RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	UME6	P39001	836 aa		3.83	□□□□□ -1.8
TPM1	YNL079C	YIL161W	P40449	235 aa	Known RBP	3.83	□□□□□ -1.8
TPM1	YNL079C	UBP7	P40453	1071 aa		3.83	□□□□□ -1.8
TPM1	YNL079C	CIN1	P40987	1014 aa		3.83	□□□□□ -1.8
TPM1	YNL079C	YFH7	P43591	353 aa		3.83	□□□□□ -1.8
TPM1	YNL079C	NMD5	P46970	1048 aa		3.83	□□□□□ -1.8
TPM1	YNL079C	YPL071C	Q02864	156 aa		3.83	□□□□□ -1.8
TPM1	YNL079C	ERO1	Q03103	563 aa		3.83	□□□□□ -1.8
TPM1	YNL079C	RIM13	Q03792	727 aa		3.83	□□□□□ -1.8
TPM1	YNL079C	UBX2	Q04228	584 aa		3.83	□□□□□ -1.8
TPM1	YNL079C	TPO3	Q06451	622 aa		3.83	□□□□□ -1.8
TPM1	YNL079C	YOR389W	Q08912	624 aa		3.83	□□□□□ -1.8
TPM1	YNL079C	LEA1	Q08963	238 aa	Predicted RBP	3.83	□□□□□ -1.8
TPM1	YNL079C	FRS2	P15625	503 aa	Known RBP	3.82	□□□□□ -1.8
TPM1	YNL079C	YSP3	P25036	478 aa		3.82	□□□□□ -1.8
TPM1	YNL079C	SMY1	P32364	656 aa	Known RBP	3.82	□□□□□ -1.8
TPM1	YNL079C	SLC1	P33333	303 aa		3.82	□□□□□ -1.8
TPM1	YNL079C	PTK1	P36002	662 aa	Predicted RBP	3.82	□□□□□ -1.8
TPM1	YNL079C	TEF4	P36008	412 aa	Known RBP	3.82	□□□□□ -1.8
TPM1	YNL079C	YPT53	P36019	220 aa		3.82	□□□□□ -1.8
TPM1	YNL079C	RRN3	P36070	627 aa		3.82	□□□□□ -1.8
TPM1	YNL079C	ERV46	P39727	415 aa		3.82	□□□□□ -1.8
TPM1	YNL079C	IST3	P40565	148 aa	Predicted RBP	3.82	□□□□□ -1.8
TPM1	YNL079C	EPL1	P43572	832 aa		3.82	□□□□□ -1.8
TPM1	YNL079C	ASE1	P50275	885 aa		3.82	□□□□□ -1.8
TPM1	YNL079C	TMA16	Q08687	178 aa		3.82	□□□□□ -1.8
TPM1	YNL079C	DDP1	Q99321	188 aa	Known RBP	3.82	□□□□□ -1.8
TPM1	YNL079C	PMD1	P32634	1753 aa		3.81	□□□□□ -1.8
TPM1	YNL079C	HSP82	P02829	709 aa	Known RBP	3.81	□□□□□ -1.8
TPM1	YNL079C	URE2	P23202	354 aa	Known RBP	3.81	□□□□□ -1.8
TPM1	YNL079C	RTS1	P38903	757 aa		3.81	□□□□□ -1.8
TPM1	YNL079C	PHM8	P40025	321 aa		3.81	□□□□□ -1.8
TPM1	YNL079C	KAP123	P40069	1113 aa	Known RBP	3.81	□□□□□ -1.8
TPM1	YNL079C	IRC7	P43623	340 aa		3.81	□□□□□ -1.8
TPM1	YNL079C	YPR003C	P53394	754 aa		3.81	□□□□□ -1.8
TPM1	YNL079C	YML122C	Q03207	126 aa		3.81	□□□□□ -1.8
TPM1	YNL079C	SNU56	Q03782	492 aa	Known RBP	3.81	□□□□□ -1.8
TPM1	YNL079C	SNF3	P10870	884 aa		3.8	□□□□□ -1.8
TPM1	YNL079C	GUK1	P15454	187 aa	Known RBP	3.8	□□□□□ -1.8
TPM1	YNL079C	ANP1	P32629	500 aa		3.8	□□□□□ -1.8
TPM1	YNL079C	CNS1	P33313	385 aa		3.8	□□□□□ -1.8
TPM1	YNL079C	BMH2	P34730	273 aa	Known RBP	3.8	□□□□□ -1.8
TPM1	YNL079C	MYO3	P36006	1272 aa		3.8	□□□□□ -1.8
TPM1	YNL079C	MIC60	P36112	540 aa		3.8	□□□□□ -1.8
TPM1	YNL079C	RFT1	P38206	574 aa	Predicted RBP	3.8	□□□□□ -1.8
TPM1	YNL079C	AXL2	P38928	823 aa		3.8	□□□□□ -1.8
TPM1	YNL079C	YER010C	P40011	234 aa		3.8	□□□□□ -1.8
TPM1	YNL079C	RIC1	P40395	1056 aa		3.8	□□□□□ -1.8
TPM1	YNL079C	YPT11	P48559	417 aa		3.8	□□□□□ -1.8
TPM1	YNL079C	DCP2	P53550	970 aa	Known RBP	3.8	□□□□□ -1.8
TPM1	YNL079C	IDP3	P53982	420 aa	Known RBP	3.8	□□□□□ -1.8
TPM1	YNL079C	RSC9	Q03124	581 aa		3.8	□□□□□ -1.8
TPM1	YNL079C	MRD1	Q06106	887 aa	Known RBP	3.8	□□□□□ -1.8
TPM1	YNL079C	NEW1	Q08972	1196 aa	Known RBP	3.8	□□□□□ -1.8
TPM1	YNL079C	GRX6	Q12438	231 aa		3.8	□□□□□ -1.8
TPM1	YNL079C	FLO1	P32768	1537 aa		3.8	□□□□□ -1.8
TPM1	YNL079C	FAS2	P19097	1887 aa	Known RBP	3.79	□□□□□ -1.8
TPM1	YNL079C	TOP1	P04786	769 aa		3.79	□□□□□ -1.8
TPM1	YNL079C	GPA1	P08539	472 aa		3.79	□□□□□ -1.8
TPM1	YNL079C	MDM10	P18409	493 aa		3.79	□□□□□ -1.8
TPM1	YNL079C	SRP54	P20424	541 aa	Known RBP	3.79	□□□□□ -1.8
TPM1	YNL079C	SSH4	P32343	579 aa		3.79	□□□□□ -1.8
TPM1	YNL079C	MPE1	P35728	441 aa	Known RBP	3.79	□□□□□ -1.8
TPM1	YNL079C	YKT6	P36015	200 aa	Known RBP	3.79	□□□□□ -1.8
TPM1	YNL079C	MRPL10	P36520	322 aa		3.79	□□□□□ -1.8
TPM1	YNL079C	PSD1	P39006	500 aa		3.79	□□□□□ -1.8
TPM1	YNL079C	YER130C	P39959	443 aa		3.79	□□□□□ -1.8
TPM1	YNL079C	XBP1	P40489	647 aa		3.79	□□□□□ -1.8
TPM1	YNL079C	CDC1	P40986	491 aa		3.79	□□□□□ -1.8
TPM1	YNL079C	SNO3	P43544	222 aa		3.79	□□□□□ -1.8
TPM1	YNL079C	BNA3	P47039	444 aa	Known RBP	3.79	□□□□□ -1.8
TPM1	YNL079C	REG1	Q00816	1014 aa		3.79	□□□□□ -1.8
TPM1	YNL079C	PRP42	Q03776	544 aa	Known RBP	3.79	□□□□□ -1.8
TPM1	YNL079C	SWA2	Q06677	668 aa		3.79	□□□□□ -1.8
TPM1	YNL079C	ERG27	Q12452	347 aa	Known RBP	3.79	□□□□□ -1.8
TPM1	YNL079C	RAD61	Q99359	647 aa		3.79	□□□□□ -1.8
TPM1	YNL079C	YLR302C	O13544	120 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	ILS1	P09436	1072 aa	Known RBP	3.78	□□□□□ -1.8
TPM1	YNL079C	VPS1	P21576	704 aa	Known RBP	3.78	□□□□□ -1.8
TPM1	YNL079C	MAK31	P23059	88 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	ERG8	P24521	451 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	RER1	P25560	188 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	CBF2	P32504	956 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	SRB5	P32585	307 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	RXT2	P38255	430 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	VID27	P40157	782 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	LTP1	P40347	161 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	CSM2	P40465	213 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	ASG1	P40467	964 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	ULP2	P40537	1034 aa	Predicted RBP	3.78	□□□□□ -1.8
TPM1	YNL079C	EAF6	P47128	113 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	ORC5	P50874	479 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	VPS4	P52917	437 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	MYO5	Q04439	1219 aa	Known RBP	3.78	□□□□□ -1.8
TPM1	YNL079C	SNO4	Q04902	237 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	CRN1	Q06440	651 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	HSP33	Q08914	237 aa	Known RBP	3.78	□□□□□ -1.8
TPM1	YNL079C	HSP32	Q08992	237 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	GET3	Q12154	354 aa	Known RBP	3.78	□□□□□ -1.8
TPM1	YNL079C	YOR111W	Q99210	232 aa		3.78	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms