RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C GDA1P32621 518 aa4.87□□□□□ -1.63
NUP116YMR047C LIP5P32875 414 aa4.87□□□□□ -1.63
NUP116YMR047C SRX1P36077 127 aa4.87□□□□□ -1.63
NUP116YMR047C YHR078WP38799 552 aa4.87□□□□□ -1.63
NUP116YMR047C SAW1P39735 261 aa4.87□□□□□ -1.63
NUP116YMR047C YCK3P39962 524 aa4.87□□□□□ -1.63
NUP116YMR047C YER189WP40104 122 aa4.87□□□□□ -1.63
NUP116YMR047C YIL054WP40524 105 aa4.87□□□□□ -1.63
NUP116YMR047C RTS2P40962 232 aa4.87□□□□□ -1.63
NUP116YMR047C LOC1P43586 204 aaPredicted RBP4.87□□□□□ -1.63
NUP116YMR047C HLJ1P48353 224 aa4.87□□□□□ -1.63
NUP116YMR047C VMA10P48836 114 aaKnown RBP4.87□□□□□ -1.63
NUP116YMR047C MAL11P53048 616 aa4.87□□□□□ -1.63
NUP116YMR047C AIM14P53109 570 aa4.87□□□□□ -1.63
NUP116YMR047C PCL10P53124 433 aa4.87□□□□□ -1.63
NUP116YMR047C SIW14P53965 281 aa4.87□□□□□ -1.63
NUP116YMR047C SLT2Q00772 484 aa4.87□□□□□ -1.63
NUP116YMR047C ARP10Q04549 284 aa4.87□□□□□ -1.63
NUP116YMR047C YLR177WQ06251 628 aa4.87□□□□□ -1.63
NUP116YMR047C SYO1Q07395 620 aa4.87□□□□□ -1.63
NUP116YMR047C YLR046CQ12253 270 aa4.87□□□□□ -1.63
NUP116YMR047C COX3P00420 269 aa4.86□□□□□ -1.63
NUP116YMR047C RPS6AP0CX37 236 aaKnown RBP4.86□□□□□ -1.63
NUP116YMR047C RPS6BP0CX38 236 aaPredicted RBP4.86□□□□□ -1.63
NUP116YMR047C DMC1P25453 334 aa4.86□□□□□ -1.63
NUP116YMR047C OXP1P28273 1286 aa4.86□□□□□ -1.63
NUP116YMR047C UTH1P36135 365 aa4.86□□□□□ -1.63
NUP116YMR047C MRPL37P36532 105 aa4.86□□□□□ -1.63
NUP116YMR047C PFS1P38872 237 aa4.86□□□□□ -1.63
NUP116YMR047C SCS2P40075 244 aaKnown RBP4.86□□□□□ -1.63
NUP116YMR047C STR2P47164 639 aa4.86□□□□□ -1.63
NUP116YMR047C VEL1P53058 206 aa4.86□□□□□ -1.63
NUP116YMR047C PEF1P53238 335 aa4.86□□□□□ -1.63
NUP116YMR047C GOR1P53839 350 aa4.86□□□□□ -1.63
NUP116YMR047C SPC24Q04477 213 aa4.86□□□□□ -1.63
NUP116YMR047C TPO1Q07824 586 aa4.86□□□□□ -1.63
NUP116YMR047C YPR089WO13585 888 aa4.86□□□□□ -1.63
NUP116YMR047C KSS1P14681 368 aa4.86□□□□□ -1.63
NUP116YMR047C DBF2P22204 572 aa4.86□□□□□ -1.63
NUP116YMR047C UBA1P22515 1024 aaKnown RBP4.86□□□□□ -1.63
NUP116YMR047C MTC2P34246 357 aa4.86□□□□□ -1.63
NUP116YMR047C TDP1P38319 544 aa4.86□□□□□ -1.63
NUP116YMR047C LSM12P38828 187 aaKnown RBP4.86□□□□□ -1.63
NUP116YMR047C ELO3P40319 345 aa4.86□□□□□ -1.63
NUP116YMR047C STB2P46679 850 aa4.86□□□□□ -1.63
NUP116YMR047C ASG7P46993 209 aa4.86□□□□□ -1.63
NUP116YMR047C RPM2Q02773 1202 aa4.86□□□□□ -1.63
NUP116YMR047C PIR1Q03178 341 aa4.86□□□□□ -1.63
NUP116YMR047C ADY3Q07732 790 aa4.86□□□□□ -1.63
NUP116YMR047C YOR289WQ12012 251 aaPredicted RBP4.86□□□□□ -1.63
NUP116YMR047C HAA1Q12753 694 aaKnown RBP4.86□□□□□ -1.63
NUP116YMR047C MDM35O60200 86 aa4.85□□□□□ -1.63
NUP116YMR047C HIS1P00498 297 aaKnown RBP4.85□□□□□ -1.63
NUP116YMR047C GLK1P17709 500 aaKnown RBP4.85□□□□□ -1.63
NUP116YMR047C GEX1P25596 615 aa4.85□□□□□ -1.63
NUP116YMR047C VPS21P36017 210 aaKnown RBP4.85□□□□□ -1.63
NUP116YMR047C GEX2P36173 615 aa4.85□□□□□ -1.63
NUP116YMR047C PCH2P38126 564 aa4.85□□□□□ -1.63
NUP116YMR047C KTR4P38131 464 aa4.85□□□□□ -1.63
NUP116YMR047C PEX13P80667 386 aa4.85□□□□□ -1.63
NUP116YMR047C PPN1Q04119 674 aa4.85□□□□□ -1.63
NUP116YMR047C NDE2Q07500 545 aa4.85□□□□□ -1.63
NUP116YMR047C RSC58Q07979 502 aa4.85□□□□□ -1.63
NUP116YMR047C REX3Q12090 404 aa4.85□□□□□ -1.63
NUP116YMR047C AVL9Q12500 764 aa4.85□□□□□ -1.63
NUP116YMR047C REP1P03871 373 aa4.85□□□□□ -1.63
NUP116YMR047C MET16P18408 261 aaPredicted RBP4.85□□□□□ -1.63
NUP116YMR047C TRX1P22217 103 aaKnown RBP4.85□□□□□ -1.63
NUP116YMR047C CAP1P28495 268 aaKnown RBP4.85□□□□□ -1.63
NUP116YMR047C DBF4P32325 704 aa4.85□□□□□ -1.63
NUP116YMR047C AFR1P33304 620 aa4.85□□□□□ -1.63
NUP116YMR047C ADD66P36040 267 aa4.85□□□□□ -1.63
NUP116YMR047C SRP68P38687 599 aaKnown RBP4.85□□□□□ -1.63
NUP116YMR047C UME6P39001 836 aa4.85□□□□□ -1.63
NUP116YMR047C FCY21P40039 528 aa4.85□□□□□ -1.63
NUP116YMR047C YIL001WP40560 513 aa4.85□□□□□ -1.63
NUP116YMR047C FET5P43561 622 aa4.85□□□□□ -1.63
NUP116YMR047C SIP4P46954 829 aa4.85□□□□□ -1.63
NUP116YMR047C GLG2P47011 380 aa4.85□□□□□ -1.63
NUP116YMR047C DAN4P47179 1161 aa4.85□□□□□ -1.63
NUP116YMR047C TRF5P48561 642 aaKnown RBP4.85□□□□□ -1.63
NUP116YMR047C NMT1P14743 455 aa4.85□□□□□ -1.63
NUP116YMR047C HSE1P38753 452 aa4.85□□□□□ -1.63
NUP116YMR047C GID8P40208 455 aa4.85□□□□□ -1.63
NUP116YMR047C CWC25P53854 179 aaKnown RBP4.85□□□□□ -1.63
NUP116YMR047C MMT1Q03218 510 aa4.85□□□□□ -1.63
NUP116YMR047C GLO2Q05584 274 aa4.85□□□□□ -1.63
NUP116YMR047C NUT2Q06213 157 aa4.85□□□□□ -1.63
NUP116YMR047C GTT2Q12390 233 aa4.85□□□□□ -1.63
NUP116YMR047C EFG1Q3E705 233 aaKnown RBP4.85□□□□□ -1.63
NUP116YMR047C TEC1P18412 486 aa4.84□□□□□ -1.63
NUP116YMR047C ERG6P25087 383 aaKnown RBP4.84□□□□□ -1.63
NUP116YMR047C GUT1P32190 709 aa4.84□□□□□ -1.63
NUP116YMR047C HEM12P32347 362 aaPredicted RBP4.84□□□□□ -1.63
NUP116YMR047C SRB4P32569 687 aa4.84□□□□□ -1.63
NUP116YMR047C UTP11P34247 250 aaPredicted RBP4.84□□□□□ -1.63
NUP116YMR047C SPT10P35208 640 aa4.84□□□□□ -1.63
NUP116YMR047C YKL063CP35725 167 aa4.84□□□□□ -1.63
NUP116YMR047C COS111P38308 924 aa4.84□□□□□ -1.63
NUP116YMR047C MCX1P38323 520 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms