RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeast

Gene BER1, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BER1	YLR412W	IES5	P40060	125 aa		3	□□□□□ -1.93
BER1	YLR412W	RGI2	P40188	164 aa		3	□□□□□ -1.93
BER1	YLR412W	STR3	P53101	465 aa	Known RBP	3	□□□□□ -1.93
BER1	YLR412W	APL4	Q12028	832 aa		3	□□□□□ -1.93
BER1	YLR412W	DAP1	Q12091	152 aa		3	□□□□□ -1.93
BER1	YLR412W	INP53	Q12271	1107 aa		3	□□□□□ -1.93
BER1	YLR412W	RPB2	P08518	1224 aa	Known RBP	2.99	□□□□□ -1.93
BER1	YLR412W	PMS1	P14242	873 aa		2.99	□□□□□ -1.93
BER1	YLR412W	PDA1	P16387	420 aa	Known RBP	2.99	□□□□□ -1.93
BER1	YLR412W	MRP20	P32387	263 aa		2.99	□□□□□ -1.93
BER1	YLR412W	SLC1	P33333	303 aa		2.99	□□□□□ -1.93
BER1	YLR412W	YKL050C	P35736	922 aa		2.99	□□□□□ -1.93
BER1	YLR412W	ALY1	P36117	915 aa		2.99	□□□□□ -1.93
BER1	YLR412W	KTR3	P38130	404 aa	Predicted RBP	2.99	□□□□□ -1.93
BER1	YLR412W	BUR6	P40096	142 aa		2.99	□□□□□ -1.93
BER1	YLR412W	MUB1	Q03162	620 aa		2.99	□□□□□ -1.93
BER1	YLR412W	ATG16	Q03818	150 aa		2.99	□□□□□ -1.93
BER1	YLR412W	SNO4	Q04902	237 aa		2.99	□□□□□ -1.93
BER1	YLR412W	RDR1	Q08904	546 aa		2.99	□□□□□ -1.93
BER1	YLR412W	HSP33	Q08914	237 aa	Known RBP	2.99	□□□□□ -1.93
BER1	YLR412W	HSP32	Q08992	237 aa		2.99	□□□□□ -1.93
BER1	YLR412W	SNF3	P10870	884 aa		2.98	□□□□□ -1.93
BER1	YLR412W	SPE2	P21182	396 aa		2.98	□□□□□ -1.93
BER1	YLR412W	SNU114	P36048	1008 aa	Known RBP	2.98	□□□□□ -1.93
BER1	YLR412W	AXL2	P38928	823 aa		2.98	□□□□□ -1.93
BER1	YLR412W	UIP3	P39547	235 aa		2.98	□□□□□ -1.93
BER1	YLR412W	YER010C	P40011	234 aa		2.98	□□□□□ -1.93
BER1	YLR412W	SLZ1	P40167	298 aa		2.98	□□□□□ -1.93
BER1	YLR412W	YGR021W	P53212	290 aa		2.98	□□□□□ -1.93
BER1	YLR412W	PIL1	P53252	339 aa	Known RBP	2.98	□□□□□ -1.93
BER1	YLR412W	SOL4	P53315	255 aa		2.98	□□□□□ -1.93
BER1	YLR412W	TMA64	Q04600	565 aa	Known RBP	2.98	□□□□□ -1.93
BER1	YLR412W	RCO1	Q04779	684 aa		2.98	□□□□□ -1.93
BER1	YLR412W	SKG3	Q06315	1026 aa		2.98	□□□□□ -1.93
BER1	YLR412W	PSR2	Q07949	397 aa		2.98	□□□□□ -1.93
BER1	YLR412W	MCM4	P30665	933 aa	Known RBP	2.97	□□□□□ -1.93
BER1	YLR412W	ERG1	P32476	496 aa	Known RBP	2.97	□□□□□ -1.93
BER1	YLR412W	PHD1	P36093	366 aa		2.97	□□□□□ -1.93
BER1	YLR412W	MIC60	P36112	540 aa		2.97	□□□□□ -1.93
BER1	YLR412W	DIA4	P38705	446 aa	Predicted RBP	2.97	□□□□□ -1.93
BER1	YLR412W	YER130C	P39959	443 aa		2.97	□□□□□ -1.93
BER1	YLR412W	FMP10	P40098	244 aa		2.97	□□□□□ -1.93
BER1	YLR412W	YJL068C	P40363	299 aa		2.97	□□□□□ -1.93
BER1	YLR412W	GUF1	P46943	645 aa		2.97	□□□□□ -1.93
BER1	YLR412W	RPS7B	P48164	190 aa	Known RBP	2.97	□□□□□ -1.93
BER1	YLR412W	INN1	P53901	409 aa		2.97	□□□□□ -1.93
BER1	YLR412W	INA17	Q02888	182 aa		2.97	□□□□□ -1.93
BER1	YLR412W	EMI2	Q04409	500 aa	Known RBP	2.97	□□□□□ -1.93
BER1	YLR412W	YOL087C	Q99247	1116 aa		2.97	□□□□□ -1.93
BER1	YLR412W	PRO3	P32263	286 aa	Known RBP	2.96	□□□□□ -1.94
BER1	YLR412W	SPC34	P36131	295 aa		2.96	□□□□□ -1.94
BER1	YLR412W	UBA4	P38820	440 aa		2.96	□□□□□ -1.94
BER1	YLR412W	RPS10B	P46784	105 aa	Known RBP	2.96	□□□□□ -1.94
BER1	YLR412W	TDA7	P53882	636 aa	Predicted RBP	2.96	□□□□□ -1.94
BER1	YLR412W	ZDS2	P54786	942 aa		2.96	□□□□□ -1.94
BER1	YLR412W	ROT2	P38138	954 aa		2.95	□□□□□ -1.94
BER1	YLR412W	TSC10	P38342	320 aa		2.95	□□□□□ -1.94
BER1	YLR412W	DHH1	P39517	506 aa	Known RBP	2.95	□□□□□ -1.94
BER1	YLR412W	KAP123	P40069	1113 aa	Known RBP	2.95	□□□□□ -1.94
BER1	YLR412W	AXL1	P40851	1208 aa		2.95	□□□□□ -1.94
BER1	YLR412W	DIM1	P41819	318 aa	Known RBP	2.95	□□□□□ -1.94
BER1	YLR412W	MSS11	Q03825	758 aa		2.95	□□□□□ -1.94
BER1	YLR412W	FMP45	Q07651	309 aa		2.95	□□□□□ -1.94
BER1	YLR412W	PSR1	Q07800	427 aa		2.95	□□□□□ -1.94
BER1	YLR412W	RPS10A	Q08745	105 aa	Predicted RBP	2.95	□□□□□ -1.94
BER1	YLR412W	NKP1	Q12493	238 aa		2.95	□□□□□ -1.94
BER1	YLR412W	ARG81	P05085	880 aa		2.94	□□□□□ -1.94
BER1	YLR412W	MRS3	P10566	314 aa		2.94	□□□□□ -1.94
BER1	YLR412W	ACH1	P32316	526 aa		2.94	□□□□□ -1.94
BER1	YLR412W	PDB1	P32473	366 aa	Known RBP	2.94	□□□□□ -1.94
BER1	YLR412W	RRP3	P38712	501 aa	Known RBP	2.94	□□□□□ -1.94
BER1	YLR412W	DBP8	P38719	431 aa		2.94	□□□□□ -1.94
BER1	YLR412W	KRE9	P39005	276 aa		2.94	□□□□□ -1.94
BER1	YLR412W	ELO1	P39540	310 aa		2.94	□□□□□ -1.94
BER1	YLR412W	SGM1	P47166	707 aa		2.94	□□□□□ -1.94
BER1	YLR412W	AAD10	P47182	288 aa		2.94	□□□□□ -1.94
BER1	YLR412W	DIA3	P52290	468 aa		2.94	□□□□□ -1.94
BER1	YLR412W	VMS1	Q04311	632 aa	Known RBP	2.94	□□□□□ -1.94
BER1	YLR412W	RBA50	Q04418	439 aa		2.94	□□□□□ -1.94
BER1	YLR412W	ECM30	Q06673	1274 aa		2.94	□□□□□ -1.94
BER1	YLR412W	SSK1	Q07084	712 aa		2.94	□□□□□ -1.94
BER1	YLR412W	GRC3	Q07845	632 aa		2.94	□□□□□ -1.94
BER1	YLR412W	NBP2	Q12163	236 aa		2.94	□□□□□ -1.94
BER1	YLR412W	PDH1	Q12428	516 aa	Known RBP	2.94	□□□□□ -1.94
BER1	YLR412W	PUT2	P07275	575 aa		2.93	□□□□□ -1.94
BER1	YLR412W	PWP1	P21304	576 aa	Known RBP	2.93	□□□□□ -1.94
BER1	YLR412W	SNC1	P31109	117 aa		2.93	□□□□□ -1.94
BER1	YLR412W	CBF2	P32504	956 aa		2.93	□□□□□ -1.94
BER1	YLR412W	RRN3	P36070	627 aa		2.93	□□□□□ -1.94
BER1	YLR412W	VPS24	P36095	224 aa	Known RBP	2.93	□□□□□ -1.94
BER1	YLR412W	YNG2	P38806	282 aa	Known RBP	2.93	□□□□□ -1.94
BER1	YLR412W	YJR061W	P40355	935 aa		2.93	□□□□□ -1.94
BER1	YLR412W	PYK2	P52489	506 aa	Known RBP	2.93	□□□□□ -1.94
BER1	YLR412W	CBK1	P53894	756 aa		2.93	□□□□□ -1.94
BER1	YLR412W	DIC1	Q06143	298 aa		2.93	□□□□□ -1.94
BER1	YLR412W	RIX7	Q07844	837 aa	Known RBP	2.93	□□□□□ -1.94
BER1	YLR412W	ENT4	Q07872	247 aa		2.93	□□□□□ -1.94
BER1	YLR412W	YEH2	Q07950	538 aa		2.93	□□□□□ -1.94
BER1	YLR412W	LEU9	Q12166	604 aa	Known RBP	2.93	□□□□□ -1.94
BER1	YLR412W	ARP6	Q12509	438 aa		2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms