RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	KCS1	Q12494	1050 aa		5.84	□□□□□ -1.47
CSL4	YNL232W	VPS5	Q92331	675 aa		5.84	□□□□□ -1.47
CSL4	YNL232W	PMA2	P19657	947 aa		5.83	□□□□□ -1.48
CSL4	YNL232W	YAL037W	P39728	267 aa		5.83	□□□□□ -1.48
CSL4	YNL232W	SNZ3	P43545	298 aa		5.83	□□□□□ -1.48
CSL4	YNL232W	YGL176C	P46945	554 aa		5.83	□□□□□ -1.48
CSL4	YNL232W	BIR1	P47134	954 aa		5.83	□□□□□ -1.48
CSL4	YNL232W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.83	□□□□□ -1.48	not detected
CSL4	YNL232W	SNZ2	P53824	298 aa		5.83	□□□□□ -1.48
CSL4	YNL232W	TEP1	P53916	434 aa		5.83	□□□□□ -1.48
CSL4	YNL232W	SND1	Q04007	877 aa		5.83	□□□□□ -1.48
CSL4	YNL232W	HRQ1	Q05549	1077 aa		5.83	□□□□□ -1.48
CSL4	YNL232W	KAP95	Q06142	861 aa	Known RBP	5.83	□□□□□ -1.48
CSL4	YNL232W	CDA1	Q06702	301 aa		5.83	□□□□□ -1.48
CSL4	YNL232W	TRE2	Q08693	809 aa		5.83	□□□□□ -1.48
CSL4	YNL232W	AFT2	Q08957	416 aa		5.83	□□□□□ -1.48
CSL4	YNL232W	SEC16	P48415	2195 aa	Known RBP	5.82	□□□□□ -1.48
CSL4	YNL232W	BI2	P03873	423 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	CDC34	P14682	295 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	KAR3	P17119	729 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	EST1	P17214	699 aa	Predicted RBP	5.82	□□□□□ -1.48
CSL4	YNL232W	HRR25	P29295	494 aa	Known RBP	5.82	□□□□□ -1.48
CSL4	YNL232W	SPR1	P32603	445 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	SRP101	P32916	621 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	SEF1	P34228	1148 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	TRZ1	P36159	838 aa	Predicted RBP	5.82	□□□□□ -1.48
CSL4	YNL232W	FUI1	P38196	639 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	EFM2	P38347	419 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	LRP1	P38801	184 aa	Known RBP	5.82	□□□□□ -1.48
CSL4	YNL232W	SMF1	P38925	575 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	DLD2	P46681	530 aa	Known RBP	5.82	□□□□□ -1.48
CSL4	YNL232W	SPC105	P53148	917 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	YGR012W	P53206	393 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	ESBP6	P53918	673 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	ARG7	Q04728	441 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	GRX8	Q05926	109 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	DIC1	Q06143	298 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	SPO75	Q07798	868 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	VPS68	Q12016	184 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	TMS1	Q12116	473 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	AFI1	Q99222	893 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	BI3	Q9ZZW7	517 aa		5.82	□□□□□ -1.48
CSL4	YNL232W	CYR1	P08678	2026 aa	Known RBP	5.82	□□□□□ -1.48
CSL4	YNL232W	YPR089W	O13585	888 aa		5.81	□□□□□ -1.48
CSL4	YNL232W	BIK1	P11709	440 aa		5.81	□□□□□ -1.48
CSL4	YNL232W	SCL1	P21243	252 aa	Known RBP	5.81	□□□□□ -1.48
CSL4	YNL232W	SEC1	P30619	724 aa	Known RBP	5.81	□□□□□ -1.48
CSL4	YNL232W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.81	□□□□□ -1.48	not detected
CSL4	YNL232W	RPS0A	P32905	252 aa	Known RBP	5.81	□□□□□ -1.48
CSL4	YNL232W	RPC25	P35718	212 aa		5.81	□□□□□ -1.48
CSL4	YNL232W	SRP72	P38688	640 aa	Known RBP	5.81	□□□□□ -1.48
CSL4	YNL232W	CCT6	P39079	546 aa		5.81	□□□□□ -1.48
CSL4	YNL232W	TIM17	P39515	158 aa		5.81	□□□□□ -1.48
CSL4	YNL232W	CIR1	P42940	261 aa		5.81	□□□□□ -1.48
CSL4	YNL232W	IKS1	P47042	667 aa		5.81	□□□□□ -1.48
CSL4	YNL232W	TRF5	P48561	642 aa	Known RBP	5.81	□□□□□ -1.48
CSL4	YNL232W	BET4	Q00618	327 aa		5.81	□□□□□ -1.48
CSL4	YNL232W	YOR338W	Q99326	363 aa		5.81	□□□□□ -1.48
CSL4	YNL232W	SCH9	P11792	824 aa	Known RBP	5.8	□□□□□ -1.48
CSL4	YNL232W	GAL11	P19659	1081 aa		5.8	□□□□□ -1.48
CSL4	YNL232W	AAT2	P23542	418 aa	Known RBP	5.8	□□□□□ -1.48
CSL4	YNL232W	YCR006C	P25350	157 aa		5.8	□□□□□ -1.48
CSL4	YNL232W	MVD1	P32377	396 aa	Known RBP	5.8	□□□□□ -1.48
CSL4	YNL232W	YKL107W	P34251	309 aa		5.8	□□□□□ -1.48
CSL4	YNL232W	TAF14	P35189	244 aa		5.8	□□□□□ -1.48
CSL4	YNL232W	YKT6	P36015	200 aa	Known RBP	5.8	□□□□□ -1.48
CSL4	YNL232W	YEL028W	P39989	153 aa		5.8	□□□□□ -1.48
CSL4	YNL232W	MGS1	P40151	587 aa		5.8	□□□□□ -1.48
CSL4	YNL232W	PCL10	P53124	433 aa		5.8	□□□□□ -1.48
CSL4	YNL232W	SWC4	P53201	476 aa		5.8	□□□□□ -1.48
CSL4	YNL232W	EBS1	Q03466	884 aa	Known RBP	5.8	□□□□□ -1.48
CSL4	YNL232W	VID22	Q05934	901 aa		5.8	□□□□□ -1.48
CSL4	YNL232W	YDL073W	Q07454	984 aa		5.8	□□□□□ -1.48
CSL4	YNL232W	TRM8	Q12009	286 aa		5.8	□□□□□ -1.48
CSL4	YNL232W	YDR262W	Q12331	272 aa		5.8	□□□□□ -1.48
CSL4	YNL232W	ARA1	P38115	344 aa		5.79	□□□□□ -1.48
CSL4	YNL232W	MSR1	P38714	643 aa		5.79	□□□□□ -1.48
CSL4	YNL232W	YIL054W	P40524	105 aa		5.79	□□□□□ -1.48
CSL4	YNL232W	TY4A-J	P47023	414 aa		5.79	□□□□□ -1.48
CSL4	YNL232W	YNL143C	P53908	130 aa		5.79	□□□□□ -1.48
CSL4	YNL232W	VMS1	Q04311	632 aa	Known RBP	5.79	□□□□□ -1.48
CSL4	YNL232W	SWC7	Q06707	132 aa		5.79	□□□□□ -1.48
CSL4	YNL232W	CMS1	Q07897	291 aa	Known RBP	5.79	□□□□□ -1.48
CSL4	YNL232W	PLB3	Q08108	686 aa		5.79	□□□□□ -1.48
CSL4	YNL232W	CIR2	Q08822	631 aa		5.79	□□□□□ -1.48
CSL4	YNL232W	THI21	Q08975	551 aa		5.79	□□□□□ -1.48
CSL4	YNL232W	RRP6	Q12149	733 aa	Known RBP	5.79	□□□□□ -1.48
CSL4	YNL232W	LAS17	Q12446	633 aa		5.79	□□□□□ -1.48
CSL4	YNL232W	TUB3	P09734	445 aa	Known RBP	5.78	□□□□□ -1.48
CSL4	YNL232W	YPK1	P12688	680 aa	Known RBP	5.78	□□□□□ -1.48
CSL4	YNL232W	MRC1	P25588	1096 aa		5.78	□□□□□ -1.48
CSL4	YNL232W	PET112	P33893	541 aa		5.78	□□□□□ -1.48
CSL4	YNL232W	TOM20	P35180	183 aa		5.78	□□□□□ -1.48
CSL4	YNL232W	GIC1	P38785	314 aa		5.78	□□□□□ -1.48
CSL4	YNL232W	SIP4	P46954	829 aa		5.78	□□□□□ -1.48
CSL4	YNL232W	NNF1	P47149	201 aa		5.78	□□□□□ -1.48
CSL4	YNL232W	YPT11	P48559	417 aa		5.78	□□□□□ -1.48
CSL4	YNL232W	YNL092W	P53934	400 aa		5.78	□□□□□ -1.48
CSL4	YNL232W	TGL2	P54857	326 aa		5.78	□□□□□ -1.48
CSL4	YNL232W	REG1	Q00816	1014 aa		5.78	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms