RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W AVT5P38176 459 aa3.56□□□□□ -1.84
UBP8YMR223W RFC1P38630 861 aaKnown RBP3.56□□□□□ -1.84
UBP8YMR223W MDM31P38880 579 aa3.56□□□□□ -1.84
UBP8YMR223W RTS1P38903 757 aa3.56□□□□□ -1.84
UBP8YMR223W YIL161WP40449 235 aaKnown RBP3.56□□□□□ -1.84
UBP8YMR223W MKT1P40850 830 aaKnown RBP3.56□□□□□ -1.84
UBP8YMR223W ZAP1P47043 880 aa3.56□□□□□ -1.84
UBP8YMR223W PRP3Q03338 469 aaPredicted RBP3.56□□□□□ -1.84
UBP8YMR223W HEL2Q05580 639 aaKnown RBP3.56□□□□□ -1.84
UBP8YMR223W TSR2Q06672 205 aaKnown RBP3.56□□□□□ -1.84
UBP8YMR223W TPM1P17536 199 aaKnown RBP3.55□□□□□ -1.84
UBP8YMR223W GAC1P28006 793 aa3.55□□□□□ -1.84
UBP8YMR223W VPH1P32563 840 aaKnown RBP3.55□□□□□ -1.84
UBP8YMR223W VMA8P32610 256 aaKnown RBP3.55□□□□□ -1.84
UBP8YMR223W NUP120P35729 1037 aa3.55□□□□□ -1.84
UBP8YMR223W YKL133CP36066 463 aa3.55□□□□□ -1.84
UBP8YMR223W STV1P37296 890 aa3.55□□□□□ -1.84
UBP8YMR223W YHL041WP38730 149 aa3.55□□□□□ -1.84
UBP8YMR223W CAJ1P39101 391 aa3.55□□□□□ -1.84
UBP8YMR223W AZF1P41696 914 aa3.55□□□□□ -1.84
UBP8YMR223W PAP2P53632 584 aaKnown RBP3.55□□□□□ -1.84
UBP8YMR223W ERO1Q03103 563 aa3.55□□□□□ -1.84
UBP8YMR223W YDR286CQ05530 114 aa3.55□□□□□ -1.84
UBP8YMR223W MLC2Q06580 163 aa3.55□□□□□ -1.84
UBP8YMR223W VAM6Q07468 1049 aa3.55□□□□□ -1.84
UBP8YMR223W RRP6Q12149 733 aaKnown RBP3.55□□□□□ -1.84
UBP8YMR223W SAS3P34218 831 aa3.54□□□□□ -1.84
UBP8YMR223W PTH2P34222 208 aa3.54□□□□□ -1.84
UBP8YMR223W PHO90P39535 881 aa3.54□□□□□ -1.84
UBP8YMR223W YJL068CP40363 299 aa3.54□□□□□ -1.84
UBP8YMR223W TAN1P53072 289 aaPredicted RBP3.54□□□□□ -1.84
UBP8YMR223W BOR1P53838 576 aa3.54□□□□□ -1.84
UBP8YMR223W RRP9Q06506 573 aaKnown RBP3.54□□□□□ -1.84
UBP8YMR223W QCR6P00127 147 aa3.53□□□□□ -1.84
UBP8YMR223W SAN1P22470 610 aa3.53□□□□□ -1.84
UBP8YMR223W KRR1P25586 316 aaPredicted RBP3.53□□□□□ -1.84
UBP8YMR223W CHS3P29465 1165 aa3.53□□□□□ -1.84
UBP8YMR223W NTR2P36118 322 aaPredicted RBP3.53□□□□□ -1.84
UBP8YMR223W ERG7P38604 731 aa3.53□□□□□ -1.84
UBP8YMR223W ERR3P42222 437 aa3.53□□□□□ -1.84
UBP8YMR223W GUF1P46943 645 aa3.53□□□□□ -1.84
UBP8YMR223W BTN2P53286 410 aa3.53□□□□□ -1.84
UBP8YMR223W MEP3P53390 489 aa3.53□□□□□ -1.84
UBP8YMR223W CRN1Q06440 651 aa3.53□□□□□ -1.84
UBP8YMR223W IMP2'P32351 346 aa3.53□□□□□ -1.85
UBP8YMR223W ECM10P39987 644 aa3.53□□□□□ -1.85
UBP8YMR223W HIS6P40545 261 aa3.53□□□□□ -1.85
UBP8YMR223W YTP1P53584 459 aa3.53□□□□□ -1.85
UBP8YMR223W RCF1Q03713 159 aa3.53□□□□□ -1.85
UBP8YMR223W SPC19Q03954 165 aa3.53□□□□□ -1.85
UBP8YMR223W HCR1Q05775 265 aaKnown RBP3.53□□□□□ -1.85
UBP8YMR223W STP3Q05937 343 aa3.53□□□□□ -1.85
UBP8YMR223W YDL218WQ07629 317 aa3.53□□□□□ -1.85
UBP8YMR223W SDH5Q08230 162 aa3.53□□□□□ -1.85
UBP8YMR223W CEX1Q12453 761 aa3.53□□□□□ -1.85
UBP8YMR223W HSP82P02829 709 aaKnown RBP3.52□□□□□ -1.85
UBP8YMR223W TIF3P34167 436 aaKnown RBP3.52□□□□□ -1.85
UBP8YMR223W PEX5P35056 612 aa3.52□□□□□ -1.85
UBP8YMR223W SPC34P36131 295 aa3.52□□□□□ -1.85
UBP8YMR223W NOP4P37838 685 aaKnown RBP3.52□□□□□ -1.85
UBP8YMR223W RRP3P38712 501 aaKnown RBP3.52□□□□□ -1.85
UBP8YMR223W FAA2P39518 744 aa3.52□□□□□ -1.85
UBP8YMR223W GPD2P41911 440 aaKnown RBP3.52□□□□□ -1.85
UBP8YMR223W TIM11P81449 96 aaPredicted RBP3.52□□□□□ -1.85
UBP8YMR223W NUP100Q02629 959 aa3.52□□□□□ -1.85
UBP8YMR223W RSM28Q03430 361 aa3.52□□□□□ -1.85
UBP8YMR223W TRS130Q03660 1102 aa3.52□□□□□ -1.85
UBP8YMR223W PGC1Q08959 321 aa3.52□□□□□ -1.85
UBP8YMR223W MRS3P10566 314 aa3.51□□□□□ -1.85
UBP8YMR223W ERG1P32476 496 aaKnown RBP3.51□□□□□ -1.85
UBP8YMR223W LOS1P33418 1100 aaPredicted RBP3.51□□□□□ -1.85
UBP8YMR223W MIA40P36046 403 aa3.51□□□□□ -1.85
UBP8YMR223W ACA1P39970 489 aa3.51□□□□□ -1.85
UBP8YMR223W TMA108P40462 946 aa3.51□□□□□ -1.85
UBP8YMR223W ATP22P50273 684 aaPredicted RBP3.51□□□□□ -1.85
UBP8YMR223W YGL242CP53066 181 aa3.51□□□□□ -1.85
UBP8YMR223W CSR1Q06705 408 aaKnown RBP3.51□□□□□ -1.85
UBP8YMR223W YEH2Q07950 538 aa3.51□□□□□ -1.85
UBP8YMR223W INO80P53115 1489 aa3.5□□□□□ -1.85
UBP8YMR223W YKL050CP35736 922 aa3.5□□□□□ -1.85
UBP8YMR223W ESL2P36168 1195 aa3.5□□□□□ -1.85
UBP8YMR223W YBP1P38315 674 aa3.5□□□□□ -1.85
UBP8YMR223W SEC27P41811 889 aaKnown RBP3.5□□□□□ -1.85
UBP8YMR223W SWP82P43554 623 aa3.5□□□□□ -1.85
UBP8YMR223W YPI1P43587 155 aa3.5□□□□□ -1.85
UBP8YMR223W YJL132WP47014 750 aa3.5□□□□□ -1.85
UBP8YMR223W SGM1P47166 707 aa3.5□□□□□ -1.85
UBP8YMR223W YDL186WP48568 277 aa3.5□□□□□ -1.85
UBP8YMR223W GTR1Q00582 310 aa3.5□□□□□ -1.85
UBP8YMR223W CIA1Q05583 330 aa3.5□□□□□ -1.85
UBP8YMR223W SGT2Q12118 346 aaKnown RBP3.5□□□□□ -1.85
UBP8YMR223W SPT7P35177 1332 aa3.5□□□□□ -1.85
UBP8YMR223W ATP2P00830 511 aaKnown RBP3.49□□□□□ -1.85
UBP8YMR223W MSS18P08593 268 aa3.49□□□□□ -1.85
UBP8YMR223W RAD51P25454 400 aa3.49□□□□□ -1.85
UBP8YMR223W SWH1P35845 1188 aa3.49□□□□□ -1.85
UBP8YMR223W POP2P39008 433 aa3.49□□□□□ -1.85
UBP8YMR223W SPC72P39723 622 aa3.49□□□□□ -1.85
UBP8YMR223W IST1P53843 298 aaPredicted RBP3.49□□□□□ -1.85
UBP8YMR223W RPM2Q02773 1202 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms