RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C UIP3P39547 235 aa4.05□□□□□ -1.76
SMD3YLR147C SIP4P46954 829 aa4.05□□□□□ -1.76
SMD3YLR147C STR3P53101 465 aaKnown RBP4.05□□□□□ -1.76
SMD3YLR147C YMR317WQ04893 1140 aa4.05□□□□□ -1.76
SMD3YLR147C SKG3Q06315 1026 aa4.05□□□□□ -1.76
SMD3YLR147C ATG26Q06321 1198 aa4.05□□□□□ -1.76
SMD3YLR147C BSC1Q12140 328 aa4.05□□□□□ -1.76
SMD3YLR147C TAH18Q12181 623 aa4.05□□□□□ -1.76
SMD3YLR147C TRX2P22803 104 aaKnown RBP4.04□□□□□ -1.76
SMD3YLR147C GID7P25569 745 aa4.04□□□□□ -1.76
SMD3YLR147C RPN2P32565 945 aaKnown RBP4.04□□□□□ -1.76
SMD3YLR147C YKL050CP35736 922 aa4.04□□□□□ -1.76
SMD3YLR147C DIA4P38705 446 aaPredicted RBP4.04□□□□□ -1.76
SMD3YLR147C YNG2P38806 282 aaKnown RBP4.04□□□□□ -1.76
SMD3YLR147C AAD10P47182 288 aa4.04□□□□□ -1.76
SMD3YLR147C YLR352WQ06479 807 aa4.04□□□□□ -1.76
SMD3YLR147C SSP2Q08646 371 aa4.04□□□□□ -1.76
SMD3YLR147C APL4Q12028 832 aa4.04□□□□□ -1.76
SMD3YLR147C PWP1P21304 576 aaKnown RBP4.03□□□□□ -1.76
SMD3YLR147C PDB1P32473 366 aaKnown RBP4.03□□□□□ -1.76
SMD3YLR147C UBA4P38820 440 aa4.03□□□□□ -1.76
SMD3YLR147C BUR6P40096 142 aa4.03□□□□□ -1.76
SMD3YLR147C YJR061WP40355 935 aa4.03□□□□□ -1.76
SMD3YLR147C CUL3P53202 744 aa4.03□□□□□ -1.76
SMD3YLR147C CBK1P53894 756 aa4.03□□□□□ -1.76
SMD3YLR147C LCB1P25045 558 aaKnown RBP4.02□□□□□ -1.77
SMD3YLR147C KTR3P38130 404 aaPredicted RBP4.02□□□□□ -1.77
SMD3YLR147C ANS1P38832 159 aa4.02□□□□□ -1.77
SMD3YLR147C CCT4P39078 528 aaKnown RBP4.02□□□□□ -1.77
SMD3YLR147C RGI2P40188 164 aa4.02□□□□□ -1.77
SMD3YLR147C DPH1P40487 425 aaKnown RBP4.02□□□□□ -1.77
SMD3YLR147C YIR014WP40570 242 aa4.02□□□□□ -1.77
SMD3YLR147C YGL260WP53056 76 aa4.02□□□□□ -1.77
SMD3YLR147C RTT109Q07794 436 aa4.02□□□□□ -1.77
SMD3YLR147C RIX7Q07844 837 aaKnown RBP4.02□□□□□ -1.77
SMD3YLR147C NBP2Q12163 236 aa4.02□□□□□ -1.77
SMD3YLR147C NKP1Q12493 238 aa4.02□□□□□ -1.77
SMD3YLR147C YMR230W-AQ3E7B5 62 aa4.02□□□□□ -1.77
SMD3YLR147C YOR111WQ99210 232 aa4.02□□□□□ -1.77
SMD3YLR147C FUM1P08417 488 aaKnown RBP4.01□□□□□ -1.77
SMD3YLR147C ERG7P38604 731 aa4.01□□□□□ -1.77
SMD3YLR147C RPS10BP46784 105 aaKnown RBP4.01□□□□□ -1.77
SMD3YLR147C RPS7BP48164 190 aaKnown RBP4.01□□□□□ -1.77
SMD3YLR147C SOL4P53315 255 aa4.01□□□□□ -1.77
SMD3YLR147C VIP1Q06685 1146 aaKnown RBP4.01□□□□□ -1.77
SMD3YLR147C PSR1Q07800 427 aa4.01□□□□□ -1.77
SMD3YLR147C ENT4Q07872 247 aa4.01□□□□□ -1.77
SMD3YLR147C RPS10AQ08745 105 aaPredicted RBP4.01□□□□□ -1.77
SMD3YLR147C SNF3P10870 884 aa4□□□□□ -1.77
SMD3YLR147C GLN3P18494 730 aa4□□□□□ -1.77
SMD3YLR147C SPE2P21182 396 aa4□□□□□ -1.77
SMD3YLR147C RER1P25560 188 aa4□□□□□ -1.77
SMD3YLR147C RGT1P32862 1170 aa4□□□□□ -1.77
SMD3YLR147C SPC34P36131 295 aa4□□□□□ -1.77
SMD3YLR147C TSC10P38342 320 aa4□□□□□ -1.77
SMD3YLR147C ELO1P39540 310 aa4□□□□□ -1.77
SMD3YLR147C YER130CP39959 443 aa4□□□□□ -1.77
SMD3YLR147C GUF1P46943 645 aa4□□□□□ -1.77
SMD3YLR147C SGM1P47166 707 aa4□□□□□ -1.77
SMD3YLR147C LYS4P49367 693 aaPredicted RBP4□□□□□ -1.77
SMD3YLR147C EMI2Q04409 500 aaKnown RBP4□□□□□ -1.77
SMD3YLR147C YTH1Q06102 208 aaPredicted RBP4□□□□□ -1.77
SMD3YLR147C FMP46P36141 133 aaKnown RBP3.99□□□□□ -1.77
SMD3YLR147C RIM2P38127 377 aa3.99□□□□□ -1.77
SMD3YLR147C AZF1P41696 914 aa3.99□□□□□ -1.77
SMD3YLR147C ARC1P46672 376 aaKnown RBP3.99□□□□□ -1.77
SMD3YLR147C RDR1Q08904 546 aa3.99□□□□□ -1.77
SMD3YLR147C CSR2Q12734 1121 aa3.99□□□□□ -1.77
SMD3YLR147C PHO2P07269 559 aa3.98□□□□□ -1.77
SMD3YLR147C PUT2P07275 575 aa3.98□□□□□ -1.77
SMD3YLR147C TRS65P32893 560 aa3.98□□□□□ -1.77
SMD3YLR147C PHD1P36093 366 aa3.98□□□□□ -1.77
SMD3YLR147C YJL070CP40361 888 aa3.98□□□□□ -1.77
SMD3YLR147C DIA3P52290 468 aa3.98□□□□□ -1.77
SMD3YLR147C PYK2P52489 506 aaKnown RBP3.98□□□□□ -1.77
SMD3YLR147C YDR415CQ04033 374 aaPredicted RBP3.98□□□□□ -1.77
SMD3YLR147C YPL272CQ08984 517 aa3.98□□□□□ -1.77
SMD3YLR147C ERG26P53199 349 aaKnown RBP3.97□□□□□ -1.77
SMD3YLR147C MEP3P53390 489 aa3.97□□□□□ -1.77
SMD3YLR147C BSC5P53755 489 aa3.97□□□□□ -1.77
SMD3YLR147C RAD30Q04049 632 aa3.97□□□□□ -1.77
SMD3YLR147C YKU80Q04437 629 aa3.97□□□□□ -1.77
SMD3YLR147C TMA64Q04600 565 aaKnown RBP3.97□□□□□ -1.77
SMD3YLR147C GRC3Q07845 632 aa3.97□□□□□ -1.77
SMD3YLR147C DAP1Q12091 152 aa3.97□□□□□ -1.77
SMD3YLR147C LEU9Q12166 604 aaKnown RBP3.97□□□□□ -1.77
SMD3YLR147C RPL19AP0CX82 189 aaKnown RBP3.96□□□□□ -1.78
SMD3YLR147C RPL19BP0CX83 189 aaPredicted RBP3.96□□□□□ -1.78
SMD3YLR147C CDC24P11433 854 aaPredicted RBP3.96□□□□□ -1.78
SMD3YLR147C RPS2P25443 254 aaKnown RBP3.96□□□□□ -1.78
SMD3YLR147C MCM4P30665 933 aaKnown RBP3.96□□□□□ -1.78
SMD3YLR147C SYN8P31377 255 aa3.96□□□□□ -1.78
SMD3YLR147C ERG1P32476 496 aaKnown RBP3.96□□□□□ -1.78
SMD3YLR147C DBP8P38719 431 aa3.96□□□□□ -1.78
SMD3YLR147C YSA1Q01976 231 aa3.96□□□□□ -1.78
SMD3YLR147C SKM1Q12469 655 aa3.96□□□□□ -1.78
SMD3YLR147C ARG81P05085 880 aa3.95□□□□□ -1.78
SMD3YLR147C PMS1P14242 873 aa3.95□□□□□ -1.78
SMD3YLR147C KGD1P20967 1014 aaKnown RBP3.95□□□□□ -1.78
SMD3YLR147C VMA16P23968 213 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms