RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C APL4Q12028 832 aa3.94□□□□□ -1.78
SSO2YMR183C FRE7Q12333 620 aa3.94□□□□□ -1.78
SSO2YMR183C CEX1Q12453 761 aa3.94□□□□□ -1.78
SSO2YMR183C VCX1Q99385 411 aa3.94□□□□□ -1.78
SSO2YMR183C KOG1P38873 1557 aa3.93□□□□□ -1.78
SSO2YMR183C POT1P27796 417 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
SSO2YMR183C MSP1P28737 362 aa3.93□□□□□ -1.78
SSO2YMR183C RIB7P33312 244 aa3.93□□□□□ -1.78
SSO2YMR183C UBP13P38187 747 aa3.93□□□□□ -1.78
SSO2YMR183C RTT105P40063 208 aa3.93□□□□□ -1.78
SSO2YMR183C ROK1P45818 564 aaPredicted RBP3.93□□□□□ -1.78
SSO2YMR183C LCL3P53153 274 aa3.93□□□□□ -1.78
SSO2YMR183C TIM11P81449 96 aaPredicted RBP3.93□□□□□ -1.78
SSO2YMR183C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
SSO2YMR183C BSP1Q06604 576 aa3.93□□□□□ -1.78
SSO2YMR183C FMP45Q07651 309 aa3.93□□□□□ -1.78
SSO2YMR183C AIM6Q07716 390 aa3.93□□□□□ -1.78
SSO2YMR183C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
SSO2YMR183C PCL8Q08966 492 aa3.93□□□□□ -1.78
SSO2YMR183C GPM3Q12326 303 aa3.93□□□□□ -1.78
SSO2YMR183C ERG27Q12452 347 aaKnown RBP3.93□□□□□ -1.78
SSO2YMR183C AFI1Q99222 893 aa3.93□□□□□ -1.78
SSO2YMR183C SEC3P33332 1336 aaKnown RBP3.93□□□□□ -1.78
SSO2YMR183C YML002WP0CF17 737 aa3.92□□□□□ -1.78
SSO2YMR183C YPK1P12688 680 aaKnown RBP3.92□□□□□ -1.78
SSO2YMR183C PAP1P29468 568 aaKnown RBP3.92□□□□□ -1.78
SSO2YMR183C CDC5P32562 705 aa3.92□□□□□ -1.78
SSO2YMR183C TFB1P32776 642 aa3.92□□□□□ -1.78
SSO2YMR183C MAL33P38157 468 aa3.92□□□□□ -1.78
SSO2YMR183C GND1P38720 489 aaKnown RBP3.92□□□□□ -1.78
SSO2YMR183C YIL161WP40449 235 aaKnown RBP3.92□□□□□ -1.78
SSO2YMR183C EFM4P40516 257 aa3.92□□□□□ -1.78
SSO2YMR183C BPL1P48445 690 aaPredicted RBP3.92□□□□□ -1.78
SSO2YMR183C YGR066CP53242 292 aa3.92□□□□□ -1.78
SSO2YMR183C TOF1P53840 1238 aa3.92□□□□□ -1.78
SSO2YMR183C YML037CQ03703 340 aa3.92□□□□□ -1.78
SSO2YMR183C GRX3Q03835 250 aa3.92□□□□□ -1.78
SSO2YMR183C HEL2Q05580 639 aaKnown RBP3.92□□□□□ -1.78
SSO2YMR183C STP3Q05937 343 aa3.92□□□□□ -1.78
SSO2YMR183C CDC45Q08032 650 aa3.92□□□□□ -1.78
SSO2YMR183C CRT10Q08226 957 aa3.92□□□□□ -1.78
SSO2YMR183C TCO89Q08921 799 aa3.92□□□□□ -1.78
SSO2YMR183C SPE3Q12074 293 aaKnown RBP3.92□□□□□ -1.78
SSO2YMR183C RGT2Q12300 763 aa3.92□□□□□ -1.78
SSO2YMR183C RDL1Q12305 139 aaKnown RBP3.92□□□□□ -1.78
SSO2YMR183C CET1O13297 549 aaPredicted RBP3.91□□□□□ -1.78
SSO2YMR183C DFR1P07807 211 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
SSO2YMR183C SPB1P25582 841 aaPredicted RBP3.91□□□□□ -1.78
SSO2YMR183C PRP45P28004 379 aaPredicted RBP3.91□□□□□ -1.78
SSO2YMR183C URA7P28274 579 aaKnown RBP3.91□□□□□ -1.78
SSO2YMR183C PRE2P30656 287 aaKnown RBP3.91□□□□□ -1.78
SSO2YMR183C GYP6P32806 458 aa3.91□□□□□ -1.78
SSO2YMR183C SIF2P38262 535 aa3.91□□□□□ -1.78
SSO2YMR183C VID24P38263 362 aa3.91□□□□□ -1.78
SSO2YMR183C OTU2P38747 307 aaKnown RBP3.91□□□□□ -1.78
SSO2YMR183C YHR054CP38780 354 aa3.91□□□□□ -1.78
SSO2YMR183C AFG3P39925 761 aa3.91□□□□□ -1.78
SSO2YMR183C SLZ1P40167 298 aa3.91□□□□□ -1.78
SSO2YMR183C MET28P40573 187 aa3.91□□□□□ -1.78
SSO2YMR183C SNO3P43544 222 aa3.91□□□□□ -1.78
SSO2YMR183C TCB2P48231 1178 aa3.91□□□□□ -1.78
SSO2YMR183C YNR068CP53754 272 aa3.91□□□□□ -1.78
SSO2YMR183C STP1Q00947 519 aa3.91□□□□□ -1.78
SSO2YMR183C ROY1Q04847 553 aa3.91□□□□□ -1.78
SSO2YMR183C YLR456WQ06199 204 aa3.91□□□□□ -1.78
SSO2YMR183C LUC7Q07508 261 aaPredicted RBP3.91□□□□□ -1.78
SSO2YMR183C MLH2Q07980 695 aa3.91□□□□□ -1.78
SSO2YMR183C SGT2Q12118 346 aaKnown RBP3.91□□□□□ -1.78
SSO2YMR183C SKS1Q12505 502 aa3.91□□□□□ -1.78
SSO2YMR183C YJR112W-AQ3E743 109 aa3.91□□□□□ -1.78
SSO2YMR183C PNO1Q99216 274 aaKnown RBP3.91□□□□□ -1.78
SSO2YMR183C CPR2P23285 205 aa3.9□□□□□ -1.79
SSO2YMR183C PHO84P25297 587 aaKnown RBP3.9□□□□□ -1.79
SSO2YMR183C YJU2P28320 278 aaPredicted RBP3.9□□□□□ -1.79
SSO2YMR183C SSE1P32589 693 aaKnown RBP3.9□□□□□ -1.79
SSO2YMR183C SDH8P38345 138 aa3.9□□□□□ -1.79
SSO2YMR183C IDS2P46958 469 aa3.9□□□□□ -1.79
SSO2YMR183C INN1P53901 409 aa3.9□□□□□ -1.79
SSO2YMR183C ERG13P54839 491 aaKnown RBP3.9□□□□□ -1.79
SSO2YMR183C MUB1Q03162 620 aa3.9□□□□□ -1.79
SSO2YMR183C ARX1Q03862 593 aaKnown RBP3.9□□□□□ -1.79
SSO2YMR183C SPH1Q06160 661 aa3.9□□□□□ -1.79
SSO2YMR183C BUD7Q08754 746 aa3.9□□□□□ -1.79
SSO2YMR183C ATG29Q12092 213 aa3.9□□□□□ -1.79
SSO2YMR183C AHA1Q12449 350 aaKnown RBP3.9□□□□□ -1.79
SSO2YMR183C CTF3Q12748 733 aa3.9□□□□□ -1.79
SSO2YMR183C ERV1P27882 189 aa3.89□□□□□ -1.79
SSO2YMR183C KES1P35844 434 aaKnown RBP3.89□□□□□ -1.79
SSO2YMR183C AUR1P36107 401 aaPredicted RBP3.89□□□□□ -1.79
SSO2YMR183C CST26P38226 397 aa3.89□□□□□ -1.79
SSO2YMR183C MTG2P38860 518 aa3.89□□□□□ -1.79
SSO2YMR183C SEC27P41811 889 aaKnown RBP3.89□□□□□ -1.79
SSO2YMR183C COS12P53053 380 aa3.89□□□□□ -1.79
SSO2YMR183C YNL092WP53934 400 aa3.89□□□□□ -1.79
SSO2YMR183C RSC9Q03124 581 aa3.89□□□□□ -1.79
SSO2YMR183C MTG1Q03151 367 aaPredicted RBP3.89□□□□□ -1.79
SSO2YMR183C GTB1Q04924 702 aa3.89□□□□□ -1.79
SSO2YMR183C HRD3Q05787 833 aa3.89□□□□□ -1.79
SSO2YMR183C SWA2Q06677 668 aa3.89□□□□□ -1.79
SSO2YMR183C YEH1Q07804 573 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms