RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C PTM1P32857 523 aa8.56□□□□□ -1.04
RPD3YNL330C RPT5P33297 434 aaKnown RBP8.56□□□□□ -1.04
RPD3YNL330C SKT5P34226 696 aa8.56□□□□□ -1.04
RPD3YNL330C MOT2P34909 587 aaKnown RBP8.56□□□□□ -1.04
RPD3YNL330C SKG1P36169 355 aa8.56□□□□□ -1.04
RPD3YNL330C YBR138CP38277 524 aa8.56□□□□□ -1.04
RPD3YNL330C YBR285WP38354 144 aa8.56□□□□□ -1.04
RPD3YNL330C MSC7P38694 644 aa8.56□□□□□ -1.04
RPD3YNL330C IST3P40565 148 aaPredicted RBP8.56□□□□□ -1.04
RPD3YNL330C YJR154WP47181 346 aa8.56□□□□□ -1.04
RPD3YNL330C YGR054WP53235 642 aaKnown RBP8.56□□□□□ -1.04
RPD3YNL330C TIM13P53299 105 aa8.56□□□□□ -1.04
RPD3YNL330C IBD2P53892 351 aa8.56□□□□□ -1.04
RPD3YNL330C NUP100Q02629 959 aa8.56□□□□□ -1.04
RPD3YNL330C YML131WQ03102 365 aa8.56□□□□□ -1.04
RPD3YNL330C TFB3Q03290 321 aa8.56□□□□□ -1.04
RPD3YNL330C SMP3Q04174 516 aa8.56□□□□□ -1.04
RPD3YNL330C SPO20Q04359 397 aa8.56□□□□□ -1.04
RPD3YNL330C NDL1Q06568 189 aa8.56□□□□□ -1.04
RPD3YNL330C LOT6Q07923 191 aa8.56□□□□□ -1.04
RPD3YNL330C PKH2Q12236 1081 aaKnown RBP8.56□□□□□ -1.04
RPD3YNL330C THP2O13539 261 aaKnown RBP8.55□□□□□ -1.04
RPD3YNL330C PRT1P06103 763 aaKnown RBP8.55□□□□□ -1.04
RPD3YNL330C TOP3P13099 656 aa8.55□□□□□ -1.04
RPD3YNL330C KGD2P19262 463 aaPredicted RBP8.55□□□□□ -1.04
RPD3YNL330C CLN1P20437 546 aa8.55□□□□□ -1.04
RPD3YNL330C POL4P25615 582 aa8.55□□□□□ -1.04
RPD3YNL330C PTP2P29461 750 aa8.55□□□□□ -1.04
RPD3YNL330C TFB1P32776 642 aa8.55□□□□□ -1.04
RPD3YNL330C TYE7P33122 291 aaPredicted RBP8.55□□□□□ -1.04
RPD3YNL330C SRL3P36167 246 aa8.55□□□□□ -1.04
RPD3YNL330C FTH1P38310 465 aa8.55□□□□□ -1.04
RPD3YNL330C URA8P38627 578 aaPredicted RBP8.55□□□□□ -1.04
RPD3YNL330C GOS1P38736 223 aa8.55□□□□□ -1.04
RPD3YNL330C VAC8P39968 578 aa8.55□□□□□ -1.04
RPD3YNL330C THO1P40040 218 aaKnown RBP8.55□□□□□ -1.04
RPD3YNL330C SLX8P40072 274 aa8.55□□□□□ -1.04
RPD3YNL330C RIC1P40395 1056 aa8.55□□□□□ -1.04
RPD3YNL330C MET18P40469 1032 aa8.55□□□□□ -1.04
RPD3YNL330C STR3P53101 465 aaKnown RBP8.55□□□□□ -1.04
RPD3YNL330C BRE5P53741 515 aaKnown RBP8.55□□□□□ -1.04
RPD3YNL330C SFB2P53953 876 aa8.55□□□□□ -1.04
RPD3YNL330C CEG1Q01159 459 aaPredicted RBP8.55□□□□□ -1.04
RPD3YNL330C YKR005CQ02203 525 aa8.55□□□□□ -1.04
RPD3YNL330C SSQ1Q05931 657 aaPredicted RBP8.55□□□□□ -1.04
RPD3YNL330C RRP15Q06511 250 aaPredicted RBP8.55□□□□□ -1.04
RPD3YNL330C TRE2Q08693 809 aa8.55□□□□□ -1.04
RPD3YNL330C RMD5Q12508 421 aa8.55□□□□□ -1.04
RPD3YNL330C HSF1P10961 833 aa8.54□□□□□ -1.04
RPD3YNL330C URE2P23202 354 aaKnown RBP8.54□□□□□ -1.04
RPD3YNL330C DMC1P25453 334 aa8.54□□□□□ -1.04
RPD3YNL330C COX13P32799 129 aa8.54□□□□□ -1.04
RPD3YNL330C ADD66P36040 267 aa8.54□□□□□ -1.04
RPD3YNL330C ROT2P38138 954 aa8.54□□□□□ -1.04
RPD3YNL330C STB5P38699 743 aa8.54□□□□□ -1.04
RPD3YNL330C RGI2P40188 164 aa8.54□□□□□ -1.04
RPD3YNL330C MSS2P40990 351 aa8.54□□□□□ -1.04
RPD3YNL330C ELP2P42935 788 aa8.54□□□□□ -1.04
RPD3YNL330C RBL2P48606 106 aaKnown RBP8.54□□□□□ -1.04
RPD3YNL330C TAF12Q03761 539 aa8.54□□□□□ -1.04
RPD3YNL330C FMP42Q04991 504 aa8.54□□□□□ -1.04
RPD3YNL330C ORM2Q06144 216 aa8.54□□□□□ -1.04
RPD3YNL330C GYP1Q08484 637 aa8.54□□□□□ -1.04
RPD3YNL330C YLR049CQ12110 428 aa8.54□□□□□ -1.04
RPD3YNL330C VCX1Q99385 411 aa8.54□□□□□ -1.04
RPD3YNL330C SEC53P07283 254 aaKnown RBP8.54□□□□□ -1.04
RPD3YNL330C COS2P0CX12 379 aa8.54□□□□□ -1.04
RPD3YNL330C COS3P0CX13 379 aa8.54□□□□□ -1.04
RPD3YNL330C MSS116P15424 664 aaKnown RBP8.54□□□□□ -1.04
RPD3YNL330C SIS1P25294 352 aaKnown RBP8.54□□□□□ -1.04
RPD3YNL330C SGF29P25554 259 aa8.54□□□□□ -1.04
RPD3YNL330C YCR099CP25657 155 aa8.54□□□□□ -1.04
RPD3YNL330C MF(ALPHA)2P32435 120 aa8.54□□□□□ -1.04
RPD3YNL330C CYS4P32582 507 aaKnown RBP8.54□□□□□ -1.04
RPD3YNL330C RIB7P33312 244 aa8.54□□□□□ -1.04
RPD3YNL330C RFS1P38234 210 aaKnown RBP8.54□□□□□ -1.04
RPD3YNL330C SRP72P38688 640 aaKnown RBP8.54□□□□□ -1.04
RPD3YNL330C APE4P38821 490 aa8.54□□□□□ -1.04
RPD3YNL330C TIF11P38912 153 aaKnown RBP8.54□□□□□ -1.04
RPD3YNL330C FAD1P38913 306 aa8.54□□□□□ -1.04
RPD3YNL330C TVP23P38962 199 aa8.54□□□□□ -1.04
RPD3YNL330C GIP4P39732 760 aa8.54□□□□□ -1.04
RPD3YNL330C COS4P43542 379 aa8.54□□□□□ -1.04
RPD3YNL330C IRC5P43610 853 aa8.54□□□□□ -1.04
RPD3YNL330C PET130P47065 347 aa8.54□□□□□ -1.04
RPD3YNL330C NAS6P50086 228 aa8.54□□□□□ -1.04
RPD3YNL330C UGO1Q03327 502 aa8.54□□□□□ -1.04
RPD3YNL330C PEX12Q04370 399 aa8.54□□□□□ -1.04
RPD3YNL330C ENT2Q05785 613 aa8.54□□□□□ -1.04
RPD3YNL330C ECM22Q05958 814 aaPredicted RBP8.54□□□□□ -1.04
RPD3YNL330C RSB1Q08417 382 aa8.54□□□□□ -1.04
RPD3YNL330C HUA2Q12134 243 aa8.54□□□□□ -1.04
RPD3YNL330C SUC2P00724 532 aa8.53□□□□□ -1.04
RPD3YNL330C RHO1P06780 209 aaKnown RBP8.53□□□□□ -1.04
RPD3YNL330C RAP1P11938 827 aa8.53□□□□□ -1.04
RPD3YNL330C PUP3P25451 205 aaKnown RBP8.53□□□□□ -1.04
RPD3YNL330C CIN8P27895 1000 aa8.53□□□□□ -1.04
RPD3YNL330C FUN30P31380 1131 aa8.53□□□□□ -1.04
RPD3YNL330C GUT2P32191 649 aa8.53□□□□□ -1.04
RPD3YNL330C APE2P32454 952 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms