
PUP1YOR157C PHO5P00635 467 aa8.34□□□□□ -1.07
PUP1YOR157C ERG11P10614 530 aa8.34□□□□□ -1.07
PUP1YOR157C PMS1P14242 873 aa8.34□□□□□ -1.07
PUP1YOR157C GRR1P24814 1151 aa8.34□□□□□ -1.07
PUP1YOR157C ORC2P32833 620 aa8.34□□□□□ -1.07
PUP1YOR157C SRP101P32916 621 aa8.34□□□□□ -1.07
PUP1YOR157C CKB2P38930 258 aa8.34□□□□□ -1.07
PUP1YOR157C MPT5P39016 859 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
PUP1YOR157C RGA1P39083 1007 aa8.34□□□□□ -1.07
PUP1YOR157C HDA3Q06623 655 aa8.34□□□□□ -1.07
PUP1YOR157C ADY3Q07732 790 aa8.34□□□□□ -1.07
PUP1YOR157C YOR114WQ12219 294 aa8.34□□□□□ -1.07
PUP1YOR157C TPO4Q12256 659 aa8.34□□□□□ -1.07
PUP1YOR157C YOR097CQ12274 175 aaPredicted RBP8.34□□□□□ -1.07
PUP1YOR157C YOR012WQ12351 137 aa8.34□□□□□ -1.07
PUP1YOR157C AGP1P25376 633 aa8.33□□□□□ -1.08
PUP1YOR157C SBA1P28707 216 aaKnown RBP8.33□□□□□ -1.08
PUP1YOR157C MAK5P38112 773 aaPredicted RBP8.33□□□□□ -1.08
PUP1YOR157C SEA4P38164 1038 aa8.33□□□□□ -1.08
PUP1YOR157C MNL1P38888 796 aa8.33□□□□□ -1.08
PUP1YOR157C SEO1P39709 593 aa8.33□□□□□ -1.08
PUP1YOR157C NOP15P53927 220 aaPredicted RBP8.33□□□□□ -1.08
PUP1YOR157C YPR109WQ06104 294 aa8.33□□□□□ -1.08
PUP1YOR157C OPY2Q06810 360 aa8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms